Factsheet for VIT_08s0040g01070.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0040g01130.t01	Wine grape	endoplasmic reticulum, vacuole	84.29	71.71
VIT_08s0040g01140.t01	Wine grape	vacuole	52.09	43.93
VIT_08s0040g01060.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	49.48	43.25
VIT_08s0040g01110.t01	Wine grape	vacuole	49.74	42.79
VIT_01s0244g00100.t01	Wine grape	vacuole	51.83	42.76
VIT_17s0000g00370.t01	Wine grape	vacuole	49.21	40.69
VIT_08s0040g01040.t01	Wine grape	vacuole	84.56	40.63
KRG95070	Soybean	vacuole	38.48	39.3
KRH66738	Soybean	nucleus	44.76	35.55
VIT_14s0108g00100.t01	Wine grape	extracellular, vacuole	35.6	28.39
VIT_12s0055g00820.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	35.08	28.27
VIT_18s0001g15550.t01	Wine grape	extracellular	34.29	28.05
VIT_14s0108g00110.t01	Wine grape	vacuole	34.55	24.0
GSMUA_Achr11P...	Banana	extracellular	5.76	22.22
VIT_11s0037g00780.t01	Wine grape	plastid	7.59	13.74

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	ProteinID:CCB57117	ProteinID:CCB57117.1	UniProt:F6HQN6
EMBL:FN596008	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180	GO:GO:0004185	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131
ScanProsite:PS00560	PANTHER:PTHR11802	PANTHER:PTHR11802:SF94	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS
InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM	UniParc:UPI000210937B	ArrayExpress:VIT_08s0040g01070	EnsemblPlantsGene:VIT_08s0040g01070	EnsemblPlants:VIT_08s0040g01070.t01

Description

Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:F6HQN6]

Coordinates

chr8:+:12098665..12104651

Molecular Weight (calculated)

42784.7 Da

IEP (calculated)

7.234

GRAVY (calculated)

-0.226

Length

382 amino acids

Sequence
(BLAST)

001: MQTQSWMMIL AAVCAALVHF CSSAVESHSA QADQISSLPG QPRVTRDNLV FLKNWFIKFP QYKNSELFIA GESYAGHFVP QLAQLILESR VKFNLKGILM
101: GNPLMDFDTN YNSVPHFYWS HGLISDSTYN LFSSKCNYSR MNREQTSGSL SPACLAVRSQ YSQEVGDSVD RFDVTLNSCL PSVDPQPQVT ENVDVCIGDE
201: VNKYFNREDV QKSLHARLVG VANWSMCSGA LRYNIKDKEI TMIPVMGSLV KSGIRTFVYS GDQDSVIPLF GTRTLVDGLA KELRLNTTVP YRNWFEGEQV
301: GGWTQVYGDI LSFATVRGGS HTVPGTQPAR VSVGAHFRVV LRSAQVSELA KEASVWPRWL ISDWGQGNKH FDGTWRSTYK EE

Best Arabidopsis Sequence Match ( AT1G28110.1 )
(BLAST)

001: MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF
101: RPKGPILVKN QHSWNQEANM LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG HYVPQLAELM IQYNKKHHLF
201: NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN
301: QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT
401: SVPYRVWFAG QQVGGWTQVY GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F

Arabidopsis Description

SCPL45Serine carboxypeptidase-like 45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y09]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.