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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • plastid 2
  • golgi 4
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 4
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX97739
CDY30157

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 CDX97739 AT3G16310.1 21798944
AT3G21690.1 CDY30157 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 47.16 45.11
CDY38631 Canola cytosol, peroxisome, vacuole 99.43 34.18
CDY07257 Canola endoplasmic reticulum, vacuole 62.5 33.64
CDX92916 Canola cytosol, plasma membrane, vacuole 95.45 33.27
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 93.75 32.61
CDY39494 Canola cytosol, peroxisome, plasma membrane 93.18 31.91
CDY19294 Canola cytosol, peroxisome, plasma membrane 92.61 31.71
CDY33129 Canola cytosol, peroxisome, plasma membrane 90.91 31.68
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 64.77 30.81
CDY65669 Canola cytosol, peroxisome, plasma membrane 85.8 30.51
CDY39493 Canola cytosol, peroxisome, plasma membrane 85.23 29.82
GSMUA_Achr6P00360_001 Banana vacuole 66.48 28.75
KRH26788 Soybean plasma membrane 76.14 26.59
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 73.86 25.84
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 75.0 25.73
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 76.14 25.72
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 72.73 25.65
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 72.73 25.65
EER91319 Sorghum cytosol, peroxisome, plasma membrane 73.3 25.65
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 71.59 25.61
Os03t0572900-01 Rice plasma membrane 72.73 25.6
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 73.86 25.59
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 73.86 25.54
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 72.16 25.5
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 72.16 25.45
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 71.02 25.41
Os03t0571900-01 Rice plasma membrane 75.0 25.38
CDX94064 Canola plasma membrane 59.66 25.36
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 71.02 25.36
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 71.59 25.35
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 71.59 25.25
Zm00001d033063_P001 Maize vacuole 71.59 25.2
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 73.3 25.2
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 71.02 25.15
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 71.02 25.15
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 71.59 25.15
KRH56125 Soybean plasma membrane 73.86 25.15
GSMUA_Achr9P11610_001 Banana plasma membrane 70.45 25.05
KXG38133 Sorghum cytosol, peroxisome, vacuole 73.3 25.0
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 70.45 25.0
TraesCS3A01G499200.1 Wheat plasma membrane 70.45 24.9
TraesCS3B01G562400.2 Wheat plasma membrane 70.45 24.9
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 74.43 24.81
TraesCS3D01G506100.1 Wheat plasma membrane 69.89 24.7
CDY34833 Canola plasma membrane 64.2 24.62
CDX98713 Canola plasma membrane 63.64 24.62
Solyc12g005850.1.1 Tomato plasma membrane 71.59 24.61
CDY34637 Canola plasma membrane 63.64 24.4
Zm00001d013809_P002 Maize plasma membrane 68.75 24.35
CDY01224 Canola plasma membrane 46.59 24.33
GSMUA_Achr4P23760_001 Banana plasma membrane 63.07 24.13
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 69.32 24.06
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 69.32 24.06
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 69.89 23.98
Zm00001d021629_P003 Maize plasma membrane 69.32 23.78
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 67.05 23.6
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 65.91 23.53
CDX76391 Canola plasma membrane 67.05 23.51
CDY27434 Canola plasma membrane 67.05 23.51
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 68.18 23.39
EER91321 Sorghum plasma membrane 66.48 23.35
TraesCS2B01G247700.2 Wheat plasma membrane 65.34 23.33
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 67.61 23.24
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 65.34 23.19
CDX79109 Canola plasma membrane 65.34 23.14
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 67.05 23.14
VIT_12s0059g02160.t01 Wine grape plasma membrane 67.61 23.11
TraesCS3B01G485100.1 Wheat plasma membrane 72.16 23.05
KXG37120 Sorghum plasma membrane 65.91 22.97
TraesCS2D01G228200.1 Wheat plasma membrane 64.2 22.92
CDX98712 Canola plasma membrane 65.91 22.88
CDY27431 Canola plasma membrane 65.91 22.88
CDY12916 Canola cytosol, plasma membrane, vacuole 64.77 22.75
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 62.5 22.73
TraesCS2A01G222300.1 Wheat plasma membrane 63.64 22.72
CDY19507 Canola cytosol, plasma membrane, vacuole 64.2 22.55
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 64.77 22.53
CDX94063 Canola plasma membrane 64.77 22.49
TraesCS4B01G388800.1 Wheat plasma membrane 63.64 22.44
TraesCS5A01G553200.1 Wheat plasma membrane 63.64 22.44
TraesCSU01G124400.1 Wheat plasma membrane, plastid 63.64 22.4
CDY64933 Canola plasma membrane 64.2 22.38
CDY25329 Canola plasma membrane 63.64 22.36
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 65.34 22.29
CDY47166 Canola plasma membrane 63.07 22.16
CDX98711 Canola peroxisome, plasma membrane, vacuole 63.64 22.09
CDX94061 Canola peroxisome, plasma membrane, vacuole 63.07 21.89
HORVU2Hr1G046420.16 Barley plasma membrane 60.8 21.66
Zm00001d006493_P001 Maize plasma membrane 69.89 21.58
EER93896 Sorghum cytosol, peroxisome, plasma membrane 64.2 21.56
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 61.36 21.01
CDY44967 Canola plasma membrane 46.59 20.4
Zm00001d006494_P004 Maize plasma membrane 65.34 20.28
PGSC0003DMT400022543 Potato plasma membrane 59.09 19.85
CDX83628 Canola plasma membrane 43.75 19.59
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 61.36 18.95
CDX78379 Canola peroxisome, plasma membrane, vacuole 48.86 18.61
CDY06731 Canola cytosol, peroxisome, plasma membrane 51.14 18.59
CDX76392 Canola plasma membrane 48.3 18.44
CDY17070 Canola cytosol, peroxisome, plasma membrane 50.57 18.39
CDX67772 Canola plasma membrane 52.84 18.34
CDX98344 Canola plasma membrane 52.27 18.15
CDY40095 Canola plasma membrane 49.43 17.86
CDX69834 Canola plasma membrane 48.3 17.86
CDX81176 Canola plasma membrane 49.43 17.83
CDX81281 Canola plasma membrane 48.3 17.56
CDY64820 Canola plasma membrane 51.7 17.43
CDX78378 Canola plasma membrane 47.73 17.32
CDX85764 Canola plasma membrane 48.86 17.2
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 52.84 17.13
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 52.84 17.13
CDX69835 Canola plasma membrane 47.16 17.04
CDX97005 Canola plasma membrane 47.16 17.04
CDY40093 Canola plasma membrane 48.3 16.93
CDX81172 Canola plasma membrane 46.59 16.91
CDX97001 Canola plasma membrane 47.16 16.9
CDX93794 Canola plasma membrane 47.16 16.84
CDY21177 Canola plasma membrane 46.59 16.47
CDX83627 Canola cytosol, peroxisome, plasma membrane 46.59 16.3
CDY16041 Canola cytosol, peroxisome, vacuole 47.73 16.18
CDY21076 Canola cytosol, peroxisome, plasma membrane 47.73 16.18
CDY26602 Canola cytosol, peroxisome, vacuole 47.73 16.18
CDY34598 Canola cytosol, peroxisome, vacuole 47.73 16.18
CDY13643 Canola cytosol, peroxisome, plasma membrane 46.02 16.1
CDX89406 Canola plasma membrane 46.59 16.02
CDY29945 Canola plasma membrane 44.89 15.86
CDX94432 Canola plasma membrane 46.02 15.85
CDY50654 Canola plasma membrane 44.89 15.83
CDY51758 Canola plasma membrane 44.89 15.83
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 60.23 15.41
CDY08796 Canola plasma membrane 47.16 15.31
CDX81174 Canola plasma membrane 35.23 15.27
CDY61495 Canola plasma membrane 47.16 15.23
CDY08797 Canola plasma membrane 48.86 15.22
CDY54720 Canola plasma membrane 47.16 14.77
CDX92726 Canola nucleus, peroxisome, plasma membrane 47.16 13.88
CDY50190 Canola nucleus, peroxisome, plasma membrane 47.16 13.76
KRH25385 Soybean plasma membrane 32.39 12.93
CDY49481 Canola plasma membrane 31.25 12.59
CDY16896 Canola plasma membrane 30.68 10.89
CDX84047 Canola plasma membrane 42.05 10.51
CDY38453 Canola plasma membrane 22.16 9.8
CDX69836 Canola plasma membrane 44.89 7.7
CDY08798 Canola cytosol, peroxisome, plasma membrane 5.11 2.8
CDY14558 Canola plasma membrane 5.11 2.8
CDY33962 Canola plasma membrane 4.55 2.5
CDY33130 Canola cytosol, peroxisome, vacuole 1.14 0.65
CDY70471 Canola cytosol, peroxisome, plasma membrane 0.57 0.33
CDY24250 Canola cytosol, peroxisome, plasma membrane 0.57 0.32
CDY69153 Canola cytosol, peroxisome, plasma membrane 0.57 0.32
CDY19295 Canola cytosol, peroxisome, plasma membrane 0.0 0.0
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078H5K5UniProt:A0A078H5K5EnsemblPlants:CDY33131ProteinID:CDY33131ProteinID:CDY33131.1
ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00053822001InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF200TMHMM:TMhelix
UniParc:UPI0004EE1C0F:::::
Description
BnaCnng07020DBnaCnng07020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5K5]
Coordinates
chrLK032307:+:49262..51789
Molecular Weight (calculated)
18890.4 Da
IEP (calculated)
8.192
GRAVY (calculated)
0.766
Length
176 amino acids
Sequence
(BLAST)
001: MTISGWVFMI SVGFNAAISV RVSNELGAGN PKSAAFSVII VNIYSLITSV ILAIVILACR DFLSYAFTEG KKVSAAVSDL CPLLALTLVL NGIQPVLSGV
101: AVGCGWQAFV AKVNVGCYYI VGIPLGGIWT GMICGTLIQT VILAWVTFRT DWTKEVEEAS KRLDKWSNKK LEVVPE
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.