Factsheet for TraesCS6D01G165200.2

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G205500.1	Wheat	vacuole	98.93	98.51
TraesCS6A01G179800.2	Wheat	vacuole	96.37	96.37
HORVU6Hr1G036510.10	Barley	extracellular, vacuole	96.37	95.75
Os11t0522900-01	Rice	vacuole	90.17	89.41
OQU83511	Sorghum	extracellular, plastid, vacuole	84.83	82.54
Zm00001d049276_P003	Maize	mitochondrion, vacuole	83.97	81.54
Zm00001d007372_P002	Maize	vacuole	82.69	77.71
GSMUA_Achr9P01080_001	Banana	extracellular, vacuole	76.71	76.87
GSMUA_Achr6P11030_001	Banana	vacuole	75.64	75.8
VIT_01s0244g00100.t01	Wine grape	vacuole	72.65	73.43
GSMUA_Achr10P...	Banana	vacuole	72.01	73.26
TraesCS2D01G285600.2	Wheat	vacuole	72.65	72.65
VIT_17s0000g00370.t01	Wine grape	vacuole	70.51	71.43
KRH00258	Soybean	vacuole	14.32	71.28
CDY46627	Canola	vacuole	69.02	71.15
Bra032875.1-P	Field mustard	vacuole	69.02	71.15
CDY61693	Canola	vacuole	68.8	70.61
AT1G28110.2	Thale cress	vacuole	69.23	70.28
KRH45206	Soybean	plasma membrane	69.02	70.07
KRH01514	Soybean	vacuole	68.8	69.85
PGSC0003DMT400074071	Potato	vacuole	67.52	69.3
Solyc03g118370.2.1	Tomato	extracellular	66.88	68.79
Bra010903.1-P	Field mustard	vacuole	67.52	68.7
CDX90124	Canola	vacuole	67.31	68.48
CDY19500	Canola	vacuole	67.73	68.47
PGSC0003DMT400036974	Potato	extracellular, vacuole	66.45	68.35
CDY11750	Canola	endoplasmic reticulum, vacuole	67.09	68.11
Bra005488.1-P	Field mustard	endoplasmic reticulum, vacuole	66.88	67.75
CDY17183	Canola	endoplasmic reticulum, vacuole	66.88	67.75
AT2G33530.1	Thale cress	extracellular, vacuole	66.88	67.31
KRH54117	Soybean	nucleus, vacuole	67.52	67.23
KRH41079	Soybean	vacuole	67.73	66.88
KRH63848	Soybean	nucleus	66.67	66.52
TraesCS4D01G264700.1	Wheat	vacuole	43.59	43.31
TraesCS4D01G103600.1	Wheat	vacuole	43.38	43.01
TraesCS2D01G090800.1	Wheat	vacuole	27.78	34.12

Protein Annotations

MapMan:19.4.2.2	Gene3D:3.40.50.12670	Gene3D:3.40.50.1820	InterPro:AB_hydrolase	GO:GO:0003674	GO:GO:0003824
GO:GO:0004185	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
InterPro:IPR029058	PFAM:PF00450	PRINTS:PR00724	ScanProsite:PS00131	ScanProsite:PS00560	PANTHER:PTHR11802
PANTHER:PTHR11802:SF109	InterPro:Peptidase_S10	SUPFAM:SSF53474	InterPro:Ser_caboxypep_his_AS	InterPro:Ser_caboxypep_ser_AS	SignalP:SignalP-noTM
EnsemblPlantsGene:TraesCS6D01G165200	EnsemblPlants:TraesCS6D01G165200.2	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:144468564..144471517

Molecular Weight (calculated)

51941.1 Da

IEP (calculated)

6.912

GRAVY (calculated)

-0.092

Length

468 amino acids

Sequence
(BLAST)

001: MPAPVCRCRP LAMAVLLLIA SLCHLGSCNG GAGGGRITRL PGQPEVNFGQ YSGYVEVDGK GSRALFYYFV EAELDPATKP LVLWLNGGPG CSSLGVGAFS
101: ENGPFRPSGQ ALVRNEYSWN KEANVIYLET PAGVGFSYSA DAAYYQGVND NMTAMDNMVF MQRWLEKFPQ YKGRELYISG ESYAGHYIPQ LAEVMVEFNK
201: KDNIFNLKGL ALGNPVLHFT TDFNSRAEYF WSHGLISDST YRIFTSVCNY SRYVSEYYGG SLSPLCARVM NQVTRETSRF VDKYDVTLDV CLSSVLSQSM
301: ILSPHKRVGH RIDVCVEDET VNYLNRKDVQ EALHAKLIGV KKWAVCSSVL EYELLNLQIP TINIVGSLVN SGIRVLVYSG DQDSVIPLTG SRTLVQNLAR
401: DLGLKTSIPY RVWFEGKQVG GWTQVYGEEL SFATIRGASH EAPFSQPERS LVLIRAFLQG RPLPETFS

Best Arabidopsis Sequence Match ( AT1G28110.1 )
(BLAST)

001: MSPLQWLTIS FALIIFHSLT VSSSVLSHSD RVTRLPGQPR VGFQQYSGYV TVDDKKQRAL FYYFAEAETN PSSKPLVLWL NGGPGCSSLG VGAFSENGPF
101: RPKGPILVKN QHSWNQEANM LYLETPVGVG FSYSTQSSHY EGVNDKITAR DNLVFLQRWF LKFPHYLNRS LFITGESYAG HYVPQLAELM IQYNKKHHLF
201: NLRGIAIGNP VLEFATDFNS RAEYFWSHGL ISDSTYKMFT SYCNYSRYVS EYYRGSMSSM CSKVMSQVST ETSRFVDKYD VTLDVCIPSV LSQSKVVSPN
301: QVGESVDVCV EDETVNYLNR RDVQEALHAR LIGVREWTVC SNVLDYQLLD VEIPTINIVG SLVKAGVPVL VYSGDQDSVI PLTGSRTLVS RLAKQLGLRT
401: SVPYRVWFAG QQVGGWTQVY GNVLSFATVR GASHEVPFSQ PERSLVLFKA FLDGHPLPEE F

Arabidopsis Description

SCPL45Serine carboxypeptidase-like 45 [Source:UniProtKB/Swiss-Prot;Acc:Q93Y09]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.