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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus, peroxisome, plasma membrane

Predictor Summary:
  • cytosol 1
  • nucleus 1
  • mitochondrion 1
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:nucleus
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50190 Canola nucleus, peroxisome, plasma membrane 96.15 95.36
AT4G25640.2 Thale cress plasma membrane 72.74 84.63
CDX94432 Canola plasma membrane 70.74 82.78
CDX89406 Canola plasma membrane 70.74 82.62
CDY49481 Canola plasma membrane 55.35 75.74
VIT_16s0050g00910.t01 Wine grape plasma membrane 56.86 69.53
PGSC0003DMT400076953 Potato plasma membrane 58.19 68.77
Solyc06g036130.2.1 Tomato plasma membrane 57.69 68.45
KRH35253 Soybean plasma membrane 55.85 67.61
KRG91572 Soybean vacuole 55.69 67.41
PGSC0003DMT400026355 Potato plasma membrane 56.35 66.87
Solyc03g025240.1.1 Tomato plasma membrane 44.48 66.67
VIT_16s0050g00900.t01 Wine grape plasma membrane 54.35 66.46
VIT_16s0050g00930.t01 Wine grape plasma membrane 54.35 65.92
Solyc03g025190.2.1 Tomato plasma membrane 55.69 65.81
Solyc03g025230.2.1 Tomato plasma membrane 54.52 65.2
Solyc03g025200.2.1 Tomato plasma membrane 51.34 64.63
Solyc03g025250.2.1 Tomato plasma membrane 53.34 63.67
GSMUA_Achr7P04510_001 Banana plasma membrane 41.97 63.07
PGSC0003DMT400026353 Potato plasma membrane 52.84 62.82
GSMUA_Achr1P15340_001 Banana plasma membrane 47.99 60.42
GSMUA_AchrUn_... Banana golgi, peroxisome, vacuole 50.5 59.68
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 53.34 58.75
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 53.34 58.75
TraesCS7A01G241600.1 Wheat plasma membrane 46.66 58.25
TraesCS7B01G137200.1 Wheat plasma membrane 46.66 58.25
TraesCS7B01G032100.1 Wheat plasma membrane 46.49 58.04
TraesCS7D01G240600.1 Wheat plasma membrane 46.49 58.04
HORVU6Hr1G091840.1 Barley plasma membrane 48.66 57.97
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 49.33 57.96
TraesCS7D01G130700.1 Wheat plasma membrane 45.99 57.77
TraesCS7D01G469000.1 Wheat plasma membrane 45.82 57.44
TraesCS7A01G482100.1 Wheat plasma membrane 45.99 57.41
TraesCS6A01G400100.1 Wheat plasma membrane 48.66 57.4
TraesCS6B01G440300.1 Wheat plasma membrane 48.33 57.34
TraesCS7A01G131500.2 Wheat plasma membrane 45.48 57.14
TraesCS7B01G032300.1 Wheat plasma membrane 45.48 57.14
TraesCS6D01G384300.1 Wheat plasma membrane 48.33 57.0
TraesCS7D01G130800.1 Wheat plasma membrane 45.32 56.93
TraesCS7A01G131600.1 Wheat plasma membrane 45.15 56.72
OQU85979 Sorghum cytosol, peroxisome, vacuole 47.99 56.61
TraesCS7B01G384300.1 Wheat plasma membrane 45.15 56.6
TraesCS2B01G612900.1 Wheat plasma membrane 45.15 56.25
OQU85978 Sorghum plasma membrane 38.8 55.9
Os08t0562800-01 Rice peroxisome, plasma membrane, vacuole 42.14 55.88
Solyc03g025220.2.1 Tomato plasma membrane 46.15 54.65
TraesCS6B01G440400.1 Wheat cytosol, peroxisome, plasma membrane 50.33 53.85
TraesCS6D01G384400.1 Wheat plastid 50.0 53.68
TraesCS6A01G400200.1 Wheat cytosol, peroxisome, plasma membrane 50.0 53.49
OQU80697 Sorghum cytosol 47.16 53.01
KRH08881 Soybean plasma membrane 41.97 52.62
KRH38402 Soybean plasma membrane 42.14 51.64
HORVU0Hr1G022320.1 Barley plasma membrane 41.3 51.03
CDY06731 Canola cytosol, peroxisome, plasma membrane 41.14 50.83
CDY17070 Canola cytosol, peroxisome, plasma membrane 41.14 50.83
KRH08883 Soybean plasma membrane 41.47 50.82
Os02t0821600-00 Rice plasma membrane 41.47 50.51
KRH38403 Soybean plasma membrane 40.97 50.2
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 15.22 49.46
HORVU7Hr1G049240.3 Barley peroxisome 44.48 48.1
CDY33131 Canola golgi, plasma membrane, vacuole 13.88 47.16
CDX81281 Canola plasma membrane 37.29 46.07
CDX83627 Canola cytosol, peroxisome, plasma membrane 38.63 45.92
CDY13643 Canola cytosol, peroxisome, plasma membrane 38.63 45.92
CDX83628 Canola plasma membrane 30.1 45.8
CDX97005 Canola plasma membrane 36.79 45.17
CDY16041 Canola cytosol, peroxisome, vacuole 39.13 45.09
CDY26602 Canola cytosol, peroxisome, vacuole 39.13 45.09
CDX69835 Canola plasma membrane 36.62 44.97
CDX69834 Canola plasma membrane 35.79 44.96
CDY07257 Canola endoplasmic reticulum, vacuole 24.58 44.95
CDY01224 Canola plasma membrane 25.25 44.81
CDX78379 Canola peroxisome, plasma membrane, vacuole 34.45 44.59
CDY34598 Canola cytosol, peroxisome, vacuole 38.63 44.51
Zm00001d049910_P001 Maize cytosol, peroxisome, plasma membrane 44.15 44.37
CDX81176 Canola plasma membrane 36.12 44.26
CDY44967 Canola plasma membrane 29.6 44.03
CDY21076 Canola cytosol, peroxisome, plasma membrane 38.13 43.93
CDY70471 Canola cytosol, peroxisome, plasma membrane 22.24 43.89
CDX85764 Canola plasma membrane 36.29 43.4
CDY08798 Canola cytosol, peroxisome, plasma membrane 23.24 43.3
CDY14558 Canola plasma membrane 23.24 43.17
CDX78378 Canola plasma membrane 34.95 43.09
CDX81172 Canola plasma membrane 34.95 43.09
CDY40095 Canola plasma membrane 34.95 42.92
CDY40093 Canola plasma membrane 35.95 42.83
CDX93794 Canola plasma membrane 35.12 42.6
CDX97001 Canola plasma membrane 34.95 42.57
CDY33962 Canola plasma membrane 22.74 42.5
Zm00001d051886_P001 Maize cytosol, peroxisome, plasma membrane 49.0 42.34
CDY33129 Canola cytosol, peroxisome, plasma membrane 35.28 41.78
CDX92916 Canola cytosol, plasma membrane, vacuole 35.12 41.58
CDY08796 Canola plasma membrane 37.63 41.51
CDY12916 Canola cytosol, plasma membrane, vacuole 34.62 41.32
CDY47166 Canola plasma membrane 34.62 41.32
CDY34637 Canola plasma membrane 31.61 41.18
CDY19507 Canola cytosol, plasma membrane, vacuole 34.45 41.12
CDY25329 Canola plasma membrane 34.45 41.12
CDY61495 Canola plasma membrane 37.46 41.1
CDY64933 Canola plasma membrane 34.62 40.99
CDY34833 Canola plasma membrane 31.44 40.96
CDY65669 Canola cytosol, peroxisome, plasma membrane 33.78 40.81
CDY39493 Canola cytosol, peroxisome, plasma membrane 34.28 40.76
CDY39494 Canola cytosol, peroxisome, plasma membrane 34.95 40.66
CDY38631 Canola cytosol, peroxisome, vacuole 34.78 40.62
CDY19294 Canola cytosol, peroxisome, plasma membrane 34.62 40.27
CDY54720 Canola plasma membrane 37.46 39.86
CDX94064 Canola plasma membrane 27.59 39.86
CDX81174 Canola plasma membrane 26.92 39.66
CDX79109 Canola plasma membrane 32.78 39.44
CDY24250 Canola cytosol, peroxisome, plasma membrane 20.9 39.43
CDX98711 Canola peroxisome, plasma membrane, vacuole 33.28 39.25
CDY69153 Canola cytosol, peroxisome, plasma membrane 20.74 39.12
CDY08797 Canola plasma membrane 36.96 39.12
CDX94061 Canola peroxisome, plasma membrane, vacuole 33.11 39.05
KRH38401 Soybean plasma membrane 33.78 38.7
CDX98713 Canola plasma membrane 29.26 38.46
CDX76391 Canola plasma membrane 31.94 38.05
CDY27434 Canola plasma membrane 31.94 38.05
CDX94063 Canola plasma membrane 31.94 37.67
CDX98712 Canola plasma membrane 31.94 37.67
CDY64820 Canola plasma membrane 32.61 37.36
CDY33130 Canola cytosol, peroxisome, vacuole 19.06 37.01
CDY19295 Canola cytosol, peroxisome, plasma membrane 18.73 36.84
CDX98344 Canola plasma membrane 31.1 36.69
CDY27431 Canola plasma membrane 31.1 36.69
CDX67772 Canola plasma membrane 30.94 36.49
CDX76392 Canola plasma membrane 27.76 36.01
CDY38453 Canola plasma membrane 23.91 35.93
CDY51758 Canola plasma membrane 29.1 34.87
CDY21177 Canola plasma membrane 28.76 34.54
CDY50654 Canola plasma membrane 28.6 34.27
CDY29945 Canola plasma membrane 28.43 34.14
CDY16896 Canola plasma membrane 27.09 32.66
CDX84047 Canola plasma membrane 33.28 28.27
CDX69836 Canola plasma membrane 36.29 21.15
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078DTW9EnsemblPlants:CDX92726ProteinID:CDX92726ProteinID:CDX92726.1ncoils:Coil
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00154546001InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF184TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EDFBF2
SEG:seg:::::
Description
BnaC07g39840D
Coordinates
chrLK031873:-:521547..526186
Molecular Weight (calculated)
65716.3 Da
IEP (calculated)
7.699
GRAVY (calculated)
0.488
Length
598 amino acids
Sequence
(BLAST)
001: MDHCVCKQVQ SVASKLKKKK AHGKDEFDRV KQAEKKKRRL EKALATSAAI RAELEKKKQK KLEEQQRLDE EGAAIAEAVA LHVLLGEDSD GDDSSRVMLG
101: EEKGFKMDIL FEEEMDPTTP FLGNEVKEDY SPARTLSEVK RVFSMESAKL WKIAAPIGFN IICQYGVTSF TNIFVGHIGE IELSAVSISL SVIGTFSFGF
201: LLGMGSALET LCGQAFGAGQ VHMLGVYMQR SWIILSVSCI FLLPIYIFAT PVLRLLGQAE EIAVAAGEFT LLTIPQLFSM AFTFPTSKFL QAQSKVIAIA
301: WIGFVALIMH VAMLWLFIVV FGWGTNGAAL AFSITNWGTA ISQIVYVIGW CNEGWTGLTW LAFKEIWAFV RLSIASAVML CLELWYMMSI IVLTGRLDNA
401: VIAVDSLSIC MNVNGVEAML FIGINAAISV RVSNELGLGR PRAAKYSVYV TVFQSLLIGL VFMVAIIIAR DHFAIIFTSS EVLKRAVSKL AYLLGITMVL
501: NSVQPVISGV AIGGGWQGLV AYINLGCYYI FGLPFGYLLG YKANLGVMGL WGGMIAGTTL QTLLLIVVVY KTNWNKEVEE TMERMKKWGG SETKDLIA
Best Arabidopsis Sequence Match ( AT4G25640.1 )
(BLAST)
001: MDPTAPLLTH GGEVEEDYAP ARSWTDVKRV LSTESAKLWM IAAPVGFNII CQYGVSSVTN IFVGHIGEVE LSAVSISLSV IGTFSFGFLL GMGSALETLC
101: GQAYGAGQVN MLGVYMQRSW IILFVSCFFL LPIYIFATPV LRLLGQAEEI AVPAGQFTLL TIPQLFSLAF NFPTSKFLQA QSKVVAIAWI GFVALSLHVI
201: MLWLFIIEFG WGTNGAALAF NITNWGTAIA QIVYVIGWCN EGWTGLSWLA FKEIWAFVRL SIASAVMLCL EIWYMMSIIV LTGRLDNAVI AVDSLSICMN
301: INGLEAMLFI GINAAISVRV SNELGLGRPR AAKYSVYVTV FQSLLIGLVF MVAIIIARDH FAIIFTSSKV LQRAVSKLAY LLGITMVLNS VQPVVSGVAV
401: GGGWQGLVAY INLGCYYIFG LPFGYLLGYI ANFGVMGLWS GMIAGTALQT LLLLIVLYKT NWNKEVEETM ERMKKWGGSE TTSKDILA
Arabidopsis Description
ATDTX35Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F4JTB2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.