Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026696.1-P | Field mustard | nucleus | 67.02 | 100.0 |
| CDX81792 | Canola | extracellular | 95.74 | 95.74 |
| AT1G16950.1 | Thale cress | extracellular | 81.91 | 82.8 |
| CDY40009 | Canola | endoplasmic reticulum, extracellular, vacuole | 80.85 | 80.85 |
| CDY35133 | Canola | endoplasmic reticulum, extracellular, vacuole | 79.79 | 79.79 |
| CDX96798 | Canola | extracellular | 74.47 | 77.78 |
Protein Annotations
| EnsemblPlants:CDY21771 | EnsemblPlantsGene:GSBRNA2T00016282001 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0006995 | GO:GO:0007154 |
| GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0009991 | InterPro:CEP13/CEP14 |
| PANTHER:PTHR37180 | PFscan:PS51257 | ProteinID:CDY21771 | ProteinID:CDY21771.1 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EEE3C6 | UniProt:A0A078G8R3 | MapMan:11.10.1.1.1 | : | : |
Description
BnaA09g45220DBnaA09g45220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G8R3]
Coordinates
chrLK032123:-:650325..650609
Molecular Weight (calculated)
10012.2 Da
IEP (calculated)
8.743
GRAVY (calculated)
0.045
Length
94 amino acids
Sequence
(BLAST)
(BLAST)
1: MARVRISISI ICLLILIVGF VSQSCEARKV LMPYGASKGL FLSALPKGNV PPSAPSDKGH TSPPEDYSDH HTVPEISPEI YRRLGSVPSP GVGN
1: MARPRISISM ICLLILIVGF VLQSSQARKV LVPYGTSKGL FLSALPKGNV PPSGPSDKGH TSPPDDTDQR MVPENSPEIY RRLESVPSPG VGH
Arabidopsis Description
CEP13Precursor of CEP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ54]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.