Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 6
- vacuole 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35133 | Canola | endoplasmic reticulum, extracellular, vacuole | 97.87 | 97.87 |
| CDY21771 | Canola | extracellular | 80.85 | 80.85 |
| CDX81792 | Canola | extracellular | 79.79 | 79.79 |
| CDX96798 | Canola | extracellular | 75.53 | 78.89 |
| AT1G16950.1 | Thale cress | extracellular | 75.53 | 76.34 |
Protein Annotations
| MapMan:11.10.1.1.1 | UniProt:A0A078HRU9 | EnsemblPlants:CDY40009 | ProteinID:CDY40009 | ProteinID:CDY40009.1 | InterPro:CEP13/CEP14 |
| GO:GO:0006950 | GO:GO:0006970 | GO:GO:0006995 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0009605 |
| GO:GO:0009628 | GO:GO:0009987 | GO:GO:0009991 | EnsemblPlantsGene:GSBRNA2T00068906001 | PFscan:PS51257 | PANTHER:PTHR37180 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEF835 | : | : | : |
Description
BnaC05g13060DBnaC05g13060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRU9]
Coordinates
chrLK032462:-:90733..91017
Molecular Weight (calculated)
10005.2 Da
IEP (calculated)
8.496
GRAVY (calculated)
-0.099
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MAHPRIPIST ICLLLCIVGF VSQSCEARKV VMPYDASKGL FLSVLPKGNV PPSGPSDKGH TSPPKDYSDQ HMVQGNSLEI YRQLGSVPSP GVGN
1: MARPRISISM ICLLILIVGF VLQSSQARKV LVPYGTSKGL FLSALPKGNV PPSGPSDKGH TSPPDDTDQR MVPENSPEIY RRLESVPSPG VGH
Arabidopsis Description
CEP13Precursor of CEP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ54]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.