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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, vacuole

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
Zm00001d008871_P001
Zm00001d010783_P001
Zm00001d038803_P001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 Zm00001d008871_P001 AT3G16310.1 21798944
AT3G21690.1 Zm00001d010783_P001 AT3G16310.1 21798944
AT3G21690.1 Zm00001d038803_P001 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d033063_P001 Maize vacuole 90.67 89.4
Zm00001d013809_P002 Maize plasma membrane 89.25 88.53
EER91319 Sorghum cytosol, peroxisome, plasma membrane 89.25 87.48
Os03t0572900-01 Rice plasma membrane 84.99 83.8
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 82.76 82.93
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 81.95 82.11
TraesCS3D01G506100.1 Wheat plasma membrane 82.35 81.53
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 82.15 81.49
GSMUA_Achr6P00360_001 Banana vacuole 67.14 81.33
TraesCS3B01G562400.2 Wheat plasma membrane 82.15 81.33
TraesCS3A01G499200.1 Wheat plasma membrane 81.95 81.12
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 80.32 79.36
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 79.72 78.76
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 79.51 78.71
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 79.31 78.67
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 79.31 78.67
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 79.11 78.63
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 79.51 78.24
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 78.9 77.96
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 78.7 77.76
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 79.72 76.16
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 76.67 72.55
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 75.05 72.12
CDY33131 Canola golgi, plasma membrane, vacuole 25.36 71.02
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 69.37 70.66
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 71.81 70.38
KRH26788 Soybean plasma membrane 71.81 70.24
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 72.01 70.02
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 74.44 69.51
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 71.4 69.43
Bra001840.1-P Field mustard plasma membrane 64.1 69.15
Zm00001d021629_P003 Maize plasma membrane 71.81 69.01
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 70.79 68.97
GSMUA_Achr4P23760_001 Banana plasma membrane 64.3 68.91
CDY69153 Canola cytosol, peroxisome, plasma membrane 44.22 68.77
CDY24250 Canola cytosol, peroxisome, plasma membrane 44.22 68.77
Solyc12g005850.1.1 Tomato plasma membrane 70.99 68.36
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 69.17 68.34
CDY33129 Canola cytosol, peroxisome, plasma membrane 69.98 68.32
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 69.98 68.32
CDY65669 Canola cytosol, peroxisome, plasma membrane 68.36 68.08
CDX92916 Canola cytosol, plasma membrane, vacuole 69.57 67.92
KRH56125 Soybean plasma membrane 71.2 67.89
CDY39493 Canola cytosol, peroxisome, plasma membrane 69.17 67.79
CDY38631 Canola cytosol, peroxisome, vacuole 70.39 67.77
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 66.94 67.76
CDY39494 Canola cytosol, peroxisome, plasma membrane 70.59 67.7
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 69.37 67.59
CDY19294 Canola cytosol, peroxisome, plasma membrane 69.98 67.12
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 66.94 66.0
CDY33130 Canola cytosol, peroxisome, vacuole 41.18 65.91
VIT_12s0059g02160.t01 Wine grape plasma membrane 68.76 65.83
CDY19295 Canola cytosol, peroxisome, plasma membrane 39.76 64.47
PGSC0003DMT400022543 Potato plasma membrane 66.33 62.4
KRH25385 Soybean plasma membrane 55.38 61.9
Zm00001d006493_P001 Maize plasma membrane 71.2 61.58
Zm00001d006494_P004 Maize plasma membrane 67.14 58.38
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 68.76 49.27
Zm00001d050457_P002 Maize plasma membrane 45.03 45.96
Zm00001d053234_P001 Maize peroxisome 45.84 44.66
Zm00001d027982_P002 Maize cytosol, peroxisome, plasma membrane 43.81 44.44
Zm00001d012663_P001 Maize mitochondrion 45.03 43.44
Zm00001d033296_P002 Maize plasma membrane 41.78 41.62
Zm00001d005018_P001 Maize cytosol, peroxisome, plasma membrane 43.81 41.54
Zm00001d023277_P001 Maize cytosol, peroxisome, plasma membrane 43.0 39.77
Zm00001d030250_P001 Maize peroxisome 39.76 37.55
Zm00001d049910_P001 Maize cytosol, peroxisome, plasma membrane 39.35 32.6
Zm00001d051886_P001 Maize cytosol, peroxisome, plasma membrane 43.61 31.07
Protein Annotations
EntrezGene:103643608MapMan:24.2.4.1.1UniProt:A0A1D6KW48ncoils:CoilGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_famProteinID:ONM06702.1PFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF200TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004DE82D8EnsemblPlantsGene:Zm00001d033061
EnsemblPlants:Zm00001d033061_P002EnsemblPlants:Zm00001d033061_T002SEG:seg:::
Description
Protein DETOXIFICATION 40
Coordinates
chr1:-:249093563..249101622
Molecular Weight (calculated)
52996.4 Da
IEP (calculated)
5.663
GRAVY (calculated)
0.804
Length
493 amino acids
Sequence
(BLAST)
001: MAGDDGADAS ERLESILTAE AAASPWAAAA IELRLLTRLA APAVVMYMIN YLMSMSTQIF SGHLGNLELA AASLGNAGVQ MFAYGLMLGM GSAVETLCGQ
101: AYGAHKYEML GIYLQRSAVL LCVTGVPLAV IYAFSEPILV FLGQSPEIAR AASVFVYGLI PQIFAYAINF PIQKFMQAQS IVLPSAYIST VTLVLHVVLS
201: WVVVYKVGLG LLGASLLLSL SWWVIVAAQF AYIVMSPRCR HTWTGFTWQA FSGLWGFFKL SAASAVMLCL ETWYYQVLVL IAGLLPNPEL ALDALSVCMT
301: VNAWVFMIAV GFNAAASVRV SNELGAGHPK SAYFSVWVVT GVSTLISLVL AIVILCLRNY ISYIFTEGEV VSNAVADLCP LLAITLVLNG IQPVLSGVAV
401: GCGWQEFVAY VNVGCYYIVG VPLGAILGFV FKLGVKGIWS GMIGGTFMQT AILVWATLRT DWNKEVEEAQ KRLNKWADSK TTEPLLVGFG DGN
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.