Skip to main content
crop-pal logo
Banana
Search for another protein from :
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr4P08270_001
GSMUA_Achr4P15460_001
GSMUA_Achr6P14800_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 GSMUA_Achr4P08270_001 AT3G16310.1 21798944
AT3G21690.1 GSMUA_Achr4P15460_001 AT3G16310.1 21798944
AT3G21690.1 GSMUA_Achr6P14800_001 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P00360_001 Banana vacuole 70.43 79.61
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 78.48 69.29
GSMUA_Achr9P11610_001 Banana plasma membrane 70.22 65.25
EER91319 Sorghum cytosol, peroxisome, plasma membrane 70.87 64.81
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 68.91 64.3
KRH26788 Soybean plasma membrane 70.43 64.29
TraesCS3D01G506100.1 Wheat plasma membrane 69.35 64.06
Zm00001d033063_P001 Maize vacuole 69.57 64.0
Zm00001d013809_P002 Maize plasma membrane 69.13 63.98
TraesCS3A01G499200.1 Wheat plasma membrane 68.7 63.45
TraesCS3B01G562400.2 Wheat plasma membrane 68.7 63.45
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 67.61 63.21
CDY33131 Canola golgi, plasma membrane, vacuole 24.13 63.07
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 67.39 63.01
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 68.26 62.93
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 67.83 62.9
Os03t0572900-01 Rice plasma membrane 68.26 62.8
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 67.83 62.78
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 67.83 62.53
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 68.04 62.48
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 67.39 62.37
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 68.48 62.25
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 67.39 62.25
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 67.17 61.92
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 67.17 61.92
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 67.61 61.83
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 66.74 61.77
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 68.04 61.74
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 68.04 61.74
KRH56125 Soybean plasma membrane 69.35 61.7
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 66.74 61.52
Bra001840.1-P Field mustard plasma membrane 61.09 61.49
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 63.91 60.74
CDY38631 Canola cytosol, peroxisome, vacuole 67.61 60.74
Solyc12g005850.1.1 Tomato plasma membrane 67.61 60.74
CDX92916 Canola cytosol, plasma membrane, vacuole 66.52 60.59
CDY69153 Canola cytosol, peroxisome, plasma membrane 41.74 60.57
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 66.3 60.4
CDY24250 Canola cytosol, peroxisome, plasma membrane 41.52 60.25
CDY33129 Canola cytosol, peroxisome, plasma membrane 66.09 60.2
VIT_12s0059g02160.t01 Wine grape plasma membrane 67.39 60.19
CDY33130 Canola cytosol, peroxisome, vacuole 40.22 60.06
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 63.48 59.96
CDY39494 Canola cytosol, peroxisome, plasma membrane 66.96 59.92
CDY19294 Canola cytosol, peroxisome, plasma membrane 66.52 59.53
CDY39493 Canola cytosol, peroxisome, plasma membrane 65.0 59.44
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 66.52 59.3
CDY65669 Canola cytosol, peroxisome, plasma membrane 63.7 59.19
CDY19295 Canola cytosol, peroxisome, plasma membrane 38.26 57.89
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 62.17 57.2
PGSC0003DMT400022543 Potato plasma membrane 63.7 55.92
KRH25385 Soybean plasma membrane 53.04 55.33
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 64.57 43.17
GSMUA_Achr7P11770_001 Banana plasma membrane 40.0 42.89
GSMUA_Achr7P12820_001 Banana cytosol 39.78 42.26
GSMUA_Achr3P21260_001 Banana plasma membrane 41.74 41.74
GSMUA_Achr7P04510_001 Banana plasma membrane 35.87 41.46
GSMUA_Achr4P22990_001 Banana plasma membrane 45.22 41.35
GSMUA_Achr9P26370_001 Banana plasma membrane 41.52 40.99
GSMUA_Achr8P03000_001 Banana plasma membrane 44.35 40.96
GSMUA_Achr10P... Banana cytosol, peroxisome, plasma membrane 42.39 40.54
GSMUA_Achr8P18130_001 Banana mitochondrion, plasma membrane, vacuole 42.83 40.37
GSMUA_Achr5P01870_001 Banana plasma membrane 40.65 39.62
GSMUA_Achr7P21610_001 Banana plasma membrane 41.74 39.59
GSMUA_Achr6P04190_001 Banana plasma membrane 37.17 39.58
GSMUA_Achr1P15340_001 Banana plasma membrane 40.87 39.58
GSMUA_Achr2P03560_001 Banana cytosol, peroxisome, plasma membrane 41.96 38.6
GSMUA_Achr4P05060_001 Banana peroxisome 42.39 38.09
GSMUA_AchrUn_... Banana golgi, peroxisome, vacuole 41.3 37.55
Protein Annotations
MapMan:24.2.4.1.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr4G23760_001EnsemblPlants:GSMUA_Achr4P23760_001EnsemblPlants:GSMUA_Achr4T23760_001UniProt:M0SRI7InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF200TMHMM:TMhelixUniParc:UPI000295FEADSEG:seg
Description
Putative Protein TRANSPARENT TESTA 12 [Source:GMGC_GENE;Acc:GSMUA_Achr4G23760_001]
Coordinates
chr4:+:23760219..23762765
Molecular Weight (calculated)
48649.2 Da
IEP (calculated)
7.059
GRAVY (calculated)
0.729
Length
460 amino acids
Sequence
(BLAST)
001: MGSSAPREEL SSPLIFPAHD DGHGLPLQAS TPLPPVAADG TAHGTSGKLE SILNDTSIPW LRRVGLASLI EMRLLLSLAA PAIIVYLINF VMSMSTQIFS
101: GHLGNVELAA ASLGNTGIQI FAYGIMLGMG SAVETLCGQA YGAHKYEMLG VYLQRSTVLL MATGVPLAVI YALSRPILVL LGESRDIARA ASVFVYGLIP
201: QIFAYAANFP IQKFLQAQSI VAPSAYISAA TLVVHLLLTW VVVYKVGLGL LGASLFFRLT TASAVMLCLE TWYYQILVLI TGLLKDPALA LDSLSVCMGI
301: NTGIFMISVG FNAAASVRVS NELGAGNPKS AAFSVVVVTA VSFATVARAV SDLCPLLAAS IVLNGIQPVL SGVAVGCGWQ AFVAYVNVGC YYIVGVPAGC
401: LLGFKFGLGV KGIWCGLIAG TVNQTLILLV VTFRTDWNKE VEEAKKRLDK WEEKEEPLLS
Best Arabidopsis Sequence Match ( AT3G21690.1 )
(BLAST)
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.