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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra027174.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 Bra027174.1-P AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39494 Canola cytosol, peroxisome, plasma membrane 99.38 94.16
CDY19294 Canola cytosol, peroxisome, plasma membrane 97.95 92.8
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 93.84 91.58
Bra001840.1-P Field mustard plasma membrane 82.34 87.75
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 90.76 87.52
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 90.76 87.35
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 83.78 81.6
GSMUA_Achr6P00360_001 Banana vacuole 62.63 74.94
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 75.15 72.76
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 71.25 71.69
KRH26788 Soybean plasma membrane 74.13 71.63
KRH56125 Soybean plasma membrane 74.74 70.41
Solyc12g005850.1.1 Tomato plasma membrane 72.69 69.14
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 73.51 68.71
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 71.25 68.44
KRH25385 Soybean plasma membrane 61.81 68.25
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 71.05 68.24
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 68.58 67.89
EER91319 Sorghum cytosol, peroxisome, plasma membrane 70.02 67.79
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 68.38 67.68
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 69.2 67.67
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 68.79 67.4
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 68.79 67.4
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 68.99 67.33
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 68.99 67.33
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 68.38 67.14
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 68.38 67.0
Os03t0572900-01 Rice plasma membrane 68.79 67.0
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 70.02 66.99
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 67.76 66.94
Zm00001d033063_P001 Maize vacuole 68.58 66.8
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 68.38 66.73
Zm00001d013809_P002 Maize plasma membrane 67.97 66.6
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 68.17 66.53
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 68.38 66.47
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 69.82 66.41
KXG38133 Sorghum cytosol, peroxisome, vacuole 70.23 66.28
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 69.61 66.08
TraesCS3D01G506100.1 Wheat plasma membrane 67.56 66.06
TraesCS3A01G499200.1 Wheat plasma membrane 67.35 65.86
TraesCS3B01G562400.2 Wheat plasma membrane 67.15 65.66
VIT_12s0059g02160.t01 Wine grape plasma membrane 69.2 65.44
Os03t0571900-01 Rice plasma membrane 69.82 65.38
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 68.17 65.35
GSMUA_Achr9P11610_001 Banana plasma membrane 66.32 65.25
KXG37120 Sorghum plasma membrane 67.56 65.15
EER91321 Sorghum plasma membrane 66.53 64.67
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 65.71 64.0
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 67.15 63.74
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 68.99 63.64
GSMUA_Achr4P23760_001 Banana plasma membrane 59.96 63.48
PGSC0003DMT400022543 Potato plasma membrane 68.17 63.36
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 66.94 63.18
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 66.53 63.16
Zm00001d021629_P003 Maize plasma membrane 66.53 63.16
TraesCSU01G124400.1 Wheat plasma membrane, plastid 64.48 62.8
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 65.91 62.7
TraesCS4B01G388800.1 Wheat plasma membrane 64.07 62.53
TraesCS5A01G553200.1 Wheat plasma membrane 63.86 62.32
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 64.68 62.25
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 65.09 61.67
EER93896 Sorghum cytosol, peroxisome, plasma membrane 66.32 61.64
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 46.82 61.62
Bra016823.1-P Field mustard plasma membrane 39.84 61.39
TraesCS2B01G247700.2 Wheat plasma membrane 61.6 60.85
TraesCS2A01G222300.1 Wheat plasma membrane 61.4 60.65
Bra031776.1-P Field mustard plasma membrane 61.19 60.45
TraesCS2D01G228200.1 Wheat plasma membrane 61.19 60.45
TraesCS3B01G485100.1 Wheat plasma membrane 68.17 60.25
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 60.99 59.88
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 61.4 59.68
HORVU2Hr1G046420.16 Barley plasma membrane 59.75 58.91
Bra028379.1-P Field mustard plasma membrane 59.55 57.88
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 58.52 57.81
Zm00001d006493_P001 Maize plasma membrane 66.94 57.19
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 59.34 56.67
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 65.71 56.14
Bra020862.1-P Field mustard plasma membrane 57.49 55.78
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 55.44 54.88
Bra020863.1-P Field mustard plasma membrane 57.08 54.83
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 56.88 54.64
Bra038747.1-P Field mustard plasma membrane 40.66 54.4
Zm00001d006494_P004 Maize plasma membrane 61.4 52.73
Bra025214.1-P Field mustard plasma membrane 41.89 48.69
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 67.56 47.82
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 46.0 46.28
Bra003361.1-P Field mustard plasma membrane 47.02 45.17
Bra040003.1-P Field mustard plasma membrane 32.85 44.2
Bra024381.1-P Field mustard plasma membrane 43.12 43.39
Bra037814.1-P Field mustard plasma membrane 42.92 43.27
Bra040000.1-P Field mustard plasma membrane 35.52 43.14
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 41.27 42.49
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 41.07 42.46
Bra040001.1-P Field mustard plasma membrane 42.09 41.58
Bra006059.1-P Field mustard plasma membrane 41.48 41.48
Bra013906.1-P Field mustard plasma membrane 41.27 41.1
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 41.68 41.09
Bra009034.1-P Field mustard plasma membrane 35.52 40.33
Bra019147.1-P Field mustard plasma membrane 40.04 39.96
Bra037335.1-P Field mustard cytosol, peroxisome, plasma membrane, plastid 41.07 38.99
Bra024379.1-P Field mustard plasma membrane 42.71 36.62
Bra028589.1-P Field mustard peroxisome 31.01 36.39
Bra006058.1-P Field mustard plasma membrane 39.22 36.31
Bra010453.1-P Field mustard plasma membrane 36.14 36.07
Bra036449.1-P Field mustard plasma membrane 36.55 35.74
Bra031982.1-P Field mustard plasma membrane 36.55 35.67
Bra023633.1-P Field mustard plasma membrane 34.5 35.07
Bra013957.1-P Field mustard plasma membrane 35.52 34.81
Bra013572.1-P Field mustard golgi 54.0 25.63
Protein Annotations
MapMan:24.2.4.1.1EnsemblPlantsGene:Bra023866EnsemblPlants:Bra023866.1EnsemblPlants:Bra023866.1-PGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4E512InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF188TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002544538SEG:seg
Description
AT3G21690 (E=1e-204) | MATE efflux family protein
Coordinates
chrA01:-:20579989..20586827
Molecular Weight (calculated)
53050.5 Da
IEP (calculated)
5.751
GRAVY (calculated)
0.684
Length
487 amino acids
Sequence
(BLAST)
001: MAASQNDGVY QPLLHPQSDG TVPLSPSTES SNGELERVLS NVETPLFHRL RKATMIESKL LFKLAAPAVI VYMINYLMSM STQIFSGHLG TLELAAASLG
101: NTGIQIFAYG LMLGMGSAVE TLCGQAFGGR KYEMLGIYLQ RSTVLLTLTG VLLTLIYVFS KPILLFLGES PEIASAASIF VYGLIPQIFA YAVNFPIQKF
201: LQSQSIVAPS AYISTATLFV HLLLSWLAIY KLGMGLLGAS LVLSLSWWII VVAQFVYIVT SDRCRETWRW FSVQAFSGLP SFFKLSAASA VMLCLETWYF
301: QILVLLAGLL ENPELALDSL SICMTISGWV FMISVGFNAA ISVRVSNELG AGNPKSASFS VIIVNIYSLI TCVILAIVIL AFRDVLSYAF TEGEEVSAAV
401: SDLCPLLALT LVLNGIQPVL SGVAVGCGWQ TFVAKVNGIW TGMICGTLIQ TVILAWITFR TDWTKEVEES AKRLDKWSNK KPEVVPE
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.