Factsheet for Solyc01g010710.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 7
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 28847647
extracellular: 29876421

msms PMID: 28847647 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA. Electronic address: jabadia@eead.csic.es.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400002249	Potato	vacuole	92.45	91.33
PGSC0003DMT400002245	Potato	cytosol	44.69	90.12
Solyc01g010730.1.1	Tomato	extracellular, vacuole	16.12	85.87
Solyc01g010720.2.1	Tomato	cytosol	59.39	69.29
VIT_14s0108g00100.t01	Wine grape	extracellular, vacuole	60.2	61.59
VIT_14s0108g00110.t01	Wine grape	vacuole	59.39	52.91
Solyc01g104850.2.1	Tomato	extracellular, vacuole	43.27	44.35
Solyc03g118370.2.1	Tomato	extracellular	40.82	43.96
Solyc04g064760.2.1	Tomato	nucleus	41.22	43.25
Solyc10g054090.1.1	Tomato	extracellular	8.16	42.55

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004180	GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	InterPro:IPR029058
UniProt:K4ATR4	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	PANTHER:PTHR11802	PANTHER:PTHR11802:SF84
InterPro:Peptidase_S10	MEROPS:S10.005	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g010710.2
EnsemblPlants:Solyc01g010710.2.1	UniParc:UPI0002761CFB	:	:	:	:

Description

Carboxypeptidase [Source:UniProtKB/TrEMBL;Acc:K4ATR4]

Coordinates

chr1:-:5740284..5746099

Molecular Weight (calculated)

54983.9 Da

IEP (calculated)

6.940

GRAVY (calculated)

-0.166

Length

490 amino acids

Sequence
(BLAST)

001: MVPWLCIFFS YLLFYKSSCE LITSLPGQPP NIFFKQHSGY IVTNSQNGRA LFYYFVEADS ENATSLPLTL WLNGGPGCSS VGFGVFMEHG PFQPGKDGRL
101: IKNKYSWNLE SNMLYVESPI GVGFSYSNTS SDYVNWDDVA TAKENLQFLL NWLEKFPEYR NLDLFLAGES YAGHYIPQLT VLLLDYNRKP NVKPIKLKSI
201: ALGNPLLDLE ISVKSSEYLW SHGAISDELL TMKRTICNET RLLLESIHHN MSNECSKVWD LTNEEMGSDT DTGDLLAPIC VSSGVAGQLG VLGKLASIHE
301: KDVREIGDPC LTDRIYMYLN KPEVQKALHA NTTHLPYAWD FCLGHLQYQR GDLAINVIPL LSNILKENIQ VLLYSGDQDT KIPLTQTRKI AKLLARDLKL
401: VALDKYGPWY DGLQIGGWSQ SFGGVREGKN VTYLTFATIR GAAHEVPYTS PSQALTLFRT FLKGQSPSRK NNTIRAKKLH SSIDLFSTAI

Best Arabidopsis Sequence Match ( AT1G28110.1 )
(BLAST)

001: MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF
101: RPKGPILVKN QHSWNQEANM LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG HYVPQLAELM IQYNKKHHLF
201: NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN
301: QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT
401: SVPYRVWFAG QQVGGWTQVY GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F

Arabidopsis Description

SCPL45Serine carboxypeptidase-like 45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y09]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.