Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- plasma membrane 3
- extracellular 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0200500-01 | |
| Os05t0520100-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G21690.1 | Os01t0200500-01 | AT3G16310.1 | 21798944 |
| AT3G21690.1 | Os05t0520100-00 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G247700.2 | Wheat | plasma membrane | 86.82 | 86.82 |
| TraesCS2D01G228200.1 | Wheat | plasma membrane | 86.0 | 86.0 |
| TraesCS2A01G222300.1 | Wheat | plasma membrane | 85.8 | 85.8 |
| EER97294 | Sorghum | endoplasmic reticulum, peroxisome, plasma membrane | 85.19 | 84.68 |
| HORVU2Hr1G046420.16 | Barley | plasma membrane | 83.16 | 83.0 |
| Zm00001d006494_P004 | Maize | plasma membrane | 84.18 | 73.19 |
| Os03t0570800-01 | Rice | cytosol, peroxisome, plasma membrane | 66.94 | 66.0 |
| CDY33131 | Canola | golgi, plasma membrane, vacuole | 23.53 | 65.91 |
| Os03t0572900-01 | Rice | plasma membrane | 66.73 | 65.8 |
| Os03t0571700-01 | Rice | golgi, peroxisome, plasma membrane | 47.67 | 63.51 |
| KRH26788 | Soybean | plasma membrane | 63.29 | 61.9 |
| Os03t0571900-01 | Rice | plasma membrane | 64.5 | 61.15 |
| VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 62.68 | 60.95 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 62.27 | 60.67 |
| CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 61.87 | 60.4 |
| Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 61.26 | 60.04 |
| Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 61.46 | 60.0 |
| VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 61.66 | 59.96 |
| Bra001840.1-P | Field mustard | plasma membrane | 55.58 | 59.96 |
| CDX92916 | Canola | cytosol, plasma membrane, vacuole | 61.26 | 59.8 |
| CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 60.04 | 59.8 |
| Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 60.45 | 59.72 |
| KRH56125 | Soybean | plasma membrane | 62.47 | 59.57 |
| CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 60.65 | 59.44 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 58.22 | 59.3 |
| Solyc12g005850.1.1 | Tomato | plasma membrane | 61.26 | 58.98 |
| CDY38631 | Canola | cytosol, peroxisome, vacuole | 61.05 | 58.79 |
| VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 61.26 | 58.64 |
| Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 59.43 | 58.6 |
| CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 61.05 | 58.56 |
| Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 57.81 | 58.52 |
| CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 37.53 | 58.36 |
| CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 60.45 | 57.98 |
| CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 36.92 | 57.41 |
| CDY33130 | Canola | cytosol, peroxisome, vacuole | 34.89 | 55.84 |
| CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 33.67 | 54.61 |
| KRH25385 | Soybean | plasma membrane | 48.28 | 53.97 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 57.2 | 53.82 |
| Os08t0562800-01 | Rice | peroxisome, plasma membrane, vacuole | 42.8 | 46.78 |
| Os12t0615700-01 | Rice | plasma membrane | 44.62 | 44.0 |
| Os03t0626700-01 | Rice | golgi, plasma membrane, vacuole | 41.99 | 43.4 |
| Os10t0195000-01 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 40.16 | 42.67 |
| Os11t0129000-00 | Rice | peroxisome, plasma membrane | 40.57 | 42.55 |
| VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 59.03 | 42.3 |
| Os08t0550200-01 | Rice | cytosol, peroxisome, plasma membrane | 44.62 | 42.15 |
| Os09t0468000-01 | Rice | plasma membrane | 41.18 | 42.12 |
| Os11t0126100-01 | Rice | cytosol, peroxisome, plasma membrane | 40.97 | 40.64 |
| Os08t0480000-01 | Rice | plasma membrane | 39.35 | 39.67 |
| Os12t0126000-01 | Rice | cytosol, peroxisome, plasma membrane | 39.96 | 38.86 |
| Os01t0766000-00 | Rice | mitochondrion | 42.19 | 38.1 |
| Os12t0125800-00 | Rice | golgi, peroxisome | 13.79 | 37.78 |
| Os02t0821600-00 | Rice | plasma membrane | 33.06 | 33.2 |
Protein Annotations
| MapMan:24.2.4.1.1 | EntrezGene:4343383 | EMBL:AK120864 | ProteinID:BAF21699.1 | ProteinID:BAT01766.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006855 | GO:GO:0008150 |
| GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:MATE_fam |
| EnsemblPlantsGene:Os07g0516600 | EnsemblPlants:Os07t0516600-01 | PFAM:PF01554 | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF201 | UniProt:Q0D624 |
| TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI0000E12B3E | RefSeq:XP_015645379.1 | SEG:seg | : |
Description
Multi antimicrobial extrusion protein MatE family protein. (Os07t0516600-01)
Coordinates
chr7:+:19911366..19914456
Molecular Weight (calculated)
51875.1 Da
IEP (calculated)
8.461
GRAVY (calculated)
0.763
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHAVDGRLE ALLSGGGGGG EAAAPWARRM AAAAALELRL LAPLAAPAVV VYMLIIVMSS ATQIFCGQLG NVQLAASSLG NNGIQVFAYG LMLGMGSAVE
101: TLCGQAYGAG RHEMLGVYLQ RSAVLLTAAG VPLAALYACS ERVLLLLGQS PEISRAAAGF ARGLIPQIFA YAANFPIQKF LQAQSIVAPS AAVLAASFAL
201: HLPLSWAAVR VLGLGLPGAA LALSATWWVL VAGQFAYIVR SPRCAATWTG FTWAAFHDLA AFARLSAASA VMLALEVWYF QVLILLAGML PDPQIALDAL
301: TVCTSIQSWV FMISVGFNAA ASVRVGNELG AGNPRSAAFS TWMVTALSAI IAAIAGVVVI LLRDKLSYIF TQGEAVSRAV SDLCPLLVGT IVLCGIQPVL
401: SGVAVGCGWQ ALVAYINIGC YYLIGLPLGV LLGFKFDYGI KGLWGGMIGG TLIQTLILIW ITFRTDWNKE VEDARRRLDK WDDTKQPLLV NRQ
101: TLCGQAYGAG RHEMLGVYLQ RSAVLLTAAG VPLAALYACS ERVLLLLGQS PEISRAAAGF ARGLIPQIFA YAANFPIQKF LQAQSIVAPS AAVLAASFAL
201: HLPLSWAAVR VLGLGLPGAA LALSATWWVL VAGQFAYIVR SPRCAATWTG FTWAAFHDLA AFARLSAASA VMLALEVWYF QVLILLAGML PDPQIALDAL
301: TVCTSIQSWV FMISVGFNAA ASVRVGNELG AGNPRSAAFS TWMVTALSAI IAAIAGVVVI LLRDKLSYIF TQGEAVSRAV SDLCPLLVGT IVLCGIQPVL
401: SGVAVGCGWQ ALVAYINIGC YYLIGLPLGV LLGFKFDYGI KGLWGGMIGG TLIQTLILIW ITFRTDWNKE VEDARRRLDK WDDTKQPLLV NRQ
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.