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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 3
  • cytosol 1
  • plasma membrane 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 90.53 95.79
VIT_10s0116g01880.t01 Wine grape plasma membrane 73.11 75.83
VIT_10s0116g01870.t01 Wine grape plastid 71.02 73.53
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 65.53 71.49
KRH11419 Soybean plasma membrane 67.23 70.3
CDY07257 Canola endoplasmic reticulum, vacuole 42.05 67.89
PGSC0003DMT400032971 Potato cytosol, peroxisome, plasma membrane 63.83 67.4
Bra027073.1-P Field mustard cytosol, plasma membrane, vacuole 63.07 66.47
CDY19507 Canola cytosol, plasma membrane, vacuole 63.07 66.47
AT1G11670.1 Thale cress cytosol, peroxisome, plasma membrane 63.26 66.4
CDY12916 Canola cytosol, plasma membrane, vacuole 62.88 66.27
PGSC0003DMT400042438 Potato cytosol, peroxisome, plasma membrane 63.83 66.21
AT1G61890.1 Thale cress plasma membrane 62.5 65.87
Bra031776.1-P Field mustard plasma membrane 61.17 65.52
CDY64933 Canola plasma membrane 62.31 65.15
CDY25329 Canola plasma membrane 61.17 64.47
CDY47166 Canola plasma membrane 60.98 64.27
Bra028379.1-P Field mustard plasma membrane 60.98 64.27
CDY34833 Canola plasma membrane 55.49 63.83
CDY34637 Canola plasma membrane 55.49 63.83
PGSC0003DMT400022543 Potato plasma membrane 63.07 63.55
Bra038747.1-P Field mustard plasma membrane 42.42 61.54
Bra020862.1-P Field mustard plasma membrane 58.33 61.35
CDX98712 Canola plasma membrane 58.9 61.34
Bra038748.1-P Field mustard cytosol, peroxisome, plasma membrane 57.01 61.18
CDX79109 Canola plasma membrane 57.58 61.17
CDY27434 Canola plasma membrane 58.14 61.16
CDX76391 Canola plasma membrane 58.14 61.16
CDX94063 Canola plasma membrane 58.71 61.14
Bra016823.1-P Field mustard plasma membrane 36.55 61.08
Bra020863.1-P Field mustard plasma membrane 58.14 60.55
CDY27431 Canola plasma membrane 57.77 60.16
CDX94061 Canola peroxisome, plasma membrane, vacuole 57.39 59.76
CDX76392 Canola plasma membrane 51.89 59.44
CDX94064 Canola plasma membrane 46.59 59.42
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 56.82 59.17
CDY64820 Canola plasma membrane 58.33 59.0
CDX98711 Canola peroxisome, plasma membrane, vacuole 56.63 58.97
AT4G21910.4 Thale cress plasma membrane 56.82 58.94
CDX98713 Canola plasma membrane 50.57 58.68
AT4G21903.2 Thale cress plasma membrane 56.63 57.83
PGSC0003DMT400074161 Potato plasma membrane 40.91 45.19
PGSC0003DMT400047906 Potato cytosol, peroxisome, plasma membrane 43.75 44.94
PGSC0003DMT400005437 Potato cytosol, peroxisome, plasma membrane 41.29 43.69
PGSC0003DMT400041642 Potato cytosol, plasma membrane, vacuole 40.53 43.41
PGSC0003DMT400052553 Potato golgi, plasma membrane, vacuole 39.77 41.92
PGSC0003DMT400021339 Potato peroxisome, plasma membrane, vacuole 37.88 41.84
PGSC0003DMT400031221 Potato cytosol, plasma membrane, vacuole 38.26 41.56
PGSC0003DMT400060876 Potato cytosol, peroxisome, plasma membrane 37.69 40.78
PGSC0003DMT400026355 Potato plasma membrane 38.64 40.48
PGSC0003DMT400064838 Potato plasma membrane 36.36 40.34
PGSC0003DMT400076953 Potato plasma membrane 38.64 40.32
PGSC0003DMT400005432 Potato plasma membrane 36.17 40.3
PGSC0003DMT400026353 Potato plasma membrane 37.69 39.56
PGSC0003DMT400072250 Potato plasma membrane 34.47 37.53
PGSC0003DMT400011415 Potato plasma membrane 35.04 36.71
Bra013572.1-P Field mustard golgi 54.73 28.17
Protein Annotations
EntrezGene:102593891MapMan:24.2.4.1.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0016021GO:GO:0055085UniProt:M1BD16InterPro:MATE_famPFAM:PF01554EnsemblPlantsGene:PGSC0003DMG400016458
PGSC:PGSC0003DMG400016458EnsemblPlants:PGSC0003DMT400042439PANTHER:PTHR11206PANTHER:PTHR11206:SF140TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0002960388SEG:seg::::
Description
Multi antimicrobial extrusion family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400016458]
Coordinates
chr2:-:36265373..36270512
Molecular Weight (calculated)
57769.3 Da
IEP (calculated)
6.503
GRAVY (calculated)
0.702
Length
528 amino acids
Sequence
(BLAST)
001: MGKVLESEAE QPLLAAHGAS SELEEVLSDF QLPYFQRLRS AFWIEFQLLF RLAAPAIAVY MINNAMSMST RIFSGQLGNL QLAAASLGNQ GIQLCAYGLM
101: LGMGSAVETL CGQAYGANRY DMLGVYLQRS TIVLSITGIP LAVVYLFSKN ILLALGESKQ VASEAAVFVY GLIPQIFAYA VNFPIQKFLQ SQSIVAPSAY
201: ISLGTLFVHL LLSWIVVYKI GLGLIGASLV LSLSWWIIVA AQFIYILRSE SCKTTWTGFR WEAFSGLWEF VKLSAASAVM LCLETWYFQI LVLLSGLLKN
301: PELALDSISV CMAVNGLMFM VSVGFNAAAS VRVSNELGAA HPKSAAFSVF VVTLISFLIA VVEAIIVLCL RNVISYAFTE GEIVANAVSD LCPFLAVTLI
401: LNGVQPVLSG VAVGCGWQAF VAYVNVGCYY GVGIPLGCLL GFKYDLGAKG IWTGMIGGTI MQTFILIWFT FRADWNKEGI WTGMIGGTVM QTFILIWFTF
501: RADWNKEVEK AKKHLDKWEN VKETLSKE
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.