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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane, vacuole
Any Predictor:nucleus, peroxisome, plasma membrane, vacuole
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006059.1-P Field mustard plasma membrane 99.78 94.66
CDX81176 Canola plasma membrane 95.24 90.16
CDX81174 Canola plasma membrane 73.16 83.25
CDX69835 Canola plasma membrane 86.36 81.93
CDY40095 Canola plasma membrane 86.15 81.72
CDX97005 Canola plasma membrane 85.93 81.52
CDX78378 Canola plasma membrane 82.47 78.56
CDX81172 Canola plasma membrane 81.6 77.73
CDX97001 Canola plasma membrane 81.17 76.37
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 30.3 76.09
CDY40093 Canola plasma membrane 82.25 75.7
CDX85764 Canola plasma membrane 81.39 75.2
CDX69834 Canola plasma membrane 77.27 75.0
CDX81281 Canola plasma membrane 72.08 68.8
CDY33962 Canola plasma membrane 45.89 66.25
CDY70471 Canola cytosol, peroxisome, plasma membrane 42.86 65.35
CDY14558 Canola plasma membrane 45.24 64.91
GSMUA_Achr7P11770_001 Banana plasma membrane 60.17 64.8
CDY08798 Canola cytosol, peroxisome, plasma membrane 45.02 64.8
CDY61495 Canola plasma membrane 74.68 63.3
CDY08796 Canola plasma membrane 74.24 63.28
KRH74515 Soybean cytosol, peroxisome, plasma membrane 65.58 61.71
TraesCS5D01G254500.1 Wheat mitochondrion, plasma membrane 40.48 60.52
GSMUA_Achr8P18130_001 Banana mitochondrion, plasma membrane, vacuole 63.64 60.25
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 64.29 60.24
GSMUA_Achr3P21260_001 Banana plasma membrane 59.96 60.22
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 64.07 60.04
CDY54720 Canola plasma membrane 72.73 59.79
CDY08797 Canola plasma membrane 72.73 59.47
Zm00001d027982_P002 Maize cytosol, peroxisome, plasma membrane 61.47 58.44
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 61.26 57.29
TraesCS4A01G404500.1 Wheat cytosol, peroxisome, plasma membrane 61.04 56.97
GSMUA_Achr7P12820_001 Banana cytosol 53.03 56.58
TraesCS4B01G304300.1 Wheat cytosol, peroxisome, plasma membrane 60.61 56.57
TraesCS4D01G302500.1 Wheat cytosol, peroxisome, plasma membrane 60.61 56.57
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 58.23 55.93
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 61.04 55.84
TraesCS5B01G245500.1 Wheat plasma membrane 56.93 55.14
Os08t0480000-01 Rice plasma membrane 58.23 55.01
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 62.34 54.86
TraesCS5A01G247900.1 Wheat golgi, peroxisome, plasma membrane 56.49 54.83
Os09t0468000-01 Rice plasma membrane 56.49 54.15
TraesCS7D01G129700.1 Wheat plasma membrane 56.28 54.05
TraesCS5B01G245400.1 Wheat plasma membrane 54.98 53.93
Zm00001d050457_P002 Maize plasma membrane 56.28 53.83
GSMUA_Achr6P04190_001 Banana plasma membrane 50.22 53.7
TraesCS7A01G130300.1 Wheat plasma membrane 56.49 53.7
TraesCS5D01G254400.1 Wheat plasma membrane 54.55 53.5
TraesCS7B01G030600.1 Wheat plasma membrane 56.49 53.48
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 56.49 52.73
KXG35815 Sorghum plasma membrane 54.33 52.07
HORVU5Hr1G069900.5 Barley golgi 56.71 51.17
EER96893 Sorghum cytosol, peroxisome, vacuole 52.6 50.94
CDY01224 Canola plasma membrane 37.01 50.74
EER96891 Sorghum cytosol, peroxisome, plasma membrane 53.03 50.41
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 56.93 50.29
CDY33131 Canola golgi, plasma membrane, vacuole 18.61 48.86
CDY44967 Canola plasma membrane 41.13 47.26
CDY07257 Canola endoplasmic reticulum, vacuole 33.12 46.79
CDX93794 Canola plasma membrane 48.05 45.03
CDY06731 Canola cytosol, peroxisome, plasma membrane 46.1 44.01
CDY17070 Canola cytosol, peroxisome, plasma membrane 45.89 43.8
CDY33129 Canola cytosol, peroxisome, plasma membrane 45.67 41.78
CDY34637 Canola plasma membrane 41.34 41.61
CDX92916 Canola cytosol, plasma membrane, vacuole 45.45 41.58
CDY34833 Canola plasma membrane 40.69 40.96
CDY64933 Canola plasma membrane 44.59 40.79
CDX94432 Canola plasma membrane 45.02 40.7
CDY65669 Canola cytosol, peroxisome, plasma membrane 43.51 40.61
CDY19507 Canola cytosol, plasma membrane, vacuole 43.94 40.52
CDX89406 Canola plasma membrane 44.81 40.43
CDY38631 Canola cytosol, peroxisome, vacuole 44.81 40.43
CDY12916 Canola cytosol, plasma membrane, vacuole 43.72 40.32
CDY25329 Canola plasma membrane 43.72 40.32
CDY47166 Canola plasma membrane 43.72 40.32
CDY19294 Canola cytosol, peroxisome, plasma membrane 44.81 40.27
CDY39493 Canola cytosol, peroxisome, plasma membrane 43.72 40.16
CDY39494 Canola cytosol, peroxisome, plasma membrane 44.59 40.08
CDY21177 Canola plasma membrane 42.86 39.76
CDY29945 Canola plasma membrane 42.86 39.76
CDY50654 Canola plasma membrane 42.86 39.68
CDY51758 Canola plasma membrane 42.64 39.48
CDY38453 Canola plasma membrane 33.98 39.45
CDY13643 Canola cytosol, peroxisome, plasma membrane 42.86 39.36
CDX94061 Canola peroxisome, plasma membrane, vacuole 43.07 39.25
CDX98711 Canola peroxisome, plasma membrane, vacuole 43.07 39.25
CDX83627 Canola cytosol, peroxisome, plasma membrane 42.64 39.16
CDX94064 Canola plasma membrane 35.06 39.13
CDX76391 Canola plasma membrane 42.42 39.04
CDY27434 Canola plasma membrane 42.42 39.04
CDY21076 Canola cytosol, peroxisome, plasma membrane 43.72 38.92
CDX79109 Canola plasma membrane 41.77 38.83
CDY34598 Canola cytosol, peroxisome, vacuole 43.29 38.54
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 45.24 38.49
CDX94063 Canola plasma membrane 42.21 38.46
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 45.02 38.31
CDY49481 Canola plasma membrane 36.15 38.22
CDX83628 Canola plasma membrane 32.47 38.17
CDY16041 Canola cytosol, peroxisome, vacuole 42.86 38.15
CDX98712 Canola plasma membrane 41.77 38.07
CDY26602 Canola cytosol, peroxisome, vacuole 42.64 37.96
CDY27431 Canola plasma membrane 41.56 37.87
CDY24250 Canola cytosol, peroxisome, plasma membrane 25.76 37.54
CDY69153 Canola cytosol, peroxisome, plasma membrane 25.76 37.54
CDX98713 Canola plasma membrane 36.15 36.7
CDX76392 Canola plasma membrane 36.36 36.44
CDY64820 Canola plasma membrane 40.91 36.21
CDX69836 Canola plasma membrane 80.3 36.16
CDX98344 Canola plasma membrane 38.53 35.11
CDX67772 Canola plasma membrane 38.31 34.91
CDY33130 Canola cytosol, peroxisome, vacuole 23.16 34.74
CDY16896 Canola plasma membrane 37.23 34.68
CDY50190 Canola nucleus, peroxisome, plasma membrane 45.02 34.49
CDX92726 Canola nucleus, peroxisome, plasma membrane 44.59 34.45
CDY19295 Canola cytosol, peroxisome, plasma membrane 21.64 32.89
CDX84047 Canola plasma membrane 46.97 30.82
Protein Annotations
EnsemblPlants:CDX78379EnsemblPlantsGene:GSBRNA2T00129752001GO:A0A078CQM2GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF80PFAM:PF01554ProteinID:CDX78379
ProteinID:CDX78379.1TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EDF30AMapMan:24.2.4.1.1:
Description
BnaA03g02910D
Coordinates
chrLK031815:-:511437..514245
Molecular Weight (calculated)
50731.0 Da
IEP (calculated)
6.503
GRAVY (calculated)
0.753
Length
462 amino acids
Sequence
(BLAST)
001: MGERDDEAEG VGMAMIPLLR DQHEVEKDGD IMVETRKLWR IVGPAIFTRI TTYLILVITQ AFAGHLGELE LAAISIISNV IVGFNFGLLL GMASALETLC
101: GQAFGAKKYD MLGVYLQRSW IPDDIAELSG TVALWVIPVH FSFAFFFPLN RFLQCQLKNM VIAISAGVAL VVHIFVCWLF VYGLKLGVIG TMATVNVSWW
201: LNVFILFTYA TCGGCPLTWT GFSIEAFTGL WEFAKLSASS GIMLCLESWY YKILILMTGN LKDAKIAVDS LSICMAINGL EMMIPLAFLA ATGVRVANEL
301: GAGNGRRARF AVIISVTESF IIGLIFSVLV VFLHDQIGWI FSSSETVIKA VTDLSVLLAF TILLNSVQPV LSGVAIGSGW QSFVAYINLG CYYFIGLPLG
401: FVMGWIFKSG VKGIWAGMIF GGTAMQTLIL IFIVMRCDWE KEAQKASVRV NKWSISNSEG RH
Best Arabidopsis Sequence Match ( AT1G33100.1 )
(BLAST)
001: MAGRGGELTE ALVKKTGREE EDELGMKEKV WIESKKLWVV AAPAIFTRYS TFGVSMVTQA FIGHLGPTEL AAYSITFTIL LRFSNGILLG MAGALGTLCG
101: QAYGAKQYQM LGIYLQRSWI VLTGGTICLM PVFIFAGPIL LALGQEERIV RVARVLALWV IGINFSFVPS FTCQMFLQAQ SKNKIISYVT AVSLGLHVFF
201: SWLLVAHFNF GITGAMTSML IAFWLPIIVQ LLYVTCGGCK DTWRGFSMLA FKDLWPVLKL SLSSGGMLCL ELWYNSVLVL LTGNLKNAEV ALDALAICIS
301: INALEMMIAL GFLAAVSVRV SNELGSGNPK GAKFATLIAV FTSLSIGIVL FFVFLFLRGR ISYIFTTSEA VAAEVADLSP LLAFSILLNS VQPVLSGVAI
401: GAGWQGYVAY VNLACYYLVG IPIGVILGYV VGLQVKGVWI GMLFGIFVQT CVLTVMTLRT DWDQQVSTSL RNINRWVVPE SRDANQISSE E
Arabidopsis Description
DTX20Protein DETOXIFICATION 20 [Source:UniProtKB/Swiss-Prot;Acc:F4HPH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.