Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 9
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G42240.1 | Thale cress | vacuole | 79.49 | 78.65 |
| Bra013152.1-P | Field mustard | vacuole | 76.07 | 76.39 |
| CDX93108 | Canola | vacuole | 73.08 | 76.17 |
| CDY70042 | Canola | vacuole | 72.65 | 75.72 |
| Bra040939.1-P | Field mustard | extracellular, vacuole | 74.36 | 74.2 |
| Bra037202.1-P | Field mustard | extracellular | 74.15 | 73.99 |
| CDX81435 | Canola | cytosol | 65.17 | 73.85 |
| CDY23340 | Canola | vacuole | 73.93 | 73.77 |
| AT5G42230.2 | Thale cress | extracellular, vacuole | 73.72 | 73.56 |
| CDY51660 | Canola | endoplasmic reticulum, extracellular, vacuole | 68.16 | 72.34 |
| CDY66139 | Canola | extracellular | 74.15 | 71.4 |
| Bra022715.1-P | Field mustard | extracellular | 60.26 | 70.32 |
| CDY37202 | Canola | extracellular | 68.16 | 69.96 |
| Os11t0213600-01 | Rice | plasma membrane | 67.95 | 68.39 |
| VIT_12s0055g00820.t01 | Wine grape | endoplasmic reticulum, extracellular, vacuole | 68.8 | 67.93 |
| CDY66771 | Canola | cytosol | 16.67 | 67.83 |
| PGSC0003DMT400076556 | Potato | extracellular, vacuole | 68.59 | 67.15 |
| Solyc01g104850.2.1 | Tomato | extracellular, vacuole | 68.59 | 67.15 |
| AT1G43780.1 | Thale cress | extracellular, vacuole | 68.59 | 67.01 |
| TraesCS4A01G202600.1 | Wheat | vacuole | 67.09 | 66.53 |
| TraesCS4D01G103600.1 | Wheat | vacuole | 66.88 | 66.31 |
| TraesCS4B01G106700.1 | Wheat | vacuole | 66.67 | 66.24 |
| Zm00001d004691_P001 | Maize | vacuole | 66.45 | 65.75 |
| TraesCS4B01G264700.1 | Wheat | vacuole | 65.6 | 65.18 |
| EES08376 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 65.81 | 64.71 |
| TraesCS4D01G264700.1 | Wheat | vacuole | 64.74 | 64.33 |
| TraesCS4A01G043900.1 | Wheat | vacuole | 59.83 | 63.06 |
| Zm00001d049055_P001 | Maize | vacuole | 66.03 | 62.3 |
| HORVU4Hr1G016730.17 | Barley | plastid | 67.73 | 60.5 |
| GSMUA_Achr6P29260_001 | Banana | plasma membrane | 60.9 | 60.25 |
| GSMUA_Achr8P29460_001 | Banana | vacuole | 68.59 | 60.23 |
| AT2G33530.1 | Thale cress | extracellular, vacuole | 44.87 | 45.16 |
| AT1G28110.2 | Thale cress | vacuole | 44.44 | 45.12 |
| AT3G56540.1 | Thale cress | vacuole | 21.15 | 37.5 |
| AT3G52010.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 38.46 | 36.96 |
Protein Annotations
| MapMan:19.4.2.2 | Gene3D:3.40.50.12670 | Gene3D:3.40.50.1820 | EntrezGene:815721 | UniProt:A0A1P8AY06 | InterPro:AB_hydrolase |
| ProteinID:ANM61525.1 | ArrayExpress:AT2G12480 | EnsemblPlantsGene:AT2G12480 | RefSeq:AT2G12480 | TAIR:AT2G12480 | RefSeq:AT2G12480-TAIR-G |
| EnsemblPlants:AT2G12480.3 | Unigene:At.40719 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004180 | GO:GO:0004185 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:IPR029058 | RefSeq:NP_001323740.1 | PFAM:PF00450 | PRINTS:PR00724 | ScanProsite:PS00131 | PANTHER:PTHR11802 |
| PANTHER:PTHR11802:SF20 | InterPro:Peptidase_S10 | Symbol:SCPL43 | SUPFAM:SSF53474 | InterPro:Ser_caboxypep_ser_AS | SignalP:SignalP-noTM |
| UniParc:UPI000009D28F | SEG:seg | : | : | : | : |
Description
SCPL43serine carboxypeptidase-like 43 [Source:TAIR;Acc:AT2G12480]
Coordinates
chr2:-:5069544..5072656
Molecular Weight (calculated)
52839.1 Da
IEP (calculated)
6.628
GRAVY (calculated)
-0.151
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSSRAVVMA IMVLVTVQWL VFAEGYPEED LVARLPGQPN VGFRQFAGYV DVDSENGRSL FYYYVEAVKE PDTKPLTLWL NGGPGCSSVG GGAFTELGPF
101: YPTGDGRGLR LNSMSWNKAS NLLFVESPAG VGWSYSNRSS DYNTGDKSTV NDMLVFLLRW FNKFPELKSR DLFLTGESYA GHYIPQLADV ILSYNSRSSG
201: FKFNVKGIAI GNPLLKLDRD FAAAYEYFWS HGMISDEVRL TIMNQCDFAN PKNMSNACIY AIVESSVLTE YINSYHILLD VCYPSIVQQE LRLKKMVTKI
301: SMVVDVCITY ERSFYFNLPK VQNALHANRT RLPYEWTMCS NRLNYSGIDG YIDMLPSLKR IIQNQTPVWI FSGDQDSVIP LQSSRTLVRE LAEDLNFKTT
401: IPYGAWFHKE QVGGWVTEYG NLLTFATVRG AAHMVPYAEP SRALHMFSSF MNGRRLPNKP DLKSSTDD
101: YPTGDGRGLR LNSMSWNKAS NLLFVESPAG VGWSYSNRSS DYNTGDKSTV NDMLVFLLRW FNKFPELKSR DLFLTGESYA GHYIPQLADV ILSYNSRSSG
201: FKFNVKGIAI GNPLLKLDRD FAAAYEYFWS HGMISDEVRL TIMNQCDFAN PKNMSNACIY AIVESSVLTE YINSYHILLD VCYPSIVQQE LRLKKMVTKI
301: SMVVDVCITY ERSFYFNLPK VQNALHANRT RLPYEWTMCS NRLNYSGIDG YIDMLPSLKR IIQNQTPVWI FSGDQDSVIP LQSSRTLVRE LAEDLNFKTT
401: IPYGAWFHKE QVGGWVTEYG NLLTFATVRG AAHMVPYAEP SRALHMFSSF MNGRRLPNKP DLKSSTDD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.