Factsheet for VIT_12s0055g00820.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g15550.t01	Wine grape	extracellular	74.26	75.37
PGSC0003DMT400076556	Potato	extracellular, vacuole	72.78	72.18
Solyc01g104850.2.1	Tomato	extracellular, vacuole	72.57	71.97
Os11t0213600-01	Rice	plasma membrane	70.25	71.61
AT5G42240.1	Thale cress	vacuole	71.31	71.46
TraesCS4D01G103600.1	Wheat	vacuole	70.68	70.97
TraesCS4A01G202600.1	Wheat	vacuole	70.46	70.76
TraesCS4B01G106700.1	Wheat	vacuole	70.25	70.7
CDY66771	Canola	cytosol	16.88	69.57
AT2G12480.3	Thale cress	vacuole	67.93	68.8
TraesCS4B01G264700.1	Wheat	vacuole	68.14	68.58
Zm00001d004691_P001	Maize	vacuole	68.14	68.29
EES08376	Sorghum	endoplasmic reticulum, extracellular, vacuole	68.57	68.28
CDX80725	Canola	extracellular, vacuole	68.14	67.86
TraesCS4D01G264700.1	Wheat	vacuole	67.3	67.73
CDY48945	Canola	extracellular, vacuole	68.14	67.71
Bra034921.1-P	Field mustard	extracellular, vacuole	68.14	67.71
Bra013152.1-P	Field mustard	vacuole	66.46	67.6
AT5G42230.2	Thale cress	extracellular, vacuole	66.88	67.59
CDY70042	Canola	vacuole	63.71	67.26
AT1G43780.1	Thale cress	extracellular, vacuole	67.72	67.01
CDX93108	Canola	vacuole	63.29	66.82
CDX81435	Canola	cytosol	57.81	66.34
TraesCS4A01G043900.1	Wheat	vacuole	61.81	65.99
Bra040939.1-P	Field mustard	extracellular, vacuole	65.19	65.88
Bra037202.1-P	Field mustard	extracellular	64.98	65.67
Zm00001d049055_P001	Maize	vacuole	68.57	65.52
CDY23340	Canola	vacuole	63.92	64.61
HORVU4Hr1G016730.17	Barley	plastid	71.1	64.31
CDY66139	Canola	extracellular	65.4	63.79
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	59.28	63.72
Bra022715.1-P	Field mustard	extracellular	53.59	63.34
GSMUA_Achr6P29260_001	Banana	plasma membrane	62.66	62.79
GSMUA_Achr8P29460_001	Banana	vacuole	70.46	62.66
CDY37202	Canola	extracellular	59.7	62.06
VIT_08s0040g01140.t01	Wine grape	vacuole	46.2	48.34
VIT_01s0244g00100.t01	Wine grape	vacuole	45.78	46.87
VIT_17s0000g00370.t01	Wine grape	vacuole	44.51	45.67
VIT_08s0040g01060.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	41.56	45.08
VIT_08s0040g01110.t01	Wine grape	vacuole	41.77	44.59
VIT_08s0040g01130.t01	Wine grape	endoplasmic reticulum, vacuole	41.77	44.1
VIT_14s0108g00100.t01	Wine grape	extracellular, vacuole	42.62	42.17
VIT_14s0108g00110.t01	Wine grape	vacuole	44.51	38.36
VIT_08s0040g01070.t01	Wine grape	extracellular, vacuole	28.27	35.08
VIT_11s0037g00780.t01	Wine grape	plastid	13.08	29.38
VIT_08s0040g01040.t01	Wine grape	vacuole	40.51	24.15

Protein Annotations

EntrezGene:100245216	wikigene:100245216	MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase
ProteinID:CBI20040	ProteinID:CBI20040.3	UniProt:D7STC6	EMBL:FN595228	GO:GO:0003674	GO:GO:0003824
GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058
EntrezGene:LOC100245216	wikigene:LOC100245216	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802
PANTHER:PTHR11802:SF20	InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM
UniParc:UPI00015CBB37	ArrayExpress:VIT_12s0055g00820	EnsemblPlantsGene:VIT_12s0055g00820	EnsemblPlants:VIT_12s0055g00820.t01	RefSeq:XP_002268397	RefSeq:XP_002268397.1
SEG:seg	:	:	:	:	:

Description

Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:D7STC6]

Coordinates

chr12:-:14127382..14132040

Molecular Weight (calculated)

53056.1 Da

IEP (calculated)

7.069

GRAVY (calculated)

-0.168

Length

474 amino acids

Sequence
(BLAST)

001: MASGWSWDRA FVGVVLLLCD VCGAANNGWP EEDLVVRLPG QPKVGFRQFG GYVDVDEKAG RSMFYYFVEA EEDPQNKPLT LWLNGGPGCS SVGGGAFTAL
101: GPFFPKGHSR GVRRNSKSWN KVSNLLFVES PAGVGWSYSN TSADYNCGDA STASDMLTFM LKWFKKFPGY KLRPLFLTGE SYAGHYIPQL ANVLLDYNKK
201: SKDFKFNIKG VAIGNPLLQL DRDVPAVYEF FWSHGMISDE VGLAIMNDCN FEDYTFSGTH NVSTECSTAL NDAYSIVGSY INPYDVILDV CYPSIVQQEL
301: RLRKVVTKIS IGVDVCMTAE RTFYFNLPEV QKALHANRTN LPYHWTTCSN ILFYNEGDSN LDMLPLLKRI LQDKIPVWIF SGDQDSVVPL MGSRTLVREL
401: AKDLNFQHTV PYGAWFHKGQ VGGWQTEYGN LLTFATVRGA AHMVSYSQPS RALHLFATFI HGRRLPNNTR PSID

Best Arabidopsis Sequence Match ( AT5G42240.1 )
(BLAST)

001: MASVSWRAVA VAMVVVLLSL QWFAKGYPEE DLVVRLPGQP TVGFKQYAGY VDVDVKAGRS LFYYYVEAVK QPDSKPLTLW LNGGPGCSSI GGGAFTELGP
101: FYPTGDGRGL RVNSMSWNKA SHLLFVESPA GVGWSYSNKS SDYNTGDKST ANDMLVFLLR WFEKFPKLKS RDLFLTGESY AGHYIPQLAD AILSYNSHSS
201: GFKFNIKGVA IGNPLLKLDR DSPATYEFFW SHGMISDELK LTITSQCDFD DYTFASPHNV STACNEAISE TENIITEYVN NYDVLLDVCY PSIVQQELRL
301: KKMATKMSMG VDVCMTYERR FYFNLPEVQK ALHANRTHLP YSWSMCSGVL NYSDIDGNID MLPILKRIIL NKTPIWIFSG DQDSVVPFGG SRTLVRELAQ
401: DLNFKTTVPY GAWFHKSQVG GWAIEYGKLL TFATVRGAAH MVPYAQPSRA LHLFSSFVSG RRLPNNTHSS TDE

Arabidopsis Description

SCPL42Serine carboxypeptidase-like 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH05]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.