Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G499200.1 | Wheat | plasma membrane | 99.2 | 99.2 |
| TraesCS3D01G506100.1 | Wheat | plasma membrane | 98.8 | 98.8 |
| TraesCS3B01G562500.1 | Wheat | cytosol, plasma membrane, vacuole | 84.94 | 85.98 |
| Zm00001d033061_P002 | Maize | cytosol, plasma membrane, vacuole | 81.33 | 82.15 |
| EER91319 | Sorghum | cytosol, peroxisome, plasma membrane | 82.53 | 81.71 |
| TraesCS3B01G563400.4 | Wheat | cytosol, peroxisome, plasma membrane | 81.53 | 81.36 |
| Os03t0572900-01 | Rice | plasma membrane | 81.53 | 81.2 |
| GSMUA_Achr6P00360_001 | Banana | vacuole | 66.27 | 81.08 |
| Zm00001d013809_P002 | Maize | plasma membrane | 80.72 | 80.89 |
| TraesCS3B01G563700.1 | Wheat | cytosol, peroxisome, plasma membrane | 80.32 | 80.48 |
| Zm00001d033063_P001 | Maize | vacuole | 80.72 | 80.4 |
| TraesCS3B01G563100.2 | Wheat | cytosol, peroxisome, plasma membrane | 80.72 | 80.24 |
| TraesCS3B01G563200.2 | Wheat | cytosol, peroxisome, plasma membrane | 80.12 | 79.96 |
| TraesCS3B01G563500.1 | Wheat | cytosol, peroxisome, plasma membrane | 79.52 | 79.36 |
| GSMUA_Achr2P14000_001 | Banana | peroxisome, plasma membrane, vacuole | 75.7 | 72.36 |
| TraesCS5B01G326600.1 | Wheat | cytosol, peroxisome, plasma membrane | 73.29 | 71.29 |
| CDY33131 | Canola | golgi, plasma membrane, vacuole | 24.9 | 70.45 |
| PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 67.87 | 69.83 |
| KRH26788 | Soybean | plasma membrane | 70.48 | 69.64 |
| Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 70.28 | 69.58 |
| Bra001840.1-P | Field mustard | plasma membrane | 63.65 | 69.37 |
| AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 70.08 | 68.97 |
| Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 69.88 | 68.91 |
| CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 43.78 | 68.77 |
| CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 69.68 | 68.71 |
| GSMUA_Achr4P23760_001 | Banana | plasma membrane | 63.45 | 68.7 |
| CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 43.57 | 68.45 |
| TraesCS4B01G388800.1 | Wheat | plasma membrane | 68.47 | 68.34 |
| VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 69.48 | 68.24 |
| TraesCS2B01G247700.2 | Wheat | plasma membrane | 67.47 | 68.15 |
| CDX92916 | Canola | cytosol, plasma membrane, vacuole | 69.08 | 68.12 |
| Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 67.87 | 67.74 |
| VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 68.67 | 67.46 |
| TraesCS1B01G037000.1 | Wheat | cytosol, peroxisome, vacuole | 69.48 | 67.45 |
| Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.66 | 67.15 |
| CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 66.67 | 67.07 |
| CDY38631 | Canola | cytosol, peroxisome, vacuole | 68.88 | 66.99 |
| CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 67.47 | 66.8 |
| CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 68.88 | 66.73 |
| KRH56125 | Soybean | plasma membrane | 69.28 | 66.73 |
| Solyc12g005850.1.1 | Tomato | plasma membrane | 68.47 | 66.6 |
| CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 68.47 | 66.34 |
| CDY33130 | Canola | cytosol, peroxisome, vacuole | 40.56 | 65.58 |
| Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 65.26 | 65.0 |
| VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 66.87 | 64.66 |
| CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 39.16 | 64.14 |
| TraesCS3B01G485100.1 | Wheat | plasma membrane | 68.67 | 62.07 |
| KRH25385 | Soybean | plasma membrane | 54.82 | 61.9 |
| PGSC0003DMT400022543 | Potato | plasma membrane | 63.86 | 60.69 |
| VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 66.47 | 48.11 |
| TraesCS7B01G137200.1 | Wheat | plasma membrane | 43.78 | 45.51 |
| TraesCS7B01G032100.1 | Wheat | plasma membrane | 43.57 | 45.3 |
| TraesCS4B01G304300.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.78 | 45.05 |
| TraesCS5B01G355700.1 | Wheat | peroxisome, plasma membrane, vacuole | 45.38 | 44.93 |
| TraesCS4B01G070000.1 | Wheat | plasma membrane | 42.37 | 44.8 |
| TraesCS5B01G033600.1 | Wheat | plasma membrane | 44.98 | 44.71 |
| TraesCS7B01G384300.1 | Wheat | plasma membrane | 42.57 | 44.44 |
| TraesCS3B01G336100.1 | Wheat | golgi, nucleus, plasma membrane | 42.17 | 44.12 |
| TraesCS2B01G612900.1 | Wheat | plasma membrane | 42.17 | 43.75 |
| TraesCS7B01G032300.1 | Wheat | plasma membrane | 41.77 | 43.7 |
| TraesCS5B01G245500.1 | Wheat | plasma membrane | 41.77 | 43.61 |
| TraesCS4B01G070100.1 | Wheat | plasma membrane | 41.16 | 43.34 |
| TraesCS7B01G030600.1 | Wheat | plasma membrane | 42.37 | 43.24 |
| TraesCS5B01G245400.1 | Wheat | plasma membrane | 40.56 | 42.89 |
| TraesCS5B01G350400.1 | Wheat | cytosol, plasma membrane, vacuole | 41.97 | 42.48 |
| TraesCS7B01G170800.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.37 | 41.95 |
| TraesCS5B01G350500.1 | Wheat | plasma membrane | 40.96 | 41.21 |
| TraesCS4B01G128600.1 | Wheat | plasma membrane | 41.16 | 41.08 |
| TraesCS6B01G440300.1 | Wheat | plasma membrane | 40.56 | 40.08 |
| TraesCS3B01G039300.1 | Wheat | plasma membrane | 39.96 | 40.04 |
| TraesCS6B01G440400.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.97 | 37.39 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G562400.2 | EnsemblPlantsGene:TraesCS3B01G562400 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:MATE_fam | ncoils:Coil | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF200 | PFAM:PF01554 | SEG:seg |
| TIGR:cd13132 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | MapMan:24.2.4.1.1 | : | : |
Description
No Description!
Coordinates
chr3B:+:795567974..795571973
Molecular Weight (calculated)
53657.6 Da
IEP (calculated)
5.387
GRAVY (calculated)
0.788
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGGDEHGAS ARLESILTDS SAPRAERMWA AGAIELGMLL RLAVPAVIMY MINFLMSMST QIFSGHLGSL ELAAASLGNT GVQMFAYGLM LGMGSAVETL
101: CGQAYGGHKY DMLGTYLQRS AVILCCTGIP LAVIYAFSEP LLLLLGQSPE IARAASIFVY GLIPQIFAYA INFPIQKFLQ AQSIVLPSAY ISTAALVLHL
201: LLSWVVVYKV GLGLLGASLV LSLSWWVIVV AQFAYIIMSP MCRRTWTGFT IKAFSGLPEF LKLSAASAVM LCLETWYYQV MVLIAGLLPN PELSLDSLSV
301: CLTISAWVFM ISIGFNAAAS VRVSNELGAG NPKSAFFSVW VVTVLSAIIA VVLAVVIMCF RNYISYIFTE GERVSDAVAD LCPLLAITII LNGIQPVLSE
401: ISGVAVGCGW QQFVAYVNVG CYYIVGVPLG VLLGFVFNFG VKGLWGGMIG GTAMQTAILL WVTIRTDWSK EVEEAQKRLN KWDDTKKEPL LVGVTDDN
101: CGQAYGGHKY DMLGTYLQRS AVILCCTGIP LAVIYAFSEP LLLLLGQSPE IARAASIFVY GLIPQIFAYA INFPIQKFLQ AQSIVLPSAY ISTAALVLHL
201: LLSWVVVYKV GLGLLGASLV LSLSWWVIVV AQFAYIIMSP MCRRTWTGFT IKAFSGLPEF LKLSAASAVM LCLETWYYQV MVLIAGLLPN PELSLDSLSV
301: CLTISAWVFM ISIGFNAAAS VRVSNELGAG NPKSAFFSVW VVTVLSAIIA VVLAVVIMCF RNYISYIFTE GERVSDAVAD LCPLLAITII LNGIQPVLSE
401: ISGVAVGCGW QQFVAYVNVG CYYIVGVPLG VLLGFVFNFG VKGLWGGMIG GTAMQTAILL WVTIRTDWSK EVEEAQKRLN KWDDTKKEPL LVGVTDDN
001: MDVSNETVER TDLRTPLVDP ADTEVKPLPE VGLESVLTES SLSYRRRVYL GACIELKVLF RLALPAILIY LVNSGMGISA RVFAGHVGSQ ELAAASIGNS
101: CFNLVYGLML GMGSAVETLC GQAYGAHRYE MLGIYLQRAT IVLALVGLPM TLLYTFSYPI LILLGEPKTV SYMGSKYIAG LIPQIFAYAV NFTAQKFLQA
201: QSVVAPSAFI SAAALILQIL LTWITVYVMD MGFMGIAYVL TISWWVIVGS QCFYIAVSPK FRHTWTGLSW RSLQGLWSFF KLSAGSAVMI CLEMWYSQIL
301: VLLAGLLENP ARSLDSLSIC MSISALSFMV SVGFNAAVSV RTSNELGAGN PKSAWFSTWT ATFVSFVISV TEALAVIWFR DYVSYIFTED ADVAKAVSDL
401: CPFLAITIIL NGIQPVLSGV AVGCGWQTYV AYVNVGCYYV VGIPVGCILG FTFDFQAKGI WTGMIGGTLM QTLILLYVTY RTDWDKEVEK ARKRLDLWDD
501: KKEPLQN
101: CFNLVYGLML GMGSAVETLC GQAYGAHRYE MLGIYLQRAT IVLALVGLPM TLLYTFSYPI LILLGEPKTV SYMGSKYIAG LIPQIFAYAV NFTAQKFLQA
201: QSVVAPSAFI SAAALILQIL LTWITVYVMD MGFMGIAYVL TISWWVIVGS QCFYIAVSPK FRHTWTGLSW RSLQGLWSFF KLSAGSAVMI CLEMWYSQIL
301: VLLAGLLENP ARSLDSLSIC MSISALSFMV SVGFNAAVSV RTSNELGAGN PKSAWFSTWT ATFVSFVISV TEALAVIWFR DYVSYIFTED ADVAKAVSDL
401: CPFLAITIIL NGIQPVLSGV AVGCGWQTYV AYVNVGCYYV VGIPVGCILG FTFDFQAKGI WTGMIGGTLM QTLILLYVTY RTDWDKEVEK ARKRLDLWDD
501: KKEPLQN
Arabidopsis Description
MATE efflux family protein [Source:TAIR;Acc:AT4G21910]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.