Factsheet for Bra016623.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96798	Canola	extracellular	96.67	96.67
Bra026696.1-P	Field mustard	nucleus	54.44	77.78
Bra026013.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	74.44	71.28
AT1G16950.1	Thale cress	extracellular	71.11	68.82

Protein Annotations

EnsemblPlants:Bra016623.1	EnsemblPlants:Bra016623.1-P	EnsemblPlantsGene:Bra016623	GO:GO:0006950	GO:GO:0006970	GO:GO:0006995
GO:GO:0007154	GO:GO:0008150	GO:GO:0009605	GO:GO:0009628	GO:GO:0009987	GO:GO:0009991
InterPro:CEP13/CEP14	PANTHER:PTHR37180	SignalP:SignalP-noTM	UniParc:UPI00025456D1	UniProt:M4DJE5	MapMan:11.10.1.1.1

Description

AT1G16950 (E=3e-030) | unknown protein

Coordinates

chrA08:-:19325256..19325528

Molecular Weight (calculated)

9622.8 Da

IEP (calculated)

8.089

GRAVY (calculated)

-0.001

Length

90 amino acids

Sequence
(BLAST)

1: MACPRVSILT ICLLLFVVGF ASQPCEARNV LMPYNATKGL FLSALPKGNV PPSGPSDKGH TSQPEDYLDK HMVPEIHRQL GSVPSPGVGH

Best Arabidopsis Sequence Match ( AT1G16950.1 )
(BLAST)

1: MARPRISISM ICLLILIVGF VLQSSQARKV LVPYGTSKGL FLSALPKGNV PPSGPSDKGH TSPPDDTDQR MVPENSPEIY RRLESVPSPG VGH

Arabidopsis Description

CEP13Precursor of CEP13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ54]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.