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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98712 Canola plasma membrane 97.04 97.04
CDY27431 Canola plasma membrane 88.95 88.95
CDX76392 Canola plasma membrane 80.08 88.07
CDY27434 Canola plasma membrane 86.98 87.85
CDX76391 Canola plasma membrane 86.39 87.25
CDX98713 Canola plasma membrane 77.32 86.15
CDX79109 Canola plasma membrane 84.22 85.92
AT4G21910.4 Thale cress plasma membrane 85.4 85.07
CDX98711 Canola peroxisome, plasma membrane, vacuole 85.01 85.01
CDX94061 Canola peroxisome, plasma membrane, vacuole 84.81 84.81
CDX94064 Canola plasma membrane 66.27 81.16
AT4G21903.2 Thale cress plasma membrane 81.26 79.69
CDY07257 Canola endoplasmic reticulum, vacuole 41.81 64.83
CDY33131 Canola golgi, plasma membrane, vacuole 22.49 64.77
VIT_10s0116g01880.t01 Wine grape plasma membrane 64.69 64.44
CDY34637 Canola plasma membrane 58.19 64.27
CDY34833 Canola plasma membrane 57.79 63.83
CDY25329 Canola plasma membrane 62.72 63.47
CDY47166 Canola plasma membrane 62.52 63.27
CDY64933 Canola plasma membrane 62.92 63.17
CDY12916 Canola cytosol, plasma membrane, vacuole 62.33 63.07
CDY19507 Canola cytosol, plasma membrane, vacuole 62.33 63.07
VIT_10s0116g01870.t01 Wine grape plastid 62.72 62.35
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 61.34 62.32
KRH11419 Soybean plasma membrane 59.37 59.6
CDY33129 Canola cytosol, peroxisome, plasma membrane 59.37 59.6
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 61.14 58.71
CDY65669 Canola cytosol, peroxisome, plasma membrane 56.8 58.18
CDX92916 Canola cytosol, plasma membrane, vacuole 57.79 58.02
CDY38631 Canola cytosol, peroxisome, vacuole 58.38 57.81
CDY39493 Canola cytosol, peroxisome, plasma membrane 57.2 57.65
CDY39494 Canola cytosol, peroxisome, plasma membrane 58.38 57.59
CDY19294 Canola cytosol, peroxisome, plasma membrane 58.19 57.39
CDY69153 Canola cytosol, peroxisome, plasma membrane 35.31 56.47
CDY64820 Canola plasma membrane 57.79 56.13
CDY33130 Canola cytosol, peroxisome, vacuole 33.92 55.84
CDY24250 Canola cytosol, peroxisome, plasma membrane 34.52 55.2
CDY19295 Canola cytosol, peroxisome, plasma membrane 31.56 52.63
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 16.77 46.2
CDY01224 Canola plasma membrane 29.39 44.21
CDX98344 Canola plasma membrane 43.59 43.59
CDX67772 Canola plasma membrane 43.39 43.39
CDY06731 Canola cytosol, peroxisome, plasma membrane 41.03 42.98
CDY17070 Canola cytosol, peroxisome, plasma membrane 40.83 42.77
CDY44967 Canola plasma membrane 33.73 42.54
CDX97005 Canola plasma membrane 40.63 42.3
CDX83628 Canola plasma membrane 32.74 42.24
CDX69834 Canola plasma membrane 39.65 42.23
CDX78379 Canola peroxisome, plasma membrane, vacuole 38.46 42.21
CDX81281 Canola plasma membrane 39.84 41.74
CDX69835 Canola plasma membrane 40.04 41.68
CDX81176 Canola plasma membrane 40.04 41.6
CDY13643 Canola cytosol, peroxisome, plasma membrane 41.03 41.35
CDX85764 Canola plasma membrane 40.43 41.0
CDX83627 Canola cytosol, peroxisome, plasma membrane 40.63 40.95
CDY40095 Canola plasma membrane 39.05 40.66
CDY40093 Canola plasma membrane 40.24 40.64
CDX81172 Canola plasma membrane 38.86 40.62
CDY34598 Canola cytosol, peroxisome, vacuole 41.42 40.46
CDX93794 Canola plasma membrane 39.25 40.37
CDX97001 Canola plasma membrane 39.05 40.33
CDY26602 Canola cytosol, peroxisome, vacuole 41.22 40.27
CDX78378 Canola plasma membrane 38.46 40.21
CDY16041 Canola cytosol, peroxisome, vacuole 41.03 40.08
CDY21076 Canola cytosol, peroxisome, plasma membrane 40.83 39.88
CDX81174 Canola plasma membrane 30.97 38.67
CDX89406 Canola plasma membrane 38.66 38.28
CDY50654 Canola plasma membrane 37.67 38.28
CDY51758 Canola plasma membrane 37.67 38.28
CDY29945 Canola plasma membrane 37.48 38.15
CDX94432 Canola plasma membrane 38.26 37.96
CDY21177 Canola plasma membrane 37.28 37.95
CDY33962 Canola plasma membrane 23.87 37.81
CDY08798 Canola cytosol, peroxisome, plasma membrane 23.87 37.69
CDY14558 Canola plasma membrane 23.87 37.58
CDY08796 Canola plasma membrane 40.04 37.45
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 40.04 37.38
CDY61495 Canola plasma membrane 40.04 37.25
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 39.84 37.2
CDY38453 Canola plasma membrane 28.6 36.43
CDY49481 Canola plasma membrane 31.36 36.38
CDY70471 Canola cytosol, peroxisome, plasma membrane 21.7 36.3
CDY54720 Canola plasma membrane 40.24 36.3
CDY08797 Canola plasma membrane 37.87 33.98
CDY16896 Canola plasma membrane 32.94 33.67
CDX92726 Canola nucleus, peroxisome, plasma membrane 37.67 31.94
CDY50190 Canola nucleus, peroxisome, plasma membrane 37.67 31.68
CDX84047 Canola plasma membrane 36.88 26.56
CDX69836 Canola plasma membrane 38.66 19.1
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078E3P4EnsemblPlants:CDX94063ProteinID:CDX94063ProteinID:CDX94063.1ncoils:Coil
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00156961001InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF140TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EE6D62
Description
BnaC07g36970D
Coordinates
chrLK031879:-:402686..407080
Molecular Weight (calculated)
55129.2 Da
IEP (calculated)
8.493
GRAVY (calculated)
0.638
Length
507 amino acids
Sequence
(BLAST)
001: MVVPTGTVER TGLQRPLVDP TVSERKPHND VGLESVLTES SLPYLRRVYL GSCIEMKLLF RLALPAILVY LVNSGMSISA RIFAGHLGSQ ELAAASLGNS
101: CFSLVYGLML GMGSAVETLC GQAYGAQRYD MLGIYLQRAT IVLALVGLPM TVLYTFSYPI LLLLGEPKTV SYKGSLYIAG LIPQIFAYAV NFTAQKFLQA
201: QSVVIPSAYI SGAALLLQIL FTWITVYVMG MGLMGIACVL TISWWVIVVA QALYIKNSQR FRHTWTGLSS RSFQGLWSFS KLSVGSAVMI CLEMWYSQIL
301: VLLAGLLKDP ALSLDSLSIC MAVSALSFMV SVGFNAAASI RTSNELGAGN PKSALFSTWT ATFVSFVISV AEAVILLASR DYISYIFTSD ADVAKAVSDL
401: CPFLAVTVIL NGIQPVLSGV AVGCGWQTFV AYVNVGCYYV IGIPIGCVLG FTFNLQAKGI WTGMIGGTLM QTLILLYVTY RTDWDKEVEK ARKRLDMWDD
501: KKNSLQN
Best Arabidopsis Sequence Match ( AT4G21910.2 )
(BLAST)
001: MEVPSETTNL ADLRRPLVVP VVSERKPPAD VGLGLESVLT ERSLPYRRRV YLGACIEMKL LFRLALPAIL VYLVNSGMGI SARIFAGHLG KNELAAASIG
101: NSCFSLVYGL MLGMGSAVET LCGQAYGAHR YEMLGIYLQR ATIVLALVGL PMTLLYTFSY PILILLGEPK TVSYMGSKYI AGLIPQIFAY AVNFTAQKFL
201: QAQSVVAPSA FISAAALILQ ILLTWITVYV MDMGFMGIAY VLTISWWVIV GSQCFYIAVS PKFRHTWTGL SWRSLQGLWS FFKLSAGSAV MICLEMWYSQ
301: ILVLLAGLLE NPARSLDSLS ICMSISALSF MVSVGFNAAV SVRTSNELGA GNPKSAWFST WTATFVSFVI SVTEALAVIW FRDYVSYIFT EDADVAKAVS
401: DLCPFLAITI ILNGIQPVLS GVAVGCGWQT YVAYVNVGCY YVVGIPVGCI LGFTFDFQAK GIWTGMIGGT LMQTLILLYV TYRTDWDKEV EKARKRLDLW
501: DDKKEPLQN
Arabidopsis Description
MATE efflux family protein [Source:TAIR;Acc:AT4G21910]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.