Factsheet for Os12t0615700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
vacuole 3
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79625	Sorghum	golgi, plasma membrane, vacuole	85.0	83.17
TraesCS5A01G353300.1	Wheat	peroxisome, plasma membrane, vacuole	83.2	82.7
TraesCS5A01G033400.1	Wheat	peroxisome, plasma membrane, vacuole	82.8	82.63
TraesCS5D01G360400.1	Wheat	peroxisome, plasma membrane, vacuole	83.0	82.5
TraesCS5B01G355700.1	Wheat	peroxisome, plasma membrane, vacuole	83.0	82.5
TraesCS5B01G033600.1	Wheat	plasma membrane	82.6	82.44
TraesCS5D01G041700.1	Wheat	plasma membrane	82.4	82.24
HORVU5Hr1G008770.1	Barley	plasma membrane	82.0	81.19
GSMUA_Achr8P03000_001	Banana	plasma membrane	71.0	71.29
GSMUA_Achr4P22990_001	Banana	plasma membrane	70.0	69.58
VIT_12s0028g01150.t01	Wine grape	plasma membrane	60.4	59.92
VIT_12s0028g01160.t01	Wine grape	peroxisome, plasma membrane, vacuole	60.0	59.29
KRH14539	Soybean	plasma membrane	58.8	58.22
Bra003361.1-P	Field mustard	plasma membrane	58.6	57.79
AT3G59030.1	Thale cress	plasma membrane	58.4	57.59
CDX67772	Canola	plasma membrane	58.4	57.59
CDX98344	Canola	plasma membrane	58.2	57.4
Solyc12g006360.1.1	Tomato	plasma membrane	57.2	56.86
PGSC0003DMT400074161	Potato	plasma membrane	53.4	55.86
Os03t0571700-01	Rice	golgi, peroxisome, plasma membrane	34.8	47.03
Os03t0572900-01	Rice	plasma membrane	45.6	45.6
Os03t0570800-01	Rice	cytosol, peroxisome, plasma membrane	45.2	45.2
Os07t0516600-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane	44.0	44.62
Os03t0571900-01	Rice	plasma membrane	46.4	44.62
Os08t0562800-01	Rice	peroxisome, plasma membrane, vacuole	35.2	39.02
Os09t0468000-01	Rice	plasma membrane	37.4	38.8
Os08t0480000-01	Rice	plasma membrane	37.6	38.45
Os10t0195000-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	35.0	37.72
Os11t0129000-00	Rice	peroxisome, plasma membrane	35.4	37.66
Os01t0766000-00	Rice	mitochondrion	41.0	37.55
Os11t0126100-01	Rice	cytosol, peroxisome, plasma membrane	36.6	36.82
Os08t0550200-01	Rice	cytosol, peroxisome, plasma membrane	38.2	36.59
Os12t0126000-01	Rice	cytosol, peroxisome, plasma membrane	36.8	36.29
Os03t0626700-01	Rice	golgi, plasma membrane, vacuole	34.6	36.27
Os02t0821600-00	Rice	plasma membrane	30.0	30.55
Os12t0125800-00	Rice	golgi, peroxisome	10.8	30.0

Protein Annotations

MapMan:24.2.4.1.1	EntrezGene:4352793	ProteinID:ABA99853.1	EMBL:AK058512	ProteinID:BAF30295.1	ProteinID:BAT18094.1
ProteinID:EAZ21225.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810	GO:GO:0006855
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009705	GO:GO:0009791
GO:GO:0009987	GO:GO:0010023	GO:GO:0010231	GO:GO:0015238	GO:GO:0015297	GO:GO:0015299
GO:GO:0016020	GO:GO:0016021	GO:GO:0019748	GO:GO:0055085	GO:GO:1902600	InterPro:MATE_fam
EnsemblPlantsGene:Os12g0615700	EnsemblPlants:Os12t0615700-01	PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF85	UniProt:Q2QM65
TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0000680C24	RefSeq:XP_015618623.1	RefSeq:XP_015618624.1	SEG:seg

Description

Similar to TRANSPARENT TESTA 12 protein. (Os12t0615700-01)

Coordinates

chr12:+:26120373..26122888

Molecular Weight (calculated)

54105.0 Da

IEP (calculated)

6.752

GRAVY (calculated)

0.848

Length

500 amino acids

Sequence
(BLAST)

001: MAETSSARSP LLDVDESSGA SEELLRREPV PRSVLSRLAA WEAGNLWRIS WASILITLLS FTLSLVTQMF VGHLGELELA GASITNIGIQ GLAYGIMIGM
101: ASAVQTVCGQ AYGARKFRAM GIVCQRALVL QFATAIVIAF LYWYAGPFLR LIGQAADVAA AGQLYARGLV PQLLAFALFC PMQRFLQAQN IVNPVAYITM
201: AVLIFHILIS WLTVFVLGFG LLGAALTLSF SWWVLVALTW GLMVWTPACK ETWTGLSVLA FRGLWGYAKL AFASAVMLAL EIWYVQGFVL LTGFLPDPEI
301: ALDSLSICIN YWNWDFQIML GLSYAASIRV GNELGAGHPN VARFSVFVVI TASVAFSILA TILVLVLRYP LSTLYTSSTT VIEAVIKLTP LLSISIFLNG
401: IQPILSGVAV GSGWQVVVAY VNVGAYYLIG LPIGCVLGYK TSLGAAGIWW GLIIGVSVQT VALIIITART NWDNEVMKAI QRLRQTAVDD GTVPIVDDIE

Best Arabidopsis Sequence Match ( AT3G59030.1 )
(BLAST)

001: MSSTETYEPL LTRLHSDSQI TERSSPEIEE FLRRRGSTVT PRWWLKLAVW ESKLLWTLSG ASIVVSVLNY MLSFVTVMFT GHLGSLQLAG ASIATVGIQG
101: LAYGIMLGMA SAVQTVCGQA YGARQYSSMG IICQRAMVLH LAAAVFLTFL YWYSGPILKT MGQSVAIAHE GQIFARGMIP QIYAFALACP MQRFLQAQNI
201: VNPLAYMSLG VFLLHTLLTW LVTNVLDFGL LGAALILSFS WWLLVAVNGM YILMSPNCKE TWTGFSTRAF RGIWPYFKLT VASAVMLCLE IWYNQGLVII
301: SGLLSNPTIS LDAISICMYY LNWDMQFMLG LSAAISVRVS NELGAGNPRV AMLSVVVVNI TTVLISSVLC VIVLVFRVGL SKAFTSDAEV IAAVSDLFPL
401: LAVSIFLNGI QPILSGVAIG SGWQAVVAYV NLVTYYVIGL PIGCVLGFKT SLGVAGIWWG MIAGVILQTL TLIVLTLKTN WTSEVENAAQ RVKTSATENQ
501: EMANAGV

Arabidopsis Description

DTX41Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VKA2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.