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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG35815 Sorghum plasma membrane 72.84 73.44
EER96893 Sorghum cytosol, peroxisome, vacuole 69.96 71.28
TraesCS5B01G245500.1 Wheat plasma membrane 69.96 71.28
TraesCS5A01G247900.1 Wheat golgi, peroxisome, plasma membrane 69.55 71.01
TraesCS5D01G254500.1 Wheat mitochondrion, plasma membrane 44.86 70.55
Os09t0468000-01 Rice plasma membrane 66.46 67.01
TraesCS5D01G254400.1 Wheat plasma membrane 64.2 66.24
TraesCS5B01G245400.1 Wheat plasma membrane 63.58 65.61
HORVU5Hr1G069900.5 Barley golgi 68.93 65.43
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 23.87 63.04
Bra024381.1-P Field mustard plasma membrane 56.79 57.02
CDX81281 Canola plasma membrane 55.76 55.99
Bra037814.1-P Field mustard plasma membrane 55.56 55.9
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 54.53 55.09
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 53.5 54.97
AT5G65380.1 Thale cress cytosol, peroxisome, plasma membrane 54.94 54.94
KXG25339 Sorghum cytosol, peroxisome, plasma membrane 55.76 54.75
KRH74515 Soybean cytosol, peroxisome, plasma membrane 53.91 53.36
VIT_18s0001g06790.t01 Wine grape plasma membrane 53.5 53.06
CDX78379 Canola peroxisome, plasma membrane, vacuole 50.41 53.03
Solyc04g074850.2.1 Tomato cytosol, peroxisome, plasma membrane 52.47 52.9
OQU86679 Sorghum cytosol, peroxisome, plasma membrane 54.94 52.87
Bra006059.1-P Field mustard plasma membrane 52.67 52.57
CDX81176 Canola plasma membrane 52.67 52.46
OQU93093 Sorghum cytosol, peroxisome, plasma membrane 56.38 52.19
CDY33962 Canola plasma membrane 34.36 52.19
CDX81172 Canola plasma membrane 51.85 51.96
CDX69835 Canola plasma membrane 52.06 51.95
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 52.67 51.93
Solyc11g010380.1.1 Tomato cytosol, plasma membrane, vacuole 52.47 51.72
PGSC0003DMT400005437 Potato cytosol, peroxisome, plasma membrane 53.09 51.7
CDX78378 Canola plasma membrane 51.44 51.55
CDX97005 Canola plasma membrane 51.65 51.54
CDX97001 Canola plasma membrane 52.06 51.53
CDY40093 Canola plasma membrane 53.09 51.39
CDX69834 Canola plasma membrane 50.21 51.26
CDX85764 Canola plasma membrane 52.67 51.2
Bra009034.1-P Field mustard plasma membrane 45.06 51.05
CDY08796 Canola plasma membrane 56.79 50.92
KRH62283 Soybean cytosol, peroxisome, plasma membrane 52.67 50.89
VIT_18s0001g06820.t01 Wine grape plasma membrane 50.62 50.83
CDY40095 Canola plasma membrane 50.82 50.72
AT5G10420.1 Thale cress plasma membrane 51.03 50.72
CDY70471 Canola cytosol, peroxisome, plasma membrane 31.48 50.49
CDY61495 Canola plasma membrane 56.58 50.46
AT5G44050.1 Thale cress plasma membrane 50.21 49.69
Solyc04g074840.2.1 Tomato plasma membrane 51.23 49.5
CDY14558 Canola plasma membrane 32.72 49.38
CDY08798 Canola cytosol, peroxisome, plasma membrane 32.51 49.22
CDY54720 Canola plasma membrane 55.97 48.4
CDX81174 Canola plasma membrane 40.12 48.03
PGSC0003DMT400005432 Potato plasma membrane 46.3 47.47
Bra006058.1-P Field mustard plasma membrane 50.82 46.96
CDY08797 Canola plasma membrane 54.53 46.9
Bra028589.1-P Field mustard peroxisome 39.09 45.78
Bra024379.1-P Field mustard plasma membrane 53.5 45.77
KRH62279 Soybean cytosol, peroxisome, plasma membrane 48.35 44.85
EES15585 Sorghum cytosol, peroxisome, plasma membrane 47.74 44.19
EES09180 Sorghum cytosol, peroxisome, plasma membrane 47.33 43.48
EER91319 Sorghum cytosol, peroxisome, plasma membrane 43.62 42.15
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 42.8 41.94
OQU87609 Sorghum plasma membrane 34.98 41.56
OQU80740 Sorghum cytosol, peroxisome, plasma membrane 43.0 40.82
EES15223 Sorghum plasma membrane 42.59 40.75
EER91321 Sorghum plasma membrane 41.98 40.72
KXG37120 Sorghum plasma membrane 42.18 40.59
KXG38133 Sorghum cytosol, peroxisome, vacuole 43.0 40.5
OQU85978 Sorghum plasma membrane 34.57 40.48
OQU85979 Sorghum cytosol, peroxisome, vacuole 41.36 39.65
EER91211 Sorghum plasma membrane 39.92 39.35
OQU80697 Sorghum cytosol 42.39 38.72
EER93896 Sorghum cytosol, peroxisome, plasma membrane 41.36 38.36
Solyc04g074860.2.1 Tomato plasma membrane 43.83 37.43
OQU79625 Sorghum golgi, plasma membrane, vacuole 38.89 36.99
OQU92001 Sorghum peroxisome 36.01 33.14
KXG38740 Sorghum plasma membrane 34.36 32.81
CDX69836 Canola plasma membrane 51.65 24.46
Protein Annotations
MapMan:24.2.4.1.1EntrezGene:8063732UniProt:C5X308EnsemblPlants:EER96891ProteinID:EER96891ProteinID:EER96891.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF150EnsemblPlantsGene:SORBI_3002G232200TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0001A83695RefSeq:XP_002460370.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr2:+:62327572..62333089
Molecular Weight (calculated)
52273.5 Da
IEP (calculated)
7.801
GRAVY (calculated)
0.679
Length
486 amino acids
Sequence
(BLAST)
001: MESQSDVPLL PTLPRPPPEK RGGGKIQFQG RLGREVWEES KKLGAVVGPA VFMNLVFSSM NLVSQSFAGH LGDLDLAAFS IANTVVDGFN FAMLLGMASA
101: TETLCGQAYG AKQYHMLGIY LQRSWLVLLA FAVLLAPVYV FSGQLLAAFG QPAELARAAG SVSVYFLPSH FMYAIHLPVM TFLQCQRKNW VPTVATAAVF
201: AVHVAATWLL VNCLGLGVFG VAMAFNISWA VLAALLLSYA LGGGCPETWS GFSTSAFVDL KEFVMLSASS GVMVCLENWY YRILIFLTAY MKSAELAVDA
301: LSICMSLTGW EMMIHMGFLE GTGVRVANEL GAANAHGARF ATIVSTAMSF LISLFASLLA LIFHNKLAMI FSSSEAVIDA VDNISVLLAL TILLNGIQPV
401: LSGVAIGSGW QALVAYVNVG SYYFIGVPLG VLLGWRFNYG VPGIWAGMIS GTTMQTLILA VITLRCDWNK EALKAGNRVR QWSSTK
Best Arabidopsis Sequence Match ( AT1G47530.1 )
(BLAST)
001: MGKDKTLPLL DPREPPELTG TKSASKVWAK EFGEESKRLW ELAGPAIFTA ISQYSLGALT QTFSGRLGEL ELAAVSVENS VISGLAFGVM LGMGSALETL
101: CGQAYGAGQI RMMGIYMQRS WVILFTTALF LLPVYIWAPP ILSFFGEAPH ISKAAGKFAL WMIPQLFAYA ANFPIQKFLQ SQRKVLVMAW ISGVVLVIHA
201: VFSWLFILYF KWGLVGAAIT LNTSWWLIVI GQLLYILITK SDGAWTGFSM LAFRDLYGFV KLSLASALML CLEFWYLMVL VVVTGLLPNP LIPVDAISIC
301: MNIEGWTAMI SIGFNAAISV RVSNELGAGN AALAKFSVIV VSITSTLIGI VCMIVVLATK DSFPYLFTSS EAVAAETTRI AVLLGFTVLL NSLQPVLSGV
401: AVGAGWQALV AYVNIACYYI IGLPAGLVLG FTLDLGVQGI WGGMVAGICL QTLILIGIIY FTNWNKEAEQ AESRVQRWGG TAQE
Arabidopsis Description
DTX33Protein DETOXIFICATION 33 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX83]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.