Factsheet for Bra027073.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
vacuole 3
cytosol 1
plasma membrane 3
plastid 1
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19507	Canola	cytosol, plasma membrane, vacuole	99.6	99.6
CDY12916	Canola	cytosol, plasma membrane, vacuole	99.4	99.4
Bra028379.1-P	Field mustard	plasma membrane	94.21	94.21
AT1G61890.1	Thale cress	plasma membrane	94.01	94.01
Bra031776.1-P	Field mustard	plasma membrane	82.24	83.57
Bra016823.1-P	Field mustard	plasma membrane	48.5	76.9
VIT_10s0116g01880.t01	Wine grape	plasma membrane	68.86	67.78
Solyc02g080480.2.1	Tomato	cytosol, plasma membrane, vacuole	67.07	67.33
VIT_10s0116g01870.t01	Wine grape	plastid	67.47	66.27
Bra020862.1-P	Field mustard	plasma membrane	64.87	64.74
Bra031297.1-P	Field mustard	cytosol, peroxisome, vacuole	63.07	63.33
PGSC0003DMT400042439	Potato	cytosol, plasma membrane, vacuole	66.47	63.07
Bra038748.1-P	Field mustard	cytosol, peroxisome, plasma membrane	61.28	62.4
Bra038747.1-P	Field mustard	plasma membrane	45.11	62.09
Bra031296.1-P	Field mustard	cytosol, peroxisome, plasma membrane	62.48	61.98
Bra038749.1-P	Field mustard	peroxisome, plasma membrane, vacuole	62.67	61.93
Bra001840.1-P	Field mustard	plasma membrane	56.09	61.49
Bra023866.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.68	61.4
Bra023867.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.88	61.0
KRH11419	Soybean	plasma membrane	61.28	60.79
Bra020863.1-P	Field mustard	plasma membrane	60.48	59.76
Bra025214.1-P	Field mustard	plasma membrane	42.12	50.36
Bra040003.1-P	Field mustard	plasma membrane	34.93	48.34
Bra040000.1-P	Field mustard	plasma membrane	36.53	45.64
Bra024381.1-P	Field mustard	plasma membrane	43.51	45.04
Bra003361.1-P	Field mustard	plasma membrane	44.51	43.98
Bra026945.1-P	Field mustard	cytosol, peroxisome, vacuole	41.12	43.74
Bra037814.1-P	Field mustard	plasma membrane	42.12	43.69
Bra015613.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.92	43.39
Bra024380.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.72	43.13
Bra006059.1-P	Field mustard	plasma membrane	41.52	42.71
Bra040001.1-P	Field mustard	plasma membrane	41.92	42.6
Bra013906.1-P	Field mustard	plasma membrane	41.52	42.54
Bra035477.1-P	Field mustard	peroxisome, plasma membrane, vacuole	41.92	42.51
Bra009034.1-P	Field mustard	plasma membrane	36.13	42.19
Bra019147.1-P	Field mustard	plasma membrane	40.52	41.6
Bra037335.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	40.32	39.38
Bra028589.1-P	Field mustard	peroxisome	31.54	38.07
Bra010453.1-P	Field mustard	plasma membrane	36.73	37.7
Bra006058.1-P	Field mustard	plasma membrane	39.12	37.26
Bra024379.1-P	Field mustard	plasma membrane	41.92	36.97
Bra013957.1-P	Field mustard	plasma membrane	36.33	36.62
Bra036449.1-P	Field mustard	plasma membrane	36.13	36.35
Bra031982.1-P	Field mustard	plasma membrane	35.93	36.07
Bra023633.1-P	Field mustard	plasma membrane	34.33	35.91
Bra013572.1-P	Field mustard	golgi	59.28	28.95

Protein Annotations

MapMan:24.2.4.1.1	EnsemblPlantsGene:Bra027073	EnsemblPlants:Bra027073.1	EnsemblPlants:Bra027073.1-P	ncoils:Coil	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238
GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4EE62	InterPro:MATE_fam
PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF140	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI00025425DC

Description

AT1G61890 (E=2e-275) | MATE efflux family protein

Coordinates

chrA09:+:8211314..8214352

Molecular Weight (calculated)

55031.9 Da

IEP (calculated)

6.396

GRAVY (calculated)

0.668

Length

501 amino acids

Sequence
(BLAST)

001: MNSESLENLH RPLIESSKSF IDYRLETVLT DRELPYLRRI YLAMMIEMKF LFHLAAPAIF VYVINNGMSI LTRIFAGHVG SSQLAAASLG NSGFNMFTYG
101: LLLGMGSAVE TLCGQAHGAH RYEMLGVYLQ RSTVVLIITC LPMSLLFIFS KPLLNTLGEP EQVASMASVF VYGMIPVIFA YAVNFPIQKF LQAQSIVTPS
201: AYISAATLVI HLVLSWIAVY RLGFGLLALS LIHSLSWWII VAAQIVYIKM SPRCQRTWEG FSWKAFEGLW DFFRLSAASA VMLCLESWYS QILVLLAGLL
301: KNPELALDSL AICMSISAIS FMVSVGFNAA ASVRVSNELG AGNPRAAAFS TFVTTGVSLL LAVFEAVVVM SWRNVISYAF TDSPEVAEAV ADLSPFLAIT
401: IVLNGVQPVL SGVAVGCGWQ AFVAYVNIGC YYVVGIPIGF ILGFTYDMGA KGIWTGMIGG TLMQTIILVI VTFRTDWDKE VEKASSRLDQ WEESREPLLK
501: Q

Best Arabidopsis Sequence Match ( AT1G61890.1 )
(BLAST)

001: MNSESLENLH RPLIESSKSF VDYRLETVLT DRELPYFRRI YLAMMIEMKF LFHLAAPAIF VYVINNGMSI LTRIFAGHVG SFELAAASLG NSGFNMFTYG
101: LLLGMGSAVE TLCGQAHGAH RYEMLGVYLQ RSTVVLILTC LPMSFLFLFS NPILTALGEP EQVATLASVF VYGMIPVIFA YAVNFPIQKF LQSQSIVTPS
201: AYISAATLVI HLILSWIAVY RLGYGLLALS LIHSFSWWII VVAQIVYIKM SPRCRRTWEG FSWKAFEGLW DFFRLSAASA VMLCLESWYS QILVLLAGLL
301: KNPELALDSL AICMSISAIS FMVSVGFNAA ASVRVSNELG AGNPRAAAFS TVVTTGVSFL LSVFEAIVVL SWRHVISYAF TDSPAVAEAV ADLSPFLAIT
401: IVLNGIQPVL SGVAVGCGWQ AFVAYVNIGC YYVVGIPVGF VLGFTYDMGA KGIWTGMIGG TLMQTIILVI VTLRTDWDKE VEKASSRLDQ WEESREPLLK
501: Q

Arabidopsis Description

DTX37Protein DETOXIFICATION 37 [Source:UniProtKB/Swiss-Prot;Acc:O80695]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.