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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, nucleus, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU92001 Sorghum peroxisome 74.07 71.4
Os10t0195000-01 Rice golgi, mitochondrion, plasma membrane, vacuole 56.97 62.5
HORVU3Hr1G014320.2 Barley plasma membrane 58.74 61.27
TraesCS3B01G039300.1 Wheat plasma membrane 59.14 60.56
TraesCS3D01G036400.1 Wheat plasma membrane 59.53 60.48
TraesCS3A01G044500.1 Wheat plasma membrane 59.33 60.28
EER91211 Sorghum plasma membrane 50.49 52.13
OQU87609 Sorghum plasma membrane 41.06 51.1
GSMUA_Achr9P26370_001 Banana plasma membrane 44.6 48.71
GSMUA_Achr5P01870_001 Banana plasma membrane 43.81 47.25
PGSC0003DMT400021339 Potato peroxisome, plasma membrane, vacuole 42.04 44.77
Solyc10g051130.1.1 Tomato plasma membrane 41.85 44.56
Solyc01g109320.2.1 Tomato peroxisome 43.03 44.06
VIT_18s0001g11760.t01 Wine grape plasma membrane 40.86 43.42
Solyc01g109310.2.1 Tomato plasma membrane 40.08 42.86
PGSC0003DMT400064838 Potato plasma membrane 39.49 42.23
KRH05771 Soybean cytosol, plasma membrane, vacuole 39.49 41.61
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 39.29 41.32
AT1G47530.1 Thale cress cytosol, peroxisome, plasma membrane 39.29 41.32
CDY06731 Canola cytosol, peroxisome, plasma membrane 39.29 41.32
CDY17070 Canola cytosol, peroxisome, plasma membrane 39.1 41.12
KRH15267 Soybean cytosol, plasma membrane, vacuole 38.9 40.99
OQU85978 Sorghum plasma membrane 32.42 39.76
EES15223 Sorghum plasma membrane 39.49 39.57
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 39.29 39.06
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 37.33 38.38
EER91319 Sorghum cytosol, peroxisome, plasma membrane 37.13 37.57
EER91321 Sorghum plasma membrane 36.74 37.33
OQU85979 Sorghum cytosol, peroxisome, vacuole 36.94 37.08
EER96893 Sorghum cytosol, peroxisome, vacuole 33.79 36.06
KXG38133 Sorghum cytosol, peroxisome, vacuole 36.54 36.05
KXG35815 Sorghum plasma membrane 33.99 35.89
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 35.17 35.45
OQU80697 Sorghum cytosol 36.74 35.15
KXG37120 Sorghum plasma membrane 34.77 35.05
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 33.6 34.48
EER96891 Sorghum cytosol, peroxisome, plasma membrane 32.81 34.36
EER93896 Sorghum cytosol, peroxisome, plasma membrane 35.36 34.35
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 34.38 33.33
EES15585 Sorghum cytosol, peroxisome, plasma membrane 33.79 32.76
EES09180 Sorghum cytosol, peroxisome, plasma membrane 33.01 31.76
OQU79625 Sorghum golgi, plasma membrane, vacuole 31.63 31.51
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1B6QLD9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlants:KXG38740ProteinID:KXG38740ProteinID:KXG38740.1InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF174EnsemblPlantsGene:SORBI_3001G273000TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI00081ADDF1
Description
hypothetical protein
Coordinates
chr1:-:52764756..52771913
Molecular Weight (calculated)
55555.2 Da
IEP (calculated)
8.148
GRAVY (calculated)
0.629
Length
509 amino acids
Sequence
(BLAST)
001: MHLRYKDKAQ TPWKKMNKFE IPFCVVWSLV DGALVLHCTE VFQFSIGFVT TAFVGHLGDV ELAAVTVAEN ILDTSAYGLL FGMGSALNTL IGQAVGAGQL
101: DRLGTYTQQS LIICGTTALA LAPVYIFATP ILQFFLHQPV DVSRAAGQYA RWAIPRLFAN AMDIPLLMFF RGQSRVWTLA AISGVALAVH TVLTYIAVRQ
201: LGYGLPGAAV AGDISQWLIV AAQFAYMIGG RFPDTWKGFT MCAFNNIGAF VKLSLGSAVM ICLEFWYNTT LLILVGLLKH AKFQLDIMSV CLNYEFMAIL
301: VAMGFSTAIG IRVSNELGAK RPMETRFAVL VAVSTSIFMG SIFMGVVLIW RTSLPKLFSD SEEVIHGASK LGLLLALTVW MISICPVLSG VAVGAGWQVS
401: VAFINIGCFY LVGIPMGILF GIKLKHGTMG IWMGMLTGTF LQMAILLAVI FTTNWDKQAA LTEERMAEWG GKEKLPLMKS PHTDDQMTPA LEKMLAQDSK
501: KNVDLLCTE
Best Arabidopsis Sequence Match ( AT1G12950.1 )
(BLAST)
001: MEKDNDFKDP FLASTEEEEL DPATQKALME YLGVGSRASS LVSFSSTAVD IPPISGVGDF VREFRIESRK LWKLAGPAIF TTMSQYSLGA VTQVFAGHIS
101: TLALAAVSIE NSVIAGFSFG IMLGMGSALE TLCGQAFGAG KVSMLGVYLQ RSWVILSVTA LFLSLIYIFA APILTFIGQT AAISAMAGIF SIYMIPQIFA
201: YAINFPTAKF LQSQSKIMVM AGISGVVLVI HSFFTWLVMS RLHWGLPGLA LVLNTSWWVI VVAQLVYIFN CTCGEAWSGF TWEAFHNLWG FVKLSLASAA
301: MLCLEIWYFM ALVLFAGYLK NAEVSVAALS ICMNILGWAA MVAFGTNAAV SVRVSNELGA SHPRTAKFSL VVAVILSTAI GMFIAAGLLF FRNEYPVLFV
401: EDEEVRNVVR ELTPMLAFCI VINNVQPVLS GVAVGAGWQA VVAYVNIACY YLFGVPFGLL LGFKLEYGVM GIWWGMVTGT FVQSIVLTWM ICKTNWEKEA
501: SMAEERIKEW GGVPAEKETL LN
Arabidopsis Description
DTX31Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WCP4]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.