Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016623.1-P | Field mustard | extracellular | 96.67 | 96.67 |
| CDY40009 | Canola | endoplasmic reticulum, extracellular, vacuole | 78.89 | 75.53 |
| CDX81792 | Canola | extracellular | 77.78 | 74.47 |
| CDY21771 | Canola | extracellular | 77.78 | 74.47 |
| CDY35133 | Canola | endoplasmic reticulum, extracellular, vacuole | 77.78 | 74.47 |
| AT1G16950.1 | Thale cress | extracellular | 72.22 | 69.89 |
Protein Annotations
| EnsemblPlants:CDX96798 | EnsemblPlantsGene:GSBRNA2T00103031001 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0006995 | GO:GO:0007154 |
| GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0009991 | InterPro:CEP13/CEP14 |
| PANTHER:PTHR37180 | ProteinID:CDX96798 | ProteinID:CDX96798.1 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EBDDF4 |
| MapMan:11.10.1.1.1 | : | : | : | : | : |
Description
BnaA08g23410D
Coordinates
chrLK031895:-:1009058..1009330
Molecular Weight (calculated)
9682.9 Da
IEP (calculated)
8.509
GRAVY (calculated)
0.033
Length
90 amino acids
Sequence
(BLAST)
(BLAST)
1: MACPRVSILT ICLLLFVVGF ASQPCEARKV LMPYNASKGL FLSALPKGNV PPSGPSDKGH TFQPEDYLDK HMVPEIHRQL GSVPSPGVGH
1: MARPRISISM ICLLILIVGF VLQSSQARKV LVPYGTSKGL FLSALPKGNV PPSGPSDKGH TSPPDDTDQR MVPENSPEIY RRLESVPSPG VGH
Arabidopsis Description
CEP13Precursor of CEP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ54]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.