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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, vacuole
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:vacuole
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX97739
CDY30157

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 CDX97739 AT3G16310.1 21798944
AT3G21690.1 CDY30157 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 97.27 99.8
CDY33131 Canola golgi, plasma membrane, vacuole 34.18 99.43
CDY33130 Canola cytosol, peroxisome, vacuole 58.59 97.4
CDY39494 Canola cytosol, peroxisome, plasma membrane 93.16 92.8
CDY19294 Canola cytosol, peroxisome, plasma membrane 92.97 92.61
CDY24250 Canola cytosol, peroxisome, plasma membrane 57.03 92.11
CDY69153 Canola cytosol, peroxisome, plasma membrane 57.03 92.11
CDX92916 Canola cytosol, plasma membrane, vacuole 90.62 91.88
CDY19295 Canola cytosol, peroxisome, plasma membrane 53.91 90.79
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 89.65 90.71
CDY33129 Canola cytosol, peroxisome, plasma membrane 89.26 90.5
CDY39493 Canola cytosol, peroxisome, plasma membrane 85.55 87.08
CDY65669 Canola cytosol, peroxisome, plasma membrane 83.98 86.87
GSMUA_Achr6P00360_001 Banana vacuole 62.89 79.12
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 74.22 75.55
KRH26788 Soybean plasma membrane 73.63 74.8
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 70.51 74.59
KRH56125 Soybean plasma membrane 74.61 73.89
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 72.66 73.37
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 72.46 73.18
Solyc12g005850.1.1 Tomato plasma membrane 73.05 73.05
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 73.83 72.55
EER91319 Sorghum cytosol, peroxisome, plasma membrane 69.92 71.17
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 69.14 71.08
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 68.95 70.74
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 67.97 70.73
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 67.77 70.53
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 68.36 70.42
Os03t0572900-01 Rice plasma membrane 68.75 70.4
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 67.77 70.39
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 70.51 70.37
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 68.16 70.36
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 68.55 70.34
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 69.92 70.33
KRH25385 Soybean plasma membrane 60.55 70.29
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 68.16 70.22
KXG38133 Sorghum cytosol, peroxisome, vacuole 70.7 70.16
Zm00001d033063_P001 Maize vacuole 68.36 70.0
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 68.16 69.94
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 67.77 69.82
Zm00001d013809_P002 Maize plasma membrane 67.77 69.82
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 69.73 69.73
VIT_12s0059g02160.t01 Wine grape plasma membrane 70.12 69.71
Os03t0571900-01 Rice plasma membrane 70.7 69.62
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 67.77 69.54
GSMUA_Achr9P11610_001 Banana plasma membrane 67.19 69.49
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 67.97 69.46
TraesCS3D01G506100.1 Wheat plasma membrane 67.38 69.28
TraesCS3A01G499200.1 Wheat plasma membrane 67.19 69.08
KXG37120 Sorghum plasma membrane 67.97 68.91
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 68.36 68.9
TraesCS3B01G562400.2 Wheat plasma membrane 66.99 68.88
EER91321 Sorghum plasma membrane 66.41 67.86
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 69.92 67.8
GSMUA_Achr4P23760_001 Banana plasma membrane 60.74 67.61
PGSC0003DMT400022543 Potato plasma membrane 68.95 67.37
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 67.38 67.25
Zm00001d021629_P003 Maize plasma membrane 67.38 67.25
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 65.43 67.0
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 66.8 66.67
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 66.41 66.41
TraesCSU01G124400.1 Wheat plasma membrane, plastid 64.65 66.2
TraesCS4B01G388800.1 Wheat plasma membrane 64.26 65.93
TraesCS5A01G553200.1 Wheat plasma membrane 64.06 65.73
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 66.21 65.7
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 64.26 65.02
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 46.88 64.86
CDY07257 Canola endoplasmic reticulum, vacuole 41.41 64.83
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 64.65 64.4
CDY64933 Canola plasma membrane 63.48 64.36
EER93896 Sorghum cytosol, peroxisome, plasma membrane 65.62 64.12
CDY12916 Canola cytosol, plasma membrane, vacuole 62.5 63.87
CDY19507 Canola cytosol, plasma membrane, vacuole 62.3 63.67
TraesCS2B01G247700.2 Wheat plasma membrane 60.94 63.29
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 61.13 63.1
TraesCS2A01G222300.1 Wheat plasma membrane 60.55 62.88
TraesCS2D01G228200.1 Wheat plasma membrane 60.55 62.88
TraesCS3B01G485100.1 Wheat plasma membrane 67.58 62.79
CDY25329 Canola plasma membrane 60.74 62.08
CDY47166 Canola plasma membrane 60.55 61.88
CDY34637 Canola plasma membrane 55.47 61.87
CDY34833 Canola plasma membrane 55.47 61.87
HORVU2Hr1G046420.16 Barley plasma membrane 59.38 61.54
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 58.79 61.05
Zm00001d006493_P001 Maize plasma membrane 67.58 60.7
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 59.96 60.2
CDX76391 Canola plasma membrane 58.59 59.76
CDX79109 Canola plasma membrane 58.01 59.76
CDY27434 Canola plasma membrane 58.4 59.56
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 65.43 58.77
CDY27431 Canola plasma membrane 58.01 58.58
CDX94063 Canola plasma membrane 57.81 58.38
CDX98712 Canola plasma membrane 57.81 58.38
CDY64820 Canola plasma membrane 59.18 58.05
CDX94061 Canola peroxisome, plasma membrane, vacuole 57.23 57.79
CDX98711 Canola peroxisome, plasma membrane, vacuole 57.03 57.59
CDX76392 Canola plasma membrane 51.76 57.48
CDX94064 Canola plasma membrane 46.09 57.0
CDX98713 Canola plasma membrane 50.0 56.26
Zm00001d006494_P004 Maize plasma membrane 61.33 55.38
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 69.14 51.45
CDY06731 Canola cytosol, peroxisome, plasma membrane 45.7 48.35
CDY17070 Canola cytosol, peroxisome, plasma membrane 45.51 48.14
CDY01224 Canola plasma membrane 31.25 47.48
CDX67772 Canola plasma membrane 46.48 46.94
CDX69834 Canola plasma membrane 43.55 46.85
CDX98344 Canola plasma membrane 46.09 46.55
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 16.6 46.2
CDX83628 Canola plasma membrane 35.35 46.06
CDY26602 Canola cytosol, peroxisome, vacuole 45.9 45.28
CDX83627 Canola cytosol, peroxisome, plasma membrane 44.34 45.13
CDY16041 Canola cytosol, peroxisome, vacuole 45.7 45.09
CDX81281 Canola plasma membrane 42.58 45.04
CDY44967 Canola plasma membrane 35.35 45.02
CDY21076 Canola cytosol, peroxisome, plasma membrane 45.51 44.89
CDY34598 Canola cytosol, peroxisome, vacuole 45.51 44.89
CDX81176 Canola plasma membrane 42.77 44.88
CDX78379 Canola peroxisome, plasma membrane, vacuole 40.43 44.81
CDY13643 Canola cytosol, peroxisome, plasma membrane 43.95 44.73
CDY33962 Canola plasma membrane 27.73 44.38
CDY40095 Canola plasma membrane 42.19 44.35
CDX97005 Canola plasma membrane 41.99 44.15
CDX69835 Canola plasma membrane 41.8 43.94
CDX93794 Canola plasma membrane 41.99 43.61
CDX85764 Canola plasma membrane 42.19 43.2
CDX97001 Canola plasma membrane 41.41 43.18
CDY40093 Canola plasma membrane 42.19 43.03
CDY08798 Canola cytosol, peroxisome, plasma membrane 26.76 42.68
CDX78378 Canola plasma membrane 40.23 42.47
CDY70471 Canola cytosol, peroxisome, plasma membrane 25.0 42.24
CDY14558 Canola plasma membrane 26.56 42.24
CDX81172 Canola plasma membrane 39.84 42.06
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 44.34 41.8
CDX89406 Canola plasma membrane 41.8 41.8
CDX94432 Canola plasma membrane 41.41 41.49
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 43.95 41.44
CDX81174 Canola plasma membrane 32.81 41.38
CDY08796 Canola plasma membrane 42.58 40.22
CDY61495 Canola plasma membrane 42.58 40.0
CDY49481 Canola plasma membrane 33.59 39.36
CDY54720 Canola plasma membrane 42.58 38.79
CDY08797 Canola plasma membrane 42.19 38.23
CDY21177 Canola plasma membrane 37.11 38.15
CDY50654 Canola plasma membrane 37.11 38.08
CDY51758 Canola plasma membrane 37.11 38.08
CDY38453 Canola plasma membrane 29.49 37.94
CDY29945 Canola plasma membrane 36.52 37.55
CDX92726 Canola nucleus, peroxisome, plasma membrane 40.62 34.78
CDY50190 Canola nucleus, peroxisome, plasma membrane 40.62 34.49
CDY16896 Canola plasma membrane 32.81 33.87
CDX84047 Canola plasma membrane 39.45 28.69
CDX69836 Canola plasma membrane 41.21 20.57
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078HM05UniProt:A0A078HM05EnsemblPlants:CDY38631ProteinID:CDY38631ProteinID:CDY38631.1
ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00066329001InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF188TIGRFAMs:TIGR00797
TMHMM:TMhelixUniParc:UPI0004EF20C8SEG:seg:::
Description
BnaA05g19560DProtein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A078HM05]
Coordinates
chrLK032428:+:181127..187105
Molecular Weight (calculated)
55812.1 Da
IEP (calculated)
6.723
GRAVY (calculated)
0.746
Length
512 amino acids
Sequence
(BLAST)
001: MDSSQYDGVY QPLLYPPADG TVPLSPSTES SNGELERVLS DVETPLFHRL RKATMIESKL LFKLAAPAVI VYMINYLMSM STQIFSGHLG NLELAAASLG
101: NTGIQIFAYG LMLGMGSAVE TLCGQAFGGR KYEMLGIYLQ RSTVLLTLTG LLLTLIYIFS KPILLFLGES PEIASAASIF VYGLIPQIFA YAVNFPIQKF
201: LQAQSIVAPS AFISTATLFV HLFLSWLAVY KLGMGLLGAS LVLSLSWWII VVAQFVYIVT SERCCQTWRG FSVQAFSGLP SFFKLSAASA VMLCLETWYF
301: QILVLLAGLL ENPELALDSL SICMTISGWV FMISVGFNAA ISVRVSNELG AGNPKSAAFS VIIVNIYSLI TSVILAIVIL ACRDFLSYAF TEGKKVSVAV
401: SDLCPLLALT LVLNGIQPVL SGVAVGCGWQ AFVAKVNVGC YYIVGIPLGV IFGFYFKQYS LLGIWTGMIC GTLIQTVILA WVTFRTDWTK EVEEASKRLD
501: KWSNKKLEVV PE
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.