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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • cytosol 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra027174.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 Bra027174.1-P AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92916 Canola cytosol, plasma membrane, vacuole 98.69 89.31
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 93.65 84.75
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 90.37 82.77
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 87.75 82.34
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 90.81 82.02
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 87.53 80.0
GSMUA_Achr6P00360_001 Banana vacuole 63.68 71.5
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 76.81 69.78
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 73.3 69.21
KRH26788 Soybean plasma membrane 76.15 69.05
KRH25385 Soybean plasma membrane 66.52 68.93
Solyc12g005850.1.1 Tomato plasma membrane 76.37 68.16
KRH56125 Soybean plasma membrane 76.37 67.5
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 73.96 66.67
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 75.71 66.41
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 73.3 66.08
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 70.9 65.85
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 70.9 65.85
Os03t0572900-01 Rice plasma membrane 71.33 65.2
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 70.9 65.19
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 72.43 65.03
EER91319 Sorghum cytosol, peroxisome, plasma membrane 71.55 65.01
KXG38133 Sorghum cytosol, peroxisome, vacuole 73.3 64.92
Os03t0571900-01 Rice plasma membrane 73.74 64.81
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 72.65 64.72
VIT_12s0059g02160.t01 Wine grape plasma membrane 72.87 64.66
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 72.21 64.45
KXG37120 Sorghum plasma membrane 71.12 64.36
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 69.15 64.1
TraesCS3D01G506100.1 Wheat plasma membrane 69.8 64.06
TraesCS3A01G499200.1 Wheat plasma membrane 69.58 63.86
Zm00001d033063_P001 Maize vacuole 69.8 63.8
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 70.9 63.78
TraesCS3B01G562400.2 Wheat plasma membrane 69.37 63.65
GSMUA_Achr9P11610_001 Banana plasma membrane 68.93 63.64
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 69.15 63.58
Zm00001d013809_P002 Maize plasma membrane 69.15 63.58
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 68.93 63.51
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 69.15 63.45
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 68.93 63.13
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 68.93 63.13
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 68.71 62.93
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 68.27 62.78
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 72.43 62.69
PGSC0003DMT400022543 Potato plasma membrane 71.77 62.6
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 68.49 62.48
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 68.27 62.4
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 68.05 62.32
EER91321 Sorghum plasma membrane 68.27 62.28
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 70.24 62.21
TraesCSU01G124400.1 Wheat plasma membrane, plastid 67.83 62.0
TraesCS4B01G388800.1 Wheat plasma membrane 67.61 61.92
Zm00001d021629_P003 Maize plasma membrane 69.37 61.79
TraesCS5A01G553200.1 Wheat plasma membrane 67.4 61.72
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 68.71 61.21
GSMUA_Achr4P23760_001 Banana plasma membrane 61.49 61.09
Bra016823.1-P Field mustard plasma membrane 42.23 61.08
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 68.49 61.01
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 68.27 60.7
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 67.83 60.55
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 66.52 60.08
EER93896 Sorghum cytosol, peroxisome, plasma membrane 67.4 58.78
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 47.48 58.65
TraesCS3B01G485100.1 Wheat plasma membrane 70.68 58.62
TraesCS2B01G247700.2 Wheat plasma membrane 62.8 58.22
Bra038747.1-P Field mustard plasma membrane 46.17 57.97
Bra031776.1-P Field mustard plasma membrane 62.36 57.81
TraesCS2A01G222300.1 Wheat plasma membrane 62.36 57.81
TraesCS2D01G228200.1 Wheat plasma membrane 62.36 57.81
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 71.99 57.72
HORVU2Hr1G046420.16 Barley plasma membrane 62.14 57.49
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 62.14 57.26
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 61.49 56.09
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 59.96 55.58
Bra028379.1-P Field mustard plasma membrane 60.61 55.29
Zm00001d006493_P001 Maize plasma membrane 68.93 55.26
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 60.83 54.51
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 57.55 53.46
Bra020862.1-P Field mustard plasma membrane 58.42 53.19
Bra020863.1-P Field mustard plasma membrane 57.99 52.27
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 57.77 52.07
Zm00001d006494_P004 Maize plasma membrane 62.36 50.26
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 69.8 46.37
Bra025214.1-P Field mustard plasma membrane 42.01 45.82
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 46.83 44.21
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 44.42 43.1
Bra040003.1-P Field mustard plasma membrane 33.92 42.82
Bra003361.1-P Field mustard plasma membrane 47.05 42.41
Bra037814.1-P Field mustard plasma membrane 43.98 41.61
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 42.89 41.44
Bra006059.1-P Field mustard plasma membrane 43.76 41.07
Bra040000.1-P Field mustard plasma membrane 35.89 40.9
Bra024381.1-P Field mustard plasma membrane 42.89 40.5
Bra040001.1-P Field mustard plasma membrane 42.67 39.55
Bra013906.1-P Field mustard plasma membrane 42.23 39.47
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 44.2 39.38
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 42.23 39.07
Bra019147.1-P Field mustard plasma membrane 40.92 38.32
Bra009034.1-P Field mustard plasma membrane 35.89 38.23
Bra024379.1-P Field mustard plasma membrane 43.98 35.39
Bra006058.1-P Field mustard plasma membrane 40.26 34.98
Bra010453.1-P Field mustard plasma membrane 36.76 34.43
Bra028589.1-P Field mustard peroxisome 31.07 34.22
Bra031982.1-P Field mustard plasma membrane 37.2 34.07
Bra013957.1-P Field mustard plasma membrane 36.76 33.8
Bra036449.1-P Field mustard plasma membrane 36.76 33.73
Bra023633.1-P Field mustard plasma membrane 35.23 33.61
Bra013572.1-P Field mustard golgi 54.92 24.46
Protein Annotations
MapMan:24.2.4.1.1EnsemblPlantsGene:Bra001840EnsemblPlants:Bra001840.1EnsemblPlants:Bra001840.1-PGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4CCB0InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF200TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002540649SEG:seg
Description
AT3G21690 (E=1e-210) | MATE efflux family protein
Coordinates
chrA03:+:18792388..18796560
Molecular Weight (calculated)
49625.6 Da
IEP (calculated)
5.862
GRAVY (calculated)
0.806
Length
457 amino acids
Sequence
(BLAST)
001: MDSSQYDVVY QPLLQPQLSP LPESNNGELE RVLSDLETPL FPRLRKATMI ESKLLFKLAA PAVIVYMINY LMSMSTQIFS GHLGNLELAA ASLGNTGIQV
101: FAYGLMLGMG SAVETLCGQA FGGRKYDMLG VYLQRSAVLL TLTGVLLTII YVFSKPILLF LGESPEIASA ASLFVYGLIP QIFAYAMNFP IQKFLQAQSI
201: VAPSAYIATG TLFVHLLLSW LAVYKLGWGL LGASLVLSLS WWIIVVAQFV YIVTSERCRE TWRGFSVQAF SGLPSFFKLS AASAVMLCLE TWYFQILVLL
301: AGLLEDPELA LDSLSICMTI SGWVFMISVG FNAAISVRVS NELGAGNPKS AAFSVIIVNI YSFITCVILA IVILACRDVL SYAFTEGEKV SAAVSELCPL
401: LALTLILNGI QPVLSGVAVG CGWQTFVAKV NVGCYYIVGI PLGALFGFYF KFDAKAR
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.