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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane, plastid
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_09s0002g03770.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 VIT_09s0002g03770.t01 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 97.04 97.04
VIT_12s0059g02160.t01 Wine grape plasma membrane 82.45 81.17
GSMUA_Achr6P00360_001 Banana vacuole 63.51 79.12
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 75.15 75.75
KRH26788 Soybean plasma membrane 75.15 75.6
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 71.99 75.41
CDY24250 Canola cytosol, peroxisome, plasma membrane 47.14 75.39
CDY33130 Canola cytosol, peroxisome, vacuole 45.76 75.32
Solyc12g005850.1.1 Tomato plasma membrane 75.94 75.2
CDY69153 Canola cytosol, peroxisome, plasma membrane 46.75 74.76
Bra001840.1-P Field mustard plasma membrane 66.67 73.96
VIT_10s0116g01880.t01 Wine grape plasma membrane 73.77 73.48
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 72.19 73.35
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 73.18 73.32
CDY38631 Canola cytosol, peroxisome, vacuole 73.37 72.66
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 74.16 72.17
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 71.79 72.08
EER91319 Sorghum cytosol, peroxisome, plasma membrane 71.4 71.97
KRH56125 Soybean plasma membrane 73.37 71.95
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 69.82 71.95
CDY33129 Canola cytosol, peroxisome, plasma membrane 71.6 71.88
CDX92916 Canola cytosol, plasma membrane, vacuole 71.4 71.68
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 69.43 71.54
CDY39494 Canola cytosol, peroxisome, plasma membrane 72.39 71.4
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 69.43 71.4
CDY19295 Canola cytosol, peroxisome, plasma membrane 42.8 71.38
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 68.44 71.25
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 69.82 71.23
GSMUA_Achr9P11610_001 Banana plasma membrane 69.43 71.11
CDY19294 Canola cytosol, peroxisome, plasma membrane 71.99 71.01
Os03t0572900-01 Rice plasma membrane 70.02 71.0
VIT_10s0116g01870.t01 Wine grape plastid 71.4 70.98
VIT_10s0116g01860.t01 Wine grape plasma membrane 70.22 70.63
Zm00001d013809_P002 Maize plasma membrane 69.23 70.62
Zm00001d033063_P001 Maize vacuole 69.43 70.4
CDY65669 Canola cytosol, peroxisome, plasma membrane 68.64 70.3
CDY39493 Canola cytosol, peroxisome, plasma membrane 69.43 69.98
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 70.61 69.79
Os03t0571900-01 Rice plasma membrane 71.2 69.42
KXG38133 Sorghum cytosol, peroxisome, vacuole 70.61 69.38
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 94.08 69.33
CDY33131 Canola golgi, plasma membrane, vacuole 24.06 69.32
Zm00001d021629_P003 Maize plasma membrane 70.02 69.2
TraesCSU01G124400.1 Wheat plasma membrane, plastid 68.24 69.2
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 67.65 69.15
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 69.23 69.09
PGSC0003DMT400022543 Potato plasma membrane 71.4 69.08
TraesCS3A01G499200.1 Wheat plasma membrane 67.85 69.08
TraesCS3D01G506100.1 Wheat plasma membrane 67.85 69.08
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 67.85 69.08
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 68.05 69.0
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 69.23 68.96
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 67.85 68.94
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 67.85 68.94
KXG37120 Sorghum plasma membrane 68.64 68.91
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 67.46 68.81
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 67.46 68.81
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 67.65 68.74
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 67.65 68.74
TraesCS4B01G388800.1 Wheat plasma membrane 67.65 68.74
TraesCS3B01G562400.2 Wheat plasma membrane 67.46 68.67
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 67.85 68.66
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 69.23 68.55
TraesCS5A01G553200.1 Wheat plasma membrane 67.46 68.54
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 67.46 68.4
GSMUA_Achr4P23760_001 Banana plasma membrane 61.74 68.04
EER91321 Sorghum plasma membrane 66.86 67.66
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 70.41 67.61
KRH25385 Soybean plasma membrane 58.78 67.57
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 67.85 67.06
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 67.65 66.86
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 67.46 66.8
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 67.46 66.28
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 66.67 65.76
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 64.89 65.02
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 47.14 64.59
TraesCS2B01G247700.2 Wheat plasma membrane 62.72 64.5
TraesCS2A01G222300.1 Wheat plasma membrane 62.52 64.3
TraesCS2D01G228200.1 Wheat plasma membrane 62.52 64.3
EER93896 Sorghum cytosol, peroxisome, plasma membrane 65.29 63.17
HORVU2Hr1G046420.16 Barley plasma membrane 61.14 62.75
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 61.34 62.7
TraesCS3B01G485100.1 Wheat plasma membrane 67.65 62.25
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 59.96 61.66
Zm00001d006493_P001 Maize plasma membrane 69.03 61.4
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 59.17 58.82
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 64.89 57.72
Zm00001d006494_P004 Maize plasma membrane 61.54 55.03
VIT_18s0001g11760.t01 Wine grape plasma membrane 48.72 51.57
VIT_12s0028g01160.t01 Wine grape peroxisome, plasma membrane, vacuole 47.34 47.43
VIT_12s0028g01150.t01 Wine grape plasma membrane 47.14 47.42
VIT_00s0225g00050.t01 Wine grape cytosol, peroxisome, plasma membrane 47.34 47.15
VIT_00s0225g00060.t01 Wine grape plasma membrane 47.53 47.07
VIT_00s0225g00080.t01 Wine grape cytosol, peroxisome, plasma membrane 47.14 46.32
VIT_08s0056g00890.t01 Wine grape plasma membrane 39.25 46.06
VIT_18s0001g06790.t01 Wine grape plasma membrane 44.38 45.92
VIT_00s0225g00070.t01 Wine grape plasma membrane 45.36 45.91
VIT_16s0050g00930.t01 Wine grape plasma membrane 43.79 45.03
VIT_16s0050g00910.t01 Wine grape plasma membrane 43.39 44.99
VIT_08s0056g00780.t01 Wine grape golgi, peroxisome, plasma membrane 43.59 44.65
VIT_16s0050g00900.t01 Wine grape plasma membrane 43.0 44.58
VIT_08s0056g01000.t01 Wine grape plasma membrane, vacuole 36.49 44.47
VIT_15s0046g01800.t01 Wine grape plasma membrane 40.43 42.44
VIT_18s0001g06820.t01 Wine grape plasma membrane 40.04 41.94
VIT_08s0056g01070.t01 Wine grape plasma membrane 40.04 41.86
VIT_08s0056g01120.t01 Wine grape plasma membrane 38.46 40.21
VIT_08s0056g00870.t01 Wine grape cytosol, peroxisome, plasma membrane 38.26 39.84
VIT_08s0056g01040.t01 Wine grape golgi, peroxisome, plasma membrane 29.98 39.38
VIT_08s0056g01080.t01 Wine grape plasma membrane 37.87 37.43
Protein Annotations
EntrezGene:100241387wikigene:100241387EntrezGene:100265485wikigene:100265485MapMan:24.2.4.1.1EMBL:AM432555
EMBL:AM487247ProteinID:CAN69305ProteinID:CAN69305.1ProteinID:CAN73203ProteinID:CAN73203.1ProteinID:CCB52038
ProteinID:CCB52038.1ncoils:CoilUniProt:F6HIJ2EMBL:FN595765GO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085EntrezGene:LOC100241387wikigene:LOC100241387EntrezGene:LOC100265485
wikigene:LOC100265485InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF188TIGRFAMs:TIGR00797
TMHMM:TMhelixUniParc:UPI00015CB1DCArrayExpress:VIT_12s0059g02220EnsemblPlantsGene:VIT_12s0059g02220EnsemblPlants:VIT_12s0059g02220.t01RefSeq:XP_002279487
RefSeq:XP_002279487.1RefSeq:XP_003633309RefSeq:XP_003633309.1SEG:seg::
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6HIJ2]
Coordinates
chr12:+:7024882..7027768
Molecular Weight (calculated)
54632.9 Da
IEP (calculated)
7.866
GRAVY (calculated)
0.742
Length
507 amino acids
Sequence
(BLAST)
001: MESSRDGVNE PMLQSNPPLS SEGRSETSGQ LESILSDTRL PFCQRLLEAT STESKLLFRL AGPAVAVYMI NYLMSMSTQI FAGHLGNLEL AAASLGNTGV
101: QMFAYGLMLG MGSAVETLCG QAFGAQKFEM LGIYLQKSTV LLTITGFLLT FIYIFCKPIL ILLGESSEIA SAAAIFVYGL IPQIYAYAAN FPIQKFLQAQ
201: SIVAPSAYIS AATLLLHLLL SWVAVYKIGL GLVGSSLVLS LSWWIIVVAQ FFYIVKSEKC KYTWGGFSMK AVSGLCGFFK LSAASAVMLC LETWYFQILV
301: LLAGLLENPK VALDALSICM TILGFVFMIS VGFNAAASVR VGNELGAGHP KSAAFSVVVV TLVSFLISVV AAAVVLVLRH VISYAFTGGE TVAQAVSDLC
401: PVLAITLMLN GIQPVLSGVA VGCGWQAFVA YVNVGCYYIV GVPLGSLLGF YFKLGAKGIW LGMLGGTLMQ TFILIWVTAR TNWNKEVEKA KERMEKWDDK
501: KQPLLMD
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.