Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- vacuole 2
- plasma membrane 5
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G21690.1 | EES02290 | AT3G16310.1 | 21798944 |
| AT3G21690.1 | EES19830 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d021629_P003 | Maize | plasma membrane | 82.97 | 81.68 |
| TraesCSU01G124400.1 | Wheat | plasma membrane, plastid | 74.85 | 75.6 |
| TraesCS4B01G388800.1 | Wheat | plasma membrane | 74.46 | 75.35 |
| HORVU1Hr1G007910.1 | Barley | peroxisome, plasma membrane | 76.63 | 75.29 |
| TraesCS5A01G553200.1 | Wheat | plasma membrane | 74.26 | 75.15 |
| Zm00001d006493_P001 | Maize | plasma membrane | 81.98 | 72.63 |
| CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 45.35 | 72.24 |
| CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 45.35 | 72.24 |
| Bra001840.1-P | Field mustard | plasma membrane | 64.36 | 71.12 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 71.09 | 70.95 |
| KXG38133 | Sorghum | cytosol, peroxisome, vacuole | 72.08 | 70.54 |
| EER91319 | Sorghum | cytosol, peroxisome, plasma membrane | 69.7 | 69.98 |
| CDY33130 | Canola | cytosol, peroxisome, vacuole | 42.57 | 69.81 |
| Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 69.5 | 69.5 |
| EER91321 | Sorghum | plasma membrane | 68.91 | 69.46 |
| CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 69.31 | 69.31 |
| KRH26788 | Soybean | plasma membrane | 69.11 | 69.25 |
| Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 68.32 | 69.14 |
| VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 69.11 | 68.84 |
| Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 68.12 | 68.8 |
| VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 68.91 | 68.64 |
| Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 67.92 | 68.19 |
| CDX92916 | Canola | cytosol, plasma membrane, vacuole | 68.12 | 68.12 |
| CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 66.73 | 68.08 |
| CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 67.72 | 67.99 |
| CDY38631 | Canola | cytosol, peroxisome, vacuole | 68.91 | 67.97 |
| EER93896 | Sorghum | cytosol, peroxisome, plasma membrane | 70.3 | 67.75 |
| Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.15 | 67.56 |
| CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 68.71 | 67.51 |
| CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 68.71 | 67.51 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 64.55 | 67.36 |
| KRH56125 | Soybean | plasma membrane | 68.91 | 67.31 |
| Solyc12g005850.1.1 | Tomato | plasma membrane | 68.12 | 67.19 |
| CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 40.4 | 67.11 |
| CDY33131 | Canola | golgi, plasma membrane, vacuole | 22.97 | 65.91 |
| VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 66.73 | 65.44 |
| KRH25385 | Soybean | plasma membrane | 56.44 | 64.63 |
| EER97294 | Sorghum | endoplasmic reticulum, peroxisome, plasma membrane | 63.37 | 64.52 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 64.75 | 62.4 |
| VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 65.35 | 47.97 |
| OQU87609 | Sorghum | plasma membrane | 38.81 | 47.92 |
| OQU85978 | Sorghum | plasma membrane | 36.63 | 44.58 |
| OQU79625 | Sorghum | golgi, plasma membrane, vacuole | 44.36 | 43.84 |
| OQU85979 | Sorghum | cytosol, peroxisome, vacuole | 43.96 | 43.79 |
| EER96893 | Sorghum | cytosol, peroxisome, vacuole | 40.99 | 43.4 |
| OQU86679 | Sorghum | cytosol, peroxisome, plasma membrane | 43.17 | 43.17 |
| KXG25339 | Sorghum | cytosol, peroxisome, plasma membrane | 41.78 | 42.63 |
| EES15223 | Sorghum | plasma membrane | 42.77 | 42.52 |
| EER91211 | Sorghum | plasma membrane | 41.39 | 42.39 |
| OQU80740 | Sorghum | cytosol, peroxisome, plasma membrane | 42.97 | 42.38 |
| EER96891 | Sorghum | cytosol, peroxisome, plasma membrane | 40.59 | 42.18 |
| KXG35815 | Sorghum | plasma membrane | 40.2 | 42.12 |
| EES15585 | Sorghum | cytosol, peroxisome, plasma membrane | 43.17 | 41.52 |
| OQU80697 | Sorghum | cytosol | 42.77 | 40.6 |
| OQU93093 | Sorghum | cytosol, peroxisome, plasma membrane | 41.98 | 40.38 |
| EES09180 | Sorghum | cytosol, peroxisome, plasma membrane | 42.18 | 40.26 |
| OQU92001 | Sorghum | peroxisome | 37.82 | 36.17 |
| KXG38740 | Sorghum | plasma membrane | 35.05 | 34.77 |
Protein Annotations
| MapMan:24.2.4.1.1 | UniProt:A0A1B6QGW3 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlants:KXG37120 | ProteinID:KXG37120 | ProteinID:KXG37120.1 | InterPro:MATE_fam | PFAM:PF01554 |
| PANTHER:PTHR11206 | PANTHER:PTHR11206:SF200 | EnsemblPlantsGene:SORBI_3001G012600 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI0002206FEB |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:1174280..1175932
Molecular Weight (calculated)
53747.5 Da
IEP (calculated)
6.406
GRAVY (calculated)
0.819
Length
505 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSTTPLLQP APHGGGGSRE LEAILEDASV PWARRALRGA GVELPLLLRI ALPAVAVYMI NYLMSMSTQI FCGQLGNLEL AAVSLGNTGI QVFAYGLMLG
101: MGSAVETLCG QAYGAHKPGM LGVYLQRSTV LLTATGVPLA VAYGFSERIL VFLGESERIA HAAAVFVYGL IPQIFAYAAN FPIQKFLQAQ SIVAPSAYIS
201: TATLALHLAL TWLAVDRLGM GLLGGALVLS LSWWIIVLAQ FGYIVTSPRC RETWTGFTSQ AFHSLGSFFK LSAASAVMLC LETWYFQILV LIAGLLKNPE
301: LSLDSLSICM TINGWVFMIS VGFNAAASVR VGNELGAGNP RAAAFSVVVV TSLSLAVAVV CAVVVLCIRD QLSYFFTGGE AVARAVSDLC PLLAVTLVLN
401: GVQPVLSGVA VGCGWQAFVA YVNVGCYYII GVPLGVFLGF YLDLGAKGIW SGMVIGGTMM QTLILLWVTS RTDWNKEVID VLHPCHALLL MLVIHSMHAV
501: FSDDD
101: MGSAVETLCG QAYGAHKPGM LGVYLQRSTV LLTATGVPLA VAYGFSERIL VFLGESERIA HAAAVFVYGL IPQIFAYAAN FPIQKFLQAQ SIVAPSAYIS
201: TATLALHLAL TWLAVDRLGM GLLGGALVLS LSWWIIVLAQ FGYIVTSPRC RETWTGFTSQ AFHSLGSFFK LSAASAVMLC LETWYFQILV LIAGLLKNPE
301: LSLDSLSICM TINGWVFMIS VGFNAAASVR VGNELGAGNP RAAAFSVVVV TSLSLAVAVV CAVVVLCIRD QLSYFFTGGE AVARAVSDLC PLLAVTLVLN
401: GVQPVLSGVA VGCGWQAFVA YVNVGCYYII GVPLGVFLGF YLDLGAKGIW SGMVIGGTMM QTLILLWVTS RTDWNKEVID VLHPCHALLL MLVIHSMHAV
501: FSDDD
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.