Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, nucleus, vacuole
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX97739
CDY30157

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 CDX97739 AT3G16310.1 21798944
AT3G21690.1 CDY30157 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001840.1-P Field mustard plasma membrane 89.31 98.69
CDY24250 Canola cytosol, peroxisome, plasma membrane 61.19 97.48
CDY33131 Canola golgi, plasma membrane, vacuole 33.27 95.45
CDY69153 Canola cytosol, peroxisome, plasma membrane 59.21 94.32
CDY33129 Canola cytosol, peroxisome, plasma membrane 91.88 91.88
CDY38631 Canola cytosol, peroxisome, vacuole 91.88 90.62
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 90.5 90.32
CDY39494 Canola cytosol, peroxisome, plasma membrane 91.88 90.27
CDY33130 Canola cytosol, peroxisome, vacuole 55.05 90.26
CDY19294 Canola cytosol, peroxisome, plasma membrane 91.68 90.08
CDY65669 Canola cytosol, peroxisome, plasma membrane 86.53 88.28
CDY39493 Canola cytosol, peroxisome, plasma membrane 86.93 87.28
CDY19295 Canola cytosol, peroxisome, plasma membrane 52.28 86.84
GSMUA_Achr6P00360_001 Banana vacuole 62.97 78.13
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 74.85 75.15
KRH26788 Soybean plasma membrane 74.65 74.8
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 71.49 74.59
Solyc12g005850.1.1 Tomato plasma membrane 74.26 73.24
KRH56125 Soybean plasma membrane 74.65 72.92
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 73.86 71.59
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 69.7 71.54
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 69.7 71.54
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 71.68 71.4
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 71.49 71.2
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 69.7 70.83
EER91319 Sorghum cytosol, peroxisome, plasma membrane 70.3 70.58
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 71.68 70.57
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 71.09 70.53
Os03t0572900-01 Rice plasma membrane 69.7 70.4
Os03t0571900-01 Rice plasma membrane 72.48 70.38
KXG38133 Sorghum cytosol, peroxisome, vacuole 71.88 70.35
KRH25385 Soybean plasma membrane 61.39 70.29
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 70.89 69.92
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 67.92 69.57
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 69.9 69.49
TraesCS3D01G506100.1 Wheat plasma membrane 68.51 69.48
TraesCS3A01G499200.1 Wheat plasma membrane 68.32 69.28
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 68.32 69.28
Zm00001d033063_P001 Maize vacuole 68.51 69.2
VIT_12s0059g02160.t01 Wine grape plasma membrane 70.5 69.13
GSMUA_Achr9P11610_001 Banana plasma membrane 67.72 69.09
TraesCS3B01G562400.2 Wheat plasma membrane 68.12 69.08
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 67.92 69.01
Zm00001d013809_P002 Maize plasma membrane 67.92 69.01
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 67.72 68.95
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 67.92 68.74
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 67.92 68.74
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 67.72 68.54
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 67.13 68.21
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 71.29 68.18
KXG37120 Sorghum plasma membrane 68.12 68.12
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 67.13 67.94
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 67.33 67.86
EER91321 Sorghum plasma membrane 66.93 67.47
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 66.73 67.4
PGSC0003DMT400022543 Potato plasma membrane 69.31 66.79
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 67.72 66.67
GSMUA_Achr4P23760_001 Banana plasma membrane 60.59 66.52
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 67.52 66.47
Zm00001d021629_P003 Maize plasma membrane 67.52 66.47
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 67.72 66.28
TraesCSU01G124400.1 Wheat plasma membrane, plastid 65.54 66.2
TraesCS4B01G388800.1 Wheat plasma membrane 65.35 66.13
TraesCS5A01G553200.1 Wheat plasma membrane 65.15 65.93
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 66.73 65.82
CDY07257 Canola endoplasmic reticulum, vacuole 41.98 64.83
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 64.75 64.62
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 47.33 64.59
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 65.74 64.59
TraesCS2B01G247700.2 Wheat plasma membrane 62.57 64.1
TraesCS2A01G222300.1 Wheat plasma membrane 62.18 63.69
TraesCS2D01G228200.1 Wheat plasma membrane 62.18 63.69
EER93896 Sorghum cytosol, peroxisome, plasma membrane 65.94 63.55
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 61.98 63.1
TraesCS3B01G485100.1 Wheat plasma membrane 68.71 62.98
CDY64933 Canola plasma membrane 62.77 62.77
HORVU2Hr1G046420.16 Barley plasma membrane 60.79 62.15
CDY12916 Canola cytosol, plasma membrane, vacuole 61.39 61.88
CDY19507 Canola cytosol, plasma membrane, vacuole 61.19 61.68
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 59.8 61.26
CDY34833 Canola plasma membrane 55.45 61.0
CDY25329 Canola plasma membrane 60.4 60.88
CDY34637 Canola plasma membrane 55.25 60.78
CDY47166 Canola plasma membrane 60.2 60.68
Zm00001d006493_P001 Maize plasma membrane 67.52 59.82
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 60.2 59.61
CDX79109 Canola plasma membrane 58.22 59.15
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 66.53 58.95
CDX76391 Canola plasma membrane 58.22 58.57
CDY27434 Canola plasma membrane 58.22 58.57
CDY27431 Canola plasma membrane 58.22 57.99
CDX94063 Canola plasma membrane 58.02 57.79
CDX94061 Canola peroxisome, plasma membrane, vacuole 57.82 57.59
CDX98712 Canola plasma membrane 57.82 57.59
CDX98711 Canola peroxisome, plasma membrane, vacuole 57.43 57.2
CDX76392 Canola plasma membrane 52.08 57.05
CDY64820 Canola plasma membrane 58.42 56.51
CDX94064 Canola plasma membrane 46.14 56.28
Zm00001d006494_P004 Maize plasma membrane 62.18 55.38
CDX98713 Canola plasma membrane 49.7 55.16
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 68.12 50.0
CDY06731 Canola cytosol, peroxisome, plasma membrane 45.54 47.52
CDY17070 Canola cytosol, peroxisome, plasma membrane 45.35 47.31
CDX69834 Canola plasma membrane 44.36 47.06
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 17.03 46.74
CDX67772 Canola plasma membrane 46.53 46.35
CDX83628 Canola plasma membrane 36.04 46.31
CDY01224 Canola plasma membrane 30.89 46.29
CDX98344 Canola plasma membrane 46.14 45.96
CDX78379 Canola peroxisome, plasma membrane, vacuole 41.58 45.45
CDX81281 Canola plasma membrane 43.37 45.25
CDX81176 Canola plasma membrane 43.56 45.08
CDY33962 Canola plasma membrane 28.51 45.0
CDY26602 Canola cytosol, peroxisome, vacuole 45.94 44.7
CDX83627 Canola cytosol, peroxisome, plasma membrane 44.36 44.53
CDY16041 Canola cytosol, peroxisome, vacuole 45.74 44.51
CDY21076 Canola cytosol, peroxisome, plasma membrane 45.74 44.51
CDY34598 Canola cytosol, peroxisome, vacuole 45.74 44.51
CDY40095 Canola plasma membrane 42.77 44.35
CDY13643 Canola cytosol, peroxisome, plasma membrane 44.16 44.33
CDY44967 Canola plasma membrane 35.05 44.03
CDX97005 Canola plasma membrane 42.18 43.74
CDY08798 Canola cytosol, peroxisome, plasma membrane 27.72 43.61
CDX69835 Canola plasma membrane 41.98 43.53
CDY14558 Canola plasma membrane 27.72 43.48
CDX97001 Canola plasma membrane 42.18 43.38
CDX85764 Canola plasma membrane 42.57 43.0
CDX93794 Canola plasma membrane 41.78 42.8
CDY70471 Canola cytosol, peroxisome, plasma membrane 25.54 42.57
CDY40093 Canola plasma membrane 42.18 42.43
CDX78378 Canola plasma membrane 40.4 42.06
CDX89406 Canola plasma membrane 42.38 41.8
CDX81172 Canola plasma membrane 40.0 41.65
CDX94432 Canola plasma membrane 41.98 41.49
CDX81174 Canola plasma membrane 33.27 41.38
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 44.16 41.07
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 44.16 41.07
CDY08796 Canola plasma membrane 43.37 40.41
CDY61495 Canola plasma membrane 43.37 40.18
CDY54720 Canola plasma membrane 43.37 38.97
CDY08797 Canola plasma membrane 43.17 38.58
CDY49481 Canola plasma membrane 33.07 38.22
CDY21177 Canola plasma membrane 36.83 37.35
CDY50654 Canola plasma membrane 36.83 37.27
CDY51758 Canola plasma membrane 36.83 37.27
CDY29945 Canola plasma membrane 36.63 37.15
CDY38453 Canola plasma membrane 29.11 36.93
CDY50190 Canola nucleus, peroxisome, plasma membrane 41.98 35.16
CDX92726 Canola nucleus, peroxisome, plasma membrane 41.58 35.12
CDY16896 Canola plasma membrane 32.28 32.86
CDX84047 Canola plasma membrane 39.21 28.12
CDX69836 Canola plasma membrane 41.19 20.27
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078DUD8EnsemblPlants:CDX92916ProteinID:CDX92916ProteinID:CDX92916.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00154769001InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF200TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EE2BE0SEG:seg
Description
BnaA03g36380D
Coordinates
chrLK031874:+:2199..6764
Molecular Weight (calculated)
55098.3 Da
IEP (calculated)
5.031
GRAVY (calculated)
0.778
Length
505 amino acids
Sequence
(BLAST)
001: MDSSQYDVVY QPLLQPQLSP LPESSNGELE RVLSDLETPL FLRLRKATMI ESKLLFKLAA PAVIVYMINY LMSMSTQIFS GHLGNLELAA ASLGNTGIQV
101: FAYGLMLGMG SAVETLCGQA FGGRKYDMLG VYLQRSAVLL TLTGVLLTII YVFSKPILLF LGESPEIASA ASLFVYGLIP QIFAYAMNFP IQKFLQAQSI
201: VAPSAYIATG TLFVHLLLSW LAVYKLGWGL LGASLVLSLS WWIIVVAQFV YIVTSERCRE TWRGFSVQAF SGLPSFFKLS AASAVMLCLE TWYFQILVLL
301: AGLLEDPELA LDSLSICMTI SGWVFMISVG FNAAISVRVS NELGAGNPKS AAFSVIIVNI YSFITCVILA IVILACRDVL SYAFTEGEKV SAAVSELCPL
401: LALTLILNGI QPVLSGVAVG CGWQTFVAKV NVGCYYIVGI PLGALFGYSF YPVILGIWTG MICGTLIQTV ILAWVTFRTD WTKEVEEASK RLDKWSNIKL
501: EVVPE
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.