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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038747.1-P Field mustard plasma membrane 66.15 82.69
CDY27434 Canola plasma membrane 87.91 79.68
CDX76391 Canola plasma membrane 87.69 79.48
CDX79109 Canola plasma membrane 86.15 78.87
CDX98712 Canola plasma membrane 87.03 78.11
CDX94063 Canola plasma membrane 86.15 77.32
CDX94064 Canola plasma membrane 70.11 77.05
CDX94061 Canola peroxisome, plasma membrane, vacuole 83.3 74.75
CDY27431 Canola plasma membrane 83.3 74.75
CDX98711 Canola peroxisome, plasma membrane, vacuole 83.08 74.56
CDX76392 Canola plasma membrane 73.63 72.67
CDY33131 Canola golgi, plasma membrane, vacuole 24.62 63.64
CDY47166 Canola plasma membrane 62.42 56.69
CDY25329 Canola plasma membrane 62.2 56.49
CDY64933 Canola plasma membrane 62.64 56.44
CDY19507 Canola cytosol, plasma membrane, vacuole 61.1 55.49
CDY07257 Canola endoplasmic reticulum, vacuole 39.78 55.35
CDY12916 Canola cytosol, plasma membrane, vacuole 60.88 55.29
CDY34637 Canola plasma membrane 55.6 55.12
CDY34833 Canola plasma membrane 55.38 54.9
VIT_10s0116g01880.t01 Wine grape plasma membrane 61.32 54.81
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 58.9 53.71
VIT_10s0116g01870.t01 Wine grape plastid 59.12 52.75
KRH11419 Soybean plasma membrane 57.36 51.68
CDY33129 Canola cytosol, peroxisome, plasma membrane 56.26 50.69
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 58.68 50.57
CDY38631 Canola cytosol, peroxisome, vacuole 56.26 50.0
CDX92916 Canola cytosol, plasma membrane, vacuole 55.16 49.7
CDY64820 Canola plasma membrane 56.7 49.43
CDY65669 Canola cytosol, peroxisome, plasma membrane 53.41 49.09
CDY39493 Canola cytosol, peroxisome, plasma membrane 54.07 48.91
CDY39494 Canola cytosol, peroxisome, plasma membrane 54.95 48.64
CDY19294 Canola cytosol, peroxisome, plasma membrane 54.73 48.44
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 18.46 45.65
CDY69153 Canola cytosol, peroxisome, plasma membrane 30.11 43.22
CDY33130 Canola cytosol, peroxisome, vacuole 29.01 42.86
CDY24250 Canola cytosol, peroxisome, plasma membrane 29.67 42.59
CDY19295 Canola cytosol, peroxisome, plasma membrane 28.35 42.43
CDX83628 Canola plasma membrane 33.19 38.42
CDY06731 Canola cytosol, peroxisome, plasma membrane 39.78 37.4
CDY01224 Canola plasma membrane 27.69 37.39
CDY17070 Canola cytosol, peroxisome, plasma membrane 39.56 37.19
CDX67772 Canola plasma membrane 41.32 37.08
CDX98344 Canola plasma membrane 41.32 37.08
CDX69834 Canola plasma membrane 38.68 36.97
CDY13643 Canola cytosol, peroxisome, plasma membrane 40.44 36.58
CDY44967 Canola plasma membrane 32.09 36.32
CDX81176 Canola plasma membrane 38.9 36.27
CDX83627 Canola cytosol, peroxisome, plasma membrane 40.0 36.18
CDX78379 Canola peroxisome, plasma membrane, vacuole 36.7 36.15
CDX81172 Canola plasma membrane 38.46 36.08
CDX85764 Canola plasma membrane 39.56 36.0
CDX97005 Canola plasma membrane 38.46 35.93
CDY26602 Canola cytosol, peroxisome, vacuole 40.88 35.84
CDX69835 Canola plasma membrane 38.24 35.73
CDY40093 Canola plasma membrane 39.34 35.66
CDY16041 Canola cytosol, peroxisome, vacuole 40.66 35.65
CDY34598 Canola cytosol, peroxisome, vacuole 40.66 35.65
CDX93794 Canola plasma membrane 38.46 35.5
CDX81281 Canola plasma membrane 37.58 35.33
CDY40095 Canola plasma membrane 37.8 35.32
CDX78378 Canola plasma membrane 37.58 35.26
CDY21076 Canola cytosol, peroxisome, plasma membrane 40.0 35.07
CDX97001 Canola plasma membrane 37.58 34.83
CDX89406 Canola plasma membrane 38.9 34.57
CDX94432 Canola plasma membrane 38.46 34.25
CDY49481 Canola plasma membrane 31.87 33.18
CDY08796 Canola plasma membrane 39.12 32.84
CDY61495 Canola plasma membrane 39.12 32.66
CDY29945 Canola plasma membrane 35.6 32.53
CDX81174 Canola plasma membrane 29.01 32.51
CDY21177 Canola plasma membrane 35.16 32.13
CDY51758 Canola plasma membrane 35.16 32.06
CDY50654 Canola plasma membrane 34.95 31.86
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 38.02 31.86
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 37.8 31.68
CDY54720 Canola plasma membrane 38.02 30.78
CDY33962 Canola plasma membrane 21.1 30.0
CDY08797 Canola plasma membrane 36.48 29.38
CDX92726 Canola nucleus, peroxisome, plasma membrane 38.46 29.26
CDY50190 Canola nucleus, peroxisome, plasma membrane 38.24 28.86
CDY38453 Canola plasma membrane 25.05 28.64
CDY08798 Canola cytosol, peroxisome, plasma membrane 19.78 28.04
CDY16896 Canola plasma membrane 30.55 28.02
CDY14558 Canola plasma membrane 19.78 27.95
CDY70471 Canola cytosol, peroxisome, plasma membrane 18.46 27.72
CDX84047 Canola plasma membrane 35.16 22.73
CDX69836 Canola plasma membrane 38.68 17.15
Protein Annotations
EnsemblPlants:CDX98713EnsemblPlantsGene:GSBRNA2T00106780001GO:A0A078EHA4GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF140PFAM:PF01554ProteinID:CDX98713
ProteinID:CDX98713.1TMHMM:TMhelixUniParc:UPI0004EE9B11MapMan:24.2.4.1.1::
Description
BnaA03g44980D
Coordinates
chrLK031906:-:806556..810030
Molecular Weight (calculated)
49549.9 Da
IEP (calculated)
6.261
GRAVY (calculated)
0.599
Length
455 amino acids
Sequence
(BLAST)
001: MDASNEQTTE RTDLQRPLVD QKPPPSDVGL ESILTENSLP YRRRVYLGAC IELKILLRLA LPAILVYIVN SGMSISARIF AGHIGSHELA AASIGNSCFS
101: LVYGLMLGMG SAVETLCGQA YGAHRYDMLG IYFQRATIVL ALVGLPMTVL YTFSYPILLV LGEPKMVSYM GSLYIVGLMP QIFAYAVNFT AQKFLQAQSV
201: VTPSAYISAA ALFLQISLTW MTVNMMGLGL MGIAYVLTIS WWVIVVAQIL YITSSQRTCS LSLDSLSICM SVSALSFMVS VGFNAAASIR TSNELGAGNP
301: RSALFSTWTA TFISFVISLA EALAVIASRD YISYIFTSDA DVAKAVSDLC PFLAVTIILN GIQPVLSGVA VGCGWQTFVA YVNVGCYYIV GIPVGCILGF
401: TFNFQAKGIW TGMIGGTLMQ TLILLYVTYR TDWDKEVEKA RKRLDMWDDK ESLQN
Best Arabidopsis Sequence Match ( AT4G21903.1 )
(BLAST)
001: MNGSNETVER RIELRRPLVD TEKKLPLEVG LESVLTESSL PYRRRVYLGM CIELKLLLRL ALPAILVYLI NGGMGISARI FAGHLGSTQL AAASIGNSSF
101: SLVYALMLGM GSAVETLCGQ AYGAHRYEML GIYLQRATIV LALVGFPMTI LYTFSYPILL LLGEPKTVSY MGSLYIAGLI PQIFAYAVYF TAQKFLQAQS
201: VVAPSAYISA AALVLQISLT WITVYAMGQG LMGIAYVLTI SWWFIVGAQT FYVITSVRFK DTWTGFSWKS LHGLWSFFKL SAGSAVMICL ELWYTQILVL
301: LAGLLKDPAL SLDSLSICMS ISALSFMVSV GFNAAVSVRT SNELGAGNPK SALFSTWTAT FVSFVISVVE ALVVIASRDN VSYIFTSDAD VAKAVSDLCP
401: FLAVTIILNG IQPVLSGVAV GCGWQTYVAY VNIGCYYIVG IPIGCILGFT FNFQAKGIWT GMIGGTLMQT LILLYVTYQA DWDKEVEKAR KRLDMWDDKE
501: PLQN
Arabidopsis Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F4JKB8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.