CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0615700-01	Rice	plasma membrane	83.17	85.0
TraesCS5B01G033600.1	Wheat	plasma membrane	78.86	80.44
TraesCS5A01G033400.1	Wheat	peroxisome, plasma membrane, vacuole	78.47	80.04
TraesCS5D01G360400.1	Wheat	peroxisome, plasma membrane, vacuole	78.67	79.92
TraesCS5A01G353300.1	Wheat	peroxisome, plasma membrane, vacuole	78.67	79.92
TraesCS5D01G041700.1	Wheat	plasma membrane	78.28	79.84
TraesCS5B01G355700.1	Wheat	peroxisome, plasma membrane, vacuole	78.47	79.72
HORVU5Hr1G008770.1	Barley	plasma membrane	77.89	78.81
GSMUA_Achr8P03000_001	Banana	plasma membrane	67.91	69.68
GSMUA_Achr4P22990_001	Banana	plasma membrane	66.73	67.79
VIT_12s0028g01150.t01	Wine grape	plasma membrane	60.08	60.91
VIT_12s0028g01160.t01	Wine grape	peroxisome, plasma membrane, vacuole	58.71	59.29
AT3G59030.1	Thale cress	plasma membrane	57.34	57.79
Bra003361.1-P	Field mustard	plasma membrane	57.14	57.59
KRH14539	Soybean	plasma membrane	56.75	57.43
CDX67772	Canola	plasma membrane	56.95	57.4
CDX98344	Canola	plasma membrane	56.95	57.4
Solyc12g006360.1.1	Tomato	plasma membrane	55.97	56.86
PGSC0003DMT400074161	Potato	plasma membrane	52.45	56.07
EER91319	Sorghum	cytosol, peroxisome, plasma membrane	45.4	46.12
EER97294	Sorghum	endoplasmic reticulum, peroxisome, plasma membrane	43.84	45.16
EER91321	Sorghum	plasma membrane	43.84	44.71
KXG38133	Sorghum	cytosol, peroxisome, vacuole	45.01	44.57
KXG37120	Sorghum	plasma membrane	43.84	44.36
EER93896	Sorghum	cytosol, peroxisome, plasma membrane	45.4	44.27
OQU87609	Sorghum	plasma membrane	33.86	42.3
OQU85978	Sorghum	plasma membrane	33.07	40.72
KXG35815	Sorghum	plasma membrane	37.57	39.83
EER96891	Sorghum	cytosol, peroxisome, plasma membrane	36.99	38.89
EER96893	Sorghum	cytosol, peroxisome, vacuole	36.2	38.78
EER91211	Sorghum	plasma membrane	37.18	38.54
KXG25339	Sorghum	cytosol, peroxisome, plasma membrane	36.79	37.98
OQU93093	Sorghum	cytosol, peroxisome, plasma membrane	38.16	37.14
OQU86679	Sorghum	cytosol, peroxisome, plasma membrane	36.59	37.03
OQU80740	Sorghum	cytosol, peroxisome, plasma membrane	36.59	36.52
OQU85979	Sorghum	cytosol, peroxisome, vacuole	36.01	36.29
OQU80697	Sorghum	cytosol	37.77	36.28
EES15223	Sorghum	plasma membrane	35.81	36.02
EES15585	Sorghum	cytosol, peroxisome, plasma membrane	36.2	35.24
EES09180	Sorghum	cytosol, peroxisome, plasma membrane	35.81	34.59
OQU92001	Sorghum	peroxisome	34.44	33.33
KXG38740	Sorghum	plasma membrane	31.51	31.63

Protein Annotations

MapMan:24.2.4.1.1	EntrezGene:8071471	UniProt:A0A1Z5R850	ncoils:Coil	GO:GO:0000003	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0006810	GO:GO:0006855	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009705	GO:GO:0009791	GO:GO:0009987	GO:GO:0010023	GO:GO:0010231
GO:GO:0015238	GO:GO:0015297	GO:GO:0015299	GO:GO:0016020	GO:GO:0016021	GO:GO:0019748
GO:GO:0055085	GO:GO:1902600	InterPro:MATE_fam	EnsemblPlants:OQU79625	ProteinID:OQU79625	ProteinID:OQU79625.1
PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF85	EnsemblPlantsGene:SORBI_3008G171600	TIGRFAMs:TIGR00797	TMHMM:TMhelix
UniParc:UPI000B8B9C8D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:60536622..60539482

Molecular Weight (calculated)

55405.6 Da

IEP (calculated)

7.328

GRAVY (calculated)

0.816

Length

511 amino acids

Sequence
(BLAST)

001: MLDQKKFRTY REQTMGEGSI NVIAPLLDID ESSGASEVLL QQEPVPWGVL ARLAAWEAGN LWRISWASIL TTLFSFTLSL VTQMFVGHLG ELELAGASIT
101: NIGIQGLAYG VMIGMASAVQ TVCGQAYGAR RYAAMGIVCQ RALVLQLATA IPIAFLYWYA GPFLRLIGQE ADVAAAGQLY ARGLMPQLLA FTLFSPMQRF
201: LQAQNIVNPV AYITLAVLIF HTLASWLGVF VLGFGLLGAA LILSFSWWVL VVLTWGYIVW SPACKETWTG LSLLAFRGLW GYAKLAFASA VMLALEIWYV
301: QGFVLLTGFL PNSEIALDSL SICINYWNWD FNIMLGLSYA ASIRVGNELG ASHPKVARFS VIVVVVVSIA FSFLATLTVL ILRYPLSTLY TSSATVIEAV
401: ISLMPLMAIS IFLNGIQPIL SGVAIGSGWQ ATVAYVNVGA YYLIGLPIGC VLGYKTSLGA AGIWWGLIIG VAVQTIALVI LTARTNWDKE VEKAMQRLQQ
501: TAVVPVNDVI A

Best Arabidopsis Sequence Match ( AT3G59030.1 )
(BLAST)

001: MSSTETYEPL LTRLHSDSQI TERSSPEIEE FLRRRGSTVT PRWWLKLAVW ESKLLWTLSG ASIVVSVLNY MLSFVTVMFT GHLGSLQLAG ASIATVGIQG
101: LAYGIMLGMA SAVQTVCGQA YGARQYSSMG IICQRAMVLH LAAAVFLTFL YWYSGPILKT MGQSVAIAHE GQIFARGMIP QIYAFALACP MQRFLQAQNI
201: VNPLAYMSLG VFLLHTLLTW LVTNVLDFGL LGAALILSFS WWLLVAVNGM YILMSPNCKE TWTGFSTRAF RGIWPYFKLT VASAVMLCLE IWYNQGLVII
301: SGLLSNPTIS LDAISICMYY LNWDMQFMLG LSAAISVRVS NELGAGNPRV AMLSVVVVNI TTVLISSVLC VIVLVFRVGL SKAFTSDAEV IAAVSDLFPL
401: LAVSIFLNGI QPILSGVAIG SGWQAVVAYV NLVTYYVIGL PIGCVLGFKT SLGVAGIWWG MIAGVILQTL TLIVLTLKTN WTSEVENAAQ RVKTSATENQ
501: EMANAGV

Arabidopsis Description

DTX41Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VKA2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.