Factsheet for VIT_08s0040g01140.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
vacuole 7
extracellular 4
endoplasmic reticulum 4
plasma membrane 4
golgi 4
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0244g00100.t01	Wine grape	vacuole	70.2	68.68
VIT_17s0000g00370.t01	Wine grape	vacuole	67.33	66.02
VIT_08s0040g01130.t01	Wine grape	endoplasmic reticulum, vacuole	62.91	63.47
VIT_08s0040g01060.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	58.72	60.87
VIT_08s0040g01110.t01	Wine grape	vacuole	58.94	60.14
VIT_08s0040g01070.t01	Wine grape	extracellular, vacuole	43.93	52.09
VIT_18s0001g15550.t01	Wine grape	extracellular	48.12	46.68
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	48.34	46.2
VIT_14s0108g00100.t01	Wine grape	extracellular, vacuole	48.34	45.72
VIT_14s0108g00110.t01	Wine grape	vacuole	48.12	39.64
GSMUA_Achr11P...	Banana	extracellular	7.95	36.36
VIT_08s0040g01040.t01	Wine grape	vacuole	60.71	34.59
VIT_11s0037g00780.t01	Wine grape	plastid	12.8	27.49

Protein Annotations

EntrezGene:100260104	wikigene:100260104	MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	ProteinID:CBI32794
ProteinID:CBI32794.3	UniProt:D7TQS4	EMBL:FN596008	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180
GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058	EntrezGene:LOC100260104
wikigene:LOC100260104	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	ScanProsite:PS00560	PANTHER:PTHR11802
PANTHER:PTHR11802:SF94	InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS	InterPro:Ser_caboxypep_ser_AS
UniParc:UPI0001BE3F8B	ArrayExpress:VIT_08s0040g01140	EnsemblPlantsGene:VIT_08s0040g01140	EnsemblPlants:VIT_08s0040g01140.t01	unigene:Vvi.17483	RefSeq:XP_002282852
RefSeq:XP_002282852.1	:	:	:	:	:

Description

Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:D7TQS4]

Coordinates

chr8:+:12150451..12157978

Molecular Weight (calculated)

50464.2 Da

IEP (calculated)

6.780

GRAVY (calculated)

-0.108

Length

453 amino acids

Sequence
(BLAST)

001: MATISAFLIQ ICLTVESPPS ADKIVSLPGQ PQVGFQQFAG YITVDEKQQR HLFYYFVEAE TDPASKPLVL WLNGGPGCSS IGAGAFCEHG PFKPSGEILV
101: NNDYSWNKVA NMLYLESPAG VGFSYSANTS FYAFVNDEMT ARDNLKFLQR WFLKFPEYKN RDLFLTGESY AGHYVPQLAQ LIVQSKVKFN LKGVAIGNPL
201: LEFNTDFNSR AEYMWSHGLI SDITYEAFTV ICNYSQVRRE IVMGSLSPAC SGVISQVSRE LGKHIDSYDV TLDVCLPSVV SQSERLNQPR GTEKIDVCVE
301: DETIKYLNRK DVQKALHAHL KGVSRWSICS EVLKYEYRNL EIPTIHVVGA VLKSGIRVLV YSGDQDSVVP LTGTRTLVNG LAKDLGLNTT VPYRNWFQGR
401: QVGGWTQVYG DKLSFATIRG ASHEAPFSQP ERSLVLFNTF LQGKPLPEAT VVL

Best Arabidopsis Sequence Match ( AT1G28110.1 )
(BLAST)

001: MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF
101: RPKGPILVKN QHSWNQEANM LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG HYVPQLAELM IQYNKKHHLF
201: NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN
301: QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT
401: SVPYRVWFAG QQVGGWTQVY GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F

Arabidopsis Description

SCPL45Serine carboxypeptidase-like 45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y09]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.