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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane, plastid
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 99.81 94.29
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 99.03 93.55
AT4G00350.1 Thale cress cytosol, peroxisome, plasma membrane 89.86 85.06
VIT_15s0046g01800.t01 Wine grape plasma membrane 64.72 68.74
KRH00809 Soybean plasma membrane 64.33 65.35
KRH40412 Soybean plasma membrane 63.74 64.12
GSMUA_Achr7P04510_001 Banana plasma membrane 47.76 61.56
Bra013906.1-P Field mustard plasma membrane 58.67 61.55
Bra019147.1-P Field mustard plasma membrane 58.09 61.07
GSMUA_Achr1P15340_001 Banana plasma membrane 55.75 60.21
GSMUA_AchrUn_... Banana golgi, peroxisome, vacuole 57.5 58.3
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 55.56 55.99
HORVU6Hr1G091840.1 Barley plasma membrane 53.8 54.98
OQU85979 Sorghum cytosol, peroxisome, vacuole 53.8 54.44
TraesCS6B01G440300.1 Wheat plasma membrane 53.22 54.17
TraesCS6A01G400100.1 Wheat plasma membrane 53.41 54.04
TraesCS6D01G384300.1 Wheat plasma membrane 53.41 54.04
Os08t0562800-01 Rice peroxisome, plasma membrane, vacuole 47.37 53.88
TraesCS7B01G137200.1 Wheat plasma membrane 50.1 53.65
TraesCS7D01G469000.1 Wheat plasma membrane 49.51 53.25
TraesCS7D01G130700.1 Wheat plasma membrane 49.32 53.15
TraesCS7A01G241600.1 Wheat plasma membrane 49.51 53.03
TraesCS7A01G482100.1 Wheat plasma membrane 49.51 53.03
TraesCS7B01G032100.1 Wheat plasma membrane 49.51 53.03
TraesCS7D01G240600.1 Wheat plasma membrane 49.51 53.03
TraesCS6D01G384400.1 Wheat plastid 57.31 52.78
TraesCS7A01G131500.2 Wheat plasma membrane 48.93 52.73
TraesCS7B01G384300.1 Wheat plasma membrane 48.93 52.62
TraesCS6B01G440400.1 Wheat cytosol, peroxisome, plasma membrane 57.31 52.59
TraesCS6A01G400200.1 Wheat cytosol, peroxisome, plasma membrane 57.12 52.41
Bra010453.1-P Field mustard plasma membrane 49.71 52.25
TraesCS7D01G130800.1 Wheat plasma membrane 47.76 51.47
TraesCS7A01G131600.1 Wheat plasma membrane 47.76 51.47
TraesCS7B01G032300.1 Wheat plasma membrane 47.56 51.26
TraesCS2B01G612900.1 Wheat plasma membrane 47.95 51.25
Os02t0821600-00 Rice plasma membrane 48.93 51.12
OQU80697 Sorghum cytosol 51.66 49.81
OQU85978 Sorghum plasma membrane 39.96 49.4
HORVU0Hr1G022320.1 Barley plasma membrane 45.61 48.35
Bra025214.1-P Field mustard plasma membrane 39.18 47.97
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 44.83 47.52
HORVU7Hr1G049240.3 Barley peroxisome 48.54 45.03
Bra026945.1-P Field mustard cytosol, peroxisome, vacuole 41.13 44.8
Bra001840.1-P Field mustard plasma membrane 39.38 44.2
Bra040003.1-P Field mustard plasma membrane 30.99 43.92
Bra024381.1-P Field mustard plasma membrane 40.16 42.56
Bra024380.1-P Field mustard cytosol, peroxisome, plasma membrane 39.18 42.49
Bra037814.1-P Field mustard plasma membrane 39.77 42.24
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 40.94 42.08
Bra040000.1-P Field mustard plasma membrane 32.75 41.9
Bra006059.1-P Field mustard plasma membrane 39.57 41.68
Zm00001d049910_P001 Maize cytosol, peroxisome, plasma membrane 48.34 41.68
Zm00001d051886_P001 Maize cytosol, peroxisome, plasma membrane 55.95 41.47
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 38.99 41.07
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 40.16 40.79
Bra031776.1-P Field mustard plasma membrane 38.99 40.57
Bra009034.1-P Field mustard plasma membrane 33.92 40.56
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 39.38 40.32
Bra040001.1-P Field mustard plasma membrane 38.6 40.16
Bra038747.1-P Field mustard plasma membrane 28.46 40.11
Bra035477.1-P Field mustard peroxisome, plasma membrane, vacuole 38.6 40.08
Bra028379.1-P Field mustard plasma membrane 38.21 39.12
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 38.01 39.0
Bra016823.1-P Field mustard plasma membrane 23.2 37.66
Bra006058.1-P Field mustard plasma membrane 37.62 36.69
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 35.87 36.29
Bra020862.1-P Field mustard plasma membrane 35.48 36.26
Bra003361.1-P Field mustard plasma membrane 35.48 35.9
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 34.31 35.77
Bra020863.1-P Field mustard plasma membrane 35.09 35.5
Bra024379.1-P Field mustard plasma membrane 38.6 34.86
Bra028589.1-P Field mustard peroxisome 28.07 34.7
Bra031982.1-P Field mustard plasma membrane 32.75 33.67
Bra023633.1-P Field mustard plasma membrane 31.38 33.61
Bra013957.1-P Field mustard plasma membrane 32.36 33.4
Bra036449.1-P Field mustard plasma membrane 32.16 33.13
Bra013572.1-P Field mustard golgi 34.11 17.06
Protein Annotations
MapMan:24.2.4.1.1EnsemblPlantsGene:Bra037335EnsemblPlants:Bra037335.1EnsemblPlants:Bra037335.1-Pncoils:CoilGO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4F8C3InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF253TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002541AAF
SEG:seg:::::
Description
AT4G00350 (E=1e-233) | MATE efflux family protein
Coordinates
chrA09:-:1021153..1023209
Molecular Weight (calculated)
55844.6 Da
IEP (calculated)
5.077
GRAVY (calculated)
0.616
Length
513 amino acids
Sequence
(BLAST)
001: METPVREERI STSSSSGKPP QTINVPADDV IESGPSSPLL VRVSVFETEP NETTKLHHAP STLIGKTDDD DFPPITSFSD AKFVCMVESS KLWEIAAPIA
101: FNILCNYGVN SFTSIFVGHI GDLELSAVAI SLSVVSNFSF GFLLGMASAL ETLCGQAFGA GQIEMLGVYM QRSWLILIGT CFCLLPLYIY ATPLLILLGQ
201: EPQIAEISGK FTAQIIPQVF ALAINFPTKK FLQSQSKVGI LAWIGFVALT LHIFILHLFI NVFKWGLNGA AAAFVASAWG IAIAQLVYVV GWCKDGWRGL
301: SWLAFQDVWP FLKLSFASAV MLCLEIWYFM TIIVLTGHLE DPVLAVGSLS ICMNINGWEG MLFIGINAAI SVRVSNELGS GHPRAAKYSV IVTVIESLFI
401: GVVCAIVILI TRDDFAVIFT DSQEMRKAVA DLAYLLGITM ILNSLQPVIS GVAVGGGWQA PVAYINLICY YVFGLPLGFL LGYKTRLGVQ VEQASERMKQ
501: WGAGYEKLEK TVT
Best Arabidopsis Sequence Match ( AT4G00350.1 )
(BLAST)
001: MEIPVREERR SSSSSAGPLQ QTISLAADDA IDSGPSSPLV VKVSVFETEH ETTKLIHAPS TLLGETTGDA DFPPIQSFRD AKLVCVVETS KLWEIAAPIA
101: FNILCNYGVN SFTSIFVGHI GDLELSAVAI ALSVVSNFSF GFLLGMASAL ETLCGQAFGA GQMDMLGVYM QRSWLILLGT SVCLLPLYIY ATPLLILLGQ
201: EPEIAEISGK FTTQIIPQMF ALAINFPTQK FLQSQSKVGI MAWIGFFALT LHIFILYLFI NVFKWGLNGA AAAFDVSAWG IAIAQVVYVV GWCKDGWKGL
301: SWLAFQDVWP FLKLSFASAV MLCLEIWYFM TIIVLTGHLE DPVIAVGSLS ICMNINGWEG MLFIGINAAI SVRVSNELGS GHPRAAKYSV IVTVIESLVI
401: GVVCAIVILI TRDDFAVIFT ESEEMRKAVA DLAYLLGITM ILNSLQPVIS GVAVGGGWQA PVAYINLFCY YAFGLPLGFL LGYKTSLGVQ GIWIGMICGT
501: SLQTLILLYM IYITNWNKEV EQASERMKQW GAGYEKLEKI AT
Arabidopsis Description
DTX34Protein DETOXIFICATION 34 [Source:UniProtKB/Swiss-Prot;Acc:F4JH46]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.