CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21525	Canola	vacuole	23.33	49.49
KRH02406	Soybean	cytosol	40.24	48.84
CDY68103	Canola	vacuole	22.38	48.45
CDY34806	Canola	vacuole	9.05	31.67
CDY46627	Canola	vacuole	32.86	30.4
CDY17183	Canola	endoplasmic reticulum, vacuole	33.33	30.3
CDY61693	Canola	vacuole	32.86	30.26
CDX76846	Canola	vacuole	8.57	30.25
CDY19500	Canola	vacuole	33.33	30.24
CDY11750	Canola	endoplasmic reticulum, vacuole	33.1	30.15
CDX93108	Canola	vacuole	32.14	30.07
CDY51660	Canola	endoplasmic reticulum, extracellular, vacuole	31.43	29.93
CDY70042	Canola	vacuole	31.67	29.62
CDX90124	Canola	vacuole	32.38	29.57
CDY23340	Canola	vacuole	32.86	29.42
CDX81435	Canola	cytosol	28.57	29.06
CDX80725	Canola	extracellular, vacuole	31.67	27.94
CDY48945	Canola	extracellular, vacuole	31.67	27.88
CDY65614	Canola	extracellular, vacuole	19.29	27.84
CDY21526	Canola	peroxisome	19.29	27.55
CDY66139	Canola	extracellular	31.67	27.37
CDY37202	Canola	extracellular	29.29	26.97
CDY66771	Canola	cytosol	1.9	6.96

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	GO:A0A078HN64	UniProt:A0A078HN64	InterPro:AB_hydrolase
EnsemblPlants:CDY39011	ProteinID:CDY39011	ProteinID:CDY39011.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004180
GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0016787
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00067118001	InterPro:IPR029058	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131
PANTHER:PTHR11802	PANTHER:PTHR11802:SF25	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM
UniParc:UPI0004EE325D	SEG:seg	:	:	:	:

Description

BnaC01g34750DCarboxypeptidase [Source:UniProtKB/TrEMBL;Acc:A0A078HN64]

Coordinates

chrLK032438:+:144777..147092

Molecular Weight (calculated)

48352.9 Da

IEP (calculated)

7.726

GRAVY (calculated)

-0.369

Length

420 amino acids

Sequence
(BLAST)

001: MDLTHPRRKL NFLLIISLLL LSLRHQDYNV EAQNSDKVVN LPEQPSNPKI SHFSGYVNVN QENTRALFFW FFEALSEAPT RPLVLWLNGG PGCSSIGYGA
101: ASELGPFRVV ENGTSLRFNQ YSWVQEANML FLESPVGVGF SYTNTSSDLD NLNDSFVAED AYNFMVAWFA RYPRYKSRDF FIAGESYAGH YAPQLAEQIY
201: DRNKVKSKES FINLKGFIVG NPLTDDEYDN KGILEYAWSH AVISDNLYDT AKRNCDFKSS NWSEPCNVAM NTMFQKYKEI DIYNIYAPKC TTSNSSAASF
301: LGVFNKSPAM KDWFKRVRWF EGYDPCYSDY AEKYFNRVDV RTSLHASTRD VSRWKVCNDS ILQTYQFTVS SMLPTYSKLI KAGLKIWVYR YDLHLSSSAI
401: CQRENTISCR FINLTKSLYT

Best Arabidopsis Sequence Match ( AT3G17180.1 )
(BLAST)

001: MNLTLPMKKQ KFLLIISLLI LLSLLHQDYH IEAQNSDKVV NLPEQPLNPK ISHFSGYVNV NQENTRSLFF WFFEALSESP STRPLVLWLN GGPGCSSIGY
101: GAASELGPFR VVENGTSLSF NQYSWVQEAN MLFLESPVGV GFSYTNSSSD LENLNDAFVA EDAYNFMVAW FARYPQYKSR DFFIAGESYA GHYSPQLAEL
201: IYDRNKVQPK DSFINLKGFI VGNPLTDDEY DNKGILEYAW SHAVISDHLY DSAKHNCDFK SSNWSEPCNV AMNTVFTKYK EIDIYNIYAP KCISNSSSGA
301: SYLGFGVNDK SPAVKDWFKR VRWFEGYDPC YSNYAEEYFN RVDVRLSLHA TTRNVARWKV CNDSILQTYH FTVSSMLPTY SKLIKAGLKI WVYSGDADGR
401: VPVIGSRYCV EALGISVKSE WRSWFHNHQV GGRITEYEGG LTFVTVRGAG HLVPLNKPEE ALALFRSFLN GQELPSSP

Arabidopsis Description

SCPL33Serine carboxypeptidase-like 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSM9]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.