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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • vacuole 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plastid, secretory
BaCelLo:plastid
EpiLoc:vacuole
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Solyc03g120880.2.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 Solyc03g120880.2.1 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400022543 Potato plasma membrane 91.6 89.5
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 79.88 81.31
GSMUA_Achr6P00360_001 Banana vacuole 62.89 79.12
KRH26788 Soybean plasma membrane 75.59 76.79
Bra001840.1-P Field mustard plasma membrane 68.16 76.37
CDY24250 Canola cytosol, peroxisome, plasma membrane 47.27 76.34
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 75.39 76.13
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 75.2 75.94
CDY69153 Canola cytosol, peroxisome, plasma membrane 46.68 75.39
KRH56125 Soybean plasma membrane 75.59 74.85
CDX92916 Canola cytosol, plasma membrane, vacuole 73.24 74.26
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 71.88 73.75
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 72.66 73.66
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 72.66 73.52
CDY33130 Canola cytosol, peroxisome, vacuole 44.14 73.38
CDY33129 Canola cytosol, peroxisome, plasma membrane 72.27 73.27
CDY38631 Canola cytosol, peroxisome, vacuole 73.05 73.05
VIT_12s0059g02160.t01 Wine grape plasma membrane 73.44 73.01
Os03t0572900-01 Rice plasma membrane 71.09 72.8
CDY39494 Canola cytosol, peroxisome, plasma membrane 73.05 72.76
CDY65669 Canola cytosol, peroxisome, plasma membrane 70.31 72.73
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 69.14 72.69
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 73.44 72.17
EER91319 Sorghum cytosol, peroxisome, plasma membrane 70.9 72.17
CDY19294 Canola cytosol, peroxisome, plasma membrane 72.27 71.98
CDY39493 Canola cytosol, peroxisome, plasma membrane 70.51 71.77
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 68.95 71.75
CDY33131 Canola golgi, plasma membrane, vacuole 24.61 71.59
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 68.55 71.34
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 69.14 71.23
Zm00001d013809_P002 Maize plasma membrane 69.14 71.23
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 69.53 71.2
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 68.36 70.99
GSMUA_Achr9P11610_001 Banana plasma membrane 68.55 70.91
Zm00001d033063_P001 Maize vacuole 69.14 70.8
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 68.95 70.74
CDY19295 Canola cytosol, peroxisome, plasma membrane 41.8 70.39
KRH25385 Soybean plasma membrane 60.35 70.07
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 67.77 69.96
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 68.16 69.94
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 67.77 69.82
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 67.77 69.82
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 67.97 69.74
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 67.77 69.68
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 67.77 69.54
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 67.77 69.26
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 68.75 69.16
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 67.38 69.14
TraesCS3D01G506100.1 Wheat plasma membrane 66.99 68.88
TraesCS3A01G499200.1 Wheat plasma membrane 66.8 68.67
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 68.55 68.55
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 67.97 68.5
TraesCS3B01G562400.2 Wheat plasma membrane 66.6 68.47
KXG37120 Sorghum plasma membrane 67.19 68.12
Os03t0571900-01 Rice plasma membrane 69.14 68.08
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 68.16 68.03
Zm00001d021629_P003 Maize plasma membrane 67.97 67.84
TraesCS4B01G388800.1 Wheat plasma membrane 66.02 67.74
Solyc02g032660.2.1 Tomato cytosol, peroxisome, vacuole 66.6 67.66
GSMUA_Achr4P23760_001 Banana plasma membrane 60.74 67.61
TraesCS5A01G553200.1 Wheat plasma membrane 65.82 67.54
KXG38133 Sorghum cytosol, peroxisome, vacuole 67.97 67.44
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 65.82 67.4
TraesCSU01G124400.1 Wheat plasma membrane, plastid 65.82 67.4
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 66.99 66.47
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 68.36 66.29
EER91321 Sorghum plasma membrane 64.84 66.27
Solyc02g080490.2.1 Tomato cytosol, peroxisome, plasma membrane 64.26 65.28
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 46.88 64.86
EER93896 Sorghum cytosol, peroxisome, plasma membrane 66.21 64.69
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 63.87 64.62
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 64.45 64.45
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 64.26 64.13
TraesCS2B01G247700.2 Wheat plasma membrane 61.72 64.1
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 64.26 64.01
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 64.06 63.94
TraesCS2D01G228200.1 Wheat plasma membrane 61.52 63.89
TraesCS2A01G222300.1 Wheat plasma membrane 61.33 63.69
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 60.94 62.9
TraesCS3B01G485100.1 Wheat plasma membrane 66.8 62.07
HORVU2Hr1G046420.16 Barley plasma membrane 59.77 61.94
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 58.98 61.26
Zm00001d006493_P001 Maize plasma membrane 67.77 60.88
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 58.59 58.82
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 64.26 57.72
Zm00001d006494_P004 Maize plasma membrane 60.35 54.5
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 71.88 53.49
Solyc03g063730.2.1 Tomato plasma membrane 39.26 48.67
Solyc05g013450.2.1 Tomato cytosol, peroxisome, plasma membrane 47.85 47.57
Solyc05g013470.2.1 Tomato plasma membrane 46.68 47.42
Solyc07g008410.2.1 Tomato plasma membrane 43.75 46.67
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 43.55 46.27
Solyc05g013460.2.1 Tomato cytosol, peroxisome, plasma membrane 46.29 46.11
Solyc12g006360.1.1 Tomato plasma membrane 44.92 45.73
Solyc12g019320.1.1 Tomato plasma membrane 44.14 45.02
Solyc03g025240.1.1 Tomato plasma membrane 34.57 44.36
Solyc10g080340.1.1 Tomato plasma membrane 43.16 43.59
Solyc03g025200.2.1 Tomato plasma membrane 40.43 43.58
Solyc10g051130.1.1 Tomato plasma membrane 40.62 43.51
Solyc01g109320.2.1 Tomato peroxisome 42.19 43.46
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 41.8 43.41
Solyc04g074840.2.1 Tomato plasma membrane 42.38 43.14
Solyc01g109310.2.1 Tomato plasma membrane 39.26 42.23
Solyc03g025190.2.1 Tomato plasma membrane 41.41 41.9
Solyc10g081260.1.1 Tomato plasma membrane 38.87 41.03
Solyc03g025250.2.1 Tomato plasma membrane 40.04 40.92
Solyc06g036130.2.1 Tomato plasma membrane 40.23 40.87
Solyc03g025220.2.1 Tomato plasma membrane 39.84 40.4
Solyc08g005880.2.1 Tomato plasma membrane 41.99 40.26
Solyc03g025230.2.1 Tomato plasma membrane 39.06 40.0
Solyc04g074860.2.1 Tomato plasma membrane 36.13 32.51
Protein Annotations
MapMan:24.2.4.1.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085UniProt:K4DBC3InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF188
EnsemblPlantsGene:Solyc12g005850.1EnsemblPlants:Solyc12g005850.1.1TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000276A4A6SEG:seg
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:K4DBC3]
Coordinates
chr12:-:481937..488981
Molecular Weight (calculated)
55927.3 Da
IEP (calculated)
6.144
GRAVY (calculated)
0.755
Length
512 amino acids
Sequence
(BLAST)
001: MASPENDIYR PFLQNNVTSL SPQLSETHNF ESSNELETVL LDTEITLWSK LRLATWIEMK LLFFLAAPAV MVYMINYIMS MSTQIFSGHL GNLELAAASL
101: GNTGIQVFAY GLMLGMGSAV ETLCGQAFGA KKYDMLGVYL QRSTVLLTLT GILLTIVYIF CKPILIFVGQ TERIAAAAAL FVYGLIPQIF AYAINFPIQK
201: FLQAQSIVAP SAYISAATLV LHLGLSWVVI FKIGLGLLGA SLVLSLSWWI IVIGQFVYIV KSEKCKQTWK GFSWMAFTGL PEFFKLSAAS AVMLCLETWY
301: FQIVVLLAGL LENPEVALDA LSICMSISGW VFMISVGFNA AASVRVSNEL GARHPKSAAF SVVVVTSWSF ILSVIAAVIV LALRNLISYA FTEGEVVAEA
401: VSDLCPLLAL SLILNGIQPV LSGVAVGCGW QTFVAYVNIG CYYIVGVPLG ALLGFYFKLG AKGIWSGMLG GTVMQTIILI WITARTDWNK EVEAAQSRLK
501: KWDDKKESIL EE
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.