Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- golgi 1
- peroxisome 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G21690.1 | KRH09922 | AT3G16310.1 | 21798944 |
AT3G21690.1 | KRH23409 | AT3G16310.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
GSMUA_Achr6P00360_001 | Banana | vacuole | 65.87 | 81.57 |
KRH56125 | Soybean | plasma membrane | 83.13 | 81.04 |
PGSC0003DMT400065544 | Potato | cytosol, peroxisome, plasma membrane | 74.4 | 77.48 |
Solyc07g052380.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 76.98 | 77.14 |
Bra001840.1-P | Field mustard | plasma membrane | 69.05 | 76.15 |
CDY33131 | Canola | golgi, plasma membrane, vacuole | 26.59 | 76.14 |
AT3G21690.1 | Thale cress | cytosol, peroxisome, plasma membrane | 76.39 | 76.09 |
Solyc12g005850.1.1 | Tomato | plasma membrane | 76.79 | 75.59 |
CDY24250 | Canola | cytosol, peroxisome, plasma membrane | 47.42 | 75.39 |
CDY69153 | Canola | cytosol, peroxisome, plasma membrane | 47.42 | 75.39 |
VIT_12s0059g02180.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 75.6 | 75.15 |
VIT_12s0059g02220.t01 | Wine grape | cytosol, peroxisome, plasma membrane, plastid | 75.6 | 75.15 |
CDX92916 | Canola | cytosol, plasma membrane, vacuole | 74.8 | 74.65 |
Bra031297.1-P | Field mustard | cytosol, peroxisome, vacuole | 73.81 | 74.55 |
Bra023866.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 71.63 | 74.13 |
KRH25385 | Soybean | plasma membrane | 64.68 | 73.92 |
Bra031296.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 74.01 | 73.86 |
CDY39494 | Canola | cytosol, peroxisome, plasma membrane | 75.2 | 73.74 |
GSMUA_Achr2P14000_001 | Banana | peroxisome, plasma membrane, vacuole | 76.19 | 73.7 |
CDY33130 | Canola | cytosol, peroxisome, vacuole | 45.04 | 73.7 |
CDY38631 | Canola | cytosol, peroxisome, vacuole | 74.8 | 73.63 |
CDY33129 | Canola | cytosol, peroxisome, plasma membrane | 73.61 | 73.47 |
CDY19294 | Canola | cytosol, peroxisome, plasma membrane | 74.4 | 72.96 |
TraesCS3B01G562500.1 | Wheat | cytosol, plasma membrane, vacuole | 71.03 | 72.76 |
CDY65669 | Canola | cytosol, peroxisome, plasma membrane | 71.43 | 72.73 |
CDY39493 | Canola | cytosol, peroxisome, plasma membrane | 72.42 | 72.56 |
Os03t0572900-01 | Rice | plasma membrane | 71.83 | 72.4 |
TraesCS3D01G506200.1 | Wheat | cytosol, plasma membrane, vacuole | 70.63 | 72.36 |
TraesCS3A01G499300.1 | Wheat | cytosol, peroxisome, plasma membrane | 71.23 | 72.23 |
EER91319 | Sorghum | cytosol, peroxisome, plasma membrane | 72.02 | 72.17 |
VIT_12s0059g02160.t01 | Wine grape | plasma membrane | 73.61 | 72.04 |
Zm00001d033061_P002 | Maize | cytosol, plasma membrane, vacuole | 70.24 | 71.81 |
TraesCS3D01G506700.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.83 | 71.69 |
Zm00001d013809_P002 | Maize | plasma membrane | 70.63 | 71.63 |
TraesCS3A01G499800.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.44 | 71.57 |
TraesCS5D01G332300.1 | Wheat | cytosol, peroxisome, plasma membrane | 72.22 | 71.51 |
KXG38133 | Sorghum | cytosol, peroxisome, vacuole | 73.21 | 71.51 |
Bra023867.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 70.83 | 71.4 |
TraesCS3B01G563700.1 | Wheat | cytosol, peroxisome, plasma membrane | 70.24 | 71.23 |
Zm00001d033063_P001 | Maize | vacuole | 70.63 | 71.2 |
TraesCS5B01G326600.1 | Wheat | cytosol, peroxisome, plasma membrane | 72.22 | 71.09 |
TraesCS3D01G506100.1 | Wheat | plasma membrane | 70.04 | 70.88 |
Os03t0571900-01 | Rice | plasma membrane | 73.02 | 70.77 |
Zm00001d033062_P001 | Maize | cytosol, plasma membrane, plastid | 72.02 | 70.76 |
TraesCS3D01G506500.3 | Wheat | cytosol, peroxisome, plasma membrane | 70.04 | 70.74 |
TraesCS3A01G499200.1 | Wheat | plasma membrane | 69.84 | 70.68 |
HORVU5Hr1G082890.5 | Barley | cytosol, peroxisome, plasma membrane | 71.23 | 70.67 |
TraesCS3A01G500000.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.64 | 70.62 |
TraesCS3B01G563500.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.84 | 70.54 |
GSMUA_Achr9P11610_001 | Banana | plasma membrane | 69.25 | 70.51 |
TraesCS3B01G562400.2 | Wheat | plasma membrane | 69.64 | 70.48 |
GSMUA_Achr4P23760_001 | Banana | plasma membrane | 64.29 | 70.43 |
CDY19295 | Canola | cytosol, peroxisome, plasma membrane | 42.46 | 70.39 |
TraesCS3B01G563400.4 | Wheat | cytosol, peroxisome, plasma membrane | 69.64 | 70.34 |
EER91321 | Sorghum | plasma membrane | 69.64 | 70.06 |
Os03t0570800-01 | Rice | cytosol, peroxisome, plasma membrane | 69.44 | 70.0 |
TraesCS3B01G563200.2 | Wheat | cytosol, peroxisome, plasma membrane | 69.25 | 69.94 |
TraesCS3B01G563100.2 | Wheat | cytosol, peroxisome, plasma membrane | 69.25 | 69.66 |
TraesCSU01G124400.1 | Wheat | plasma membrane, plastid | 68.85 | 69.4 |
Zm00001d021629_P003 | Maize | plasma membrane | 70.63 | 69.4 |
TraesCS4B01G388800.1 | Wheat | plasma membrane | 68.45 | 69.14 |
KXG37120 | Sorghum | plasma membrane | 69.25 | 69.11 |
TraesCS5A01G553200.1 | Wheat | plasma membrane | 68.25 | 68.94 |
PGSC0003DMT400022543 | Potato | plasma membrane | 71.63 | 68.89 |
Zm00001d013810_P001 | Maize | cytosol, mitochondrion, peroxisome, plasma membrane | 71.43 | 68.18 |
TraesCS1A01G029900.1 | Wheat | cytosol, peroxisome, plasma membrane | 69.05 | 67.84 |
KRH11419 | Soybean | plasma membrane | 67.66 | 67.52 |
TraesCS2B01G247700.2 | Wheat | plasma membrane | 65.87 | 67.34 |
TraesCS1B01G037000.1 | Wheat | cytosol, peroxisome, vacuole | 68.45 | 67.25 |
Zm00001d013811_P001 | Maize | cytosol, peroxisome, plasma membrane | 67.46 | 67.19 |
TraesCS1D01G030400.1 | Wheat | cytosol, peroxisome, plasma membrane | 68.25 | 67.19 |
TraesCS2A01G222300.1 | Wheat | plasma membrane | 65.48 | 66.94 |
TraesCS2D01G228200.1 | Wheat | plasma membrane | 65.48 | 66.94 |
HORVU1Hr1G007910.1 | Barley | peroxisome, plasma membrane | 67.86 | 66.54 |
HORVU3Hr1G110460.3 | Barley | cytosol, peroxisome | 68.06 | 66.47 |
EER93896 | Sorghum | cytosol, peroxisome, plasma membrane | 68.85 | 66.22 |
Os03t0571700-01 | Rice | golgi, peroxisome, plasma membrane | 48.61 | 66.22 |
EER97294 | Sorghum | endoplasmic reticulum, peroxisome, plasma membrane | 64.48 | 65.52 |
HORVU2Hr1G046420.16 | Barley | plasma membrane | 63.49 | 64.78 |
Os07t0516600-01 | Rice | endoplasmic reticulum, peroxisome, plasma membrane | 61.9 | 63.29 |
Zm00001d006493_P001 | Maize | plasma membrane | 71.43 | 63.16 |
TraesCS3B01G485100.1 | Wheat | plasma membrane | 68.45 | 62.61 |
TraesCS5A01G326700.1 | Wheat | cytosol, peroxisome, plasma membrane | 62.3 | 61.57 |
TraesCS5A01G326300.4 | Wheat | cytosol, plasma membrane, vacuole | 67.06 | 59.3 |
Zm00001d006494_P004 | Maize | plasma membrane | 64.48 | 57.32 |
VIT_12s0059g02230.t01 | Wine grape | cytosol, nucleus, plasma membrane | 72.02 | 52.76 |
KRH05771 | Soybean | cytosol, plasma membrane, vacuole | 46.43 | 48.45 |
KRH15267 | Soybean | cytosol, plasma membrane, vacuole | 45.63 | 47.62 |
KRG94951 | Soybean | plasma membrane | 37.7 | 47.5 |
KRH45605 | Soybean | cytosol, peroxisome, plasma membrane | 32.94 | 47.29 |
KRH14539 | Soybean | plasma membrane | 46.83 | 46.73 |
KRH74515 | Soybean | cytosol, peroxisome, plasma membrane | 44.84 | 46.03 |
KRG99422 | Soybean | plasma membrane | 45.83 | 45.38 |
KRH64942 | Soybean | golgi, peroxisome, plasma membrane | 43.85 | 45.38 |
KRH64938 | Soybean | plasma membrane | 43.45 | 44.88 |
KRG94953 | Soybean | golgi, peroxisome, plasma membrane | 43.65 | 44.81 |
KRH74529 | Soybean | cytosol, peroxisome, plasma membrane | 46.03 | 44.79 |
KRH64943 | Soybean | plasma membrane | 43.25 | 44.76 |
KRH64945 | Soybean | golgi, peroxisome, plasma membrane | 43.25 | 44.49 |
KRH62283 | Soybean | cytosol, peroxisome, plasma membrane | 43.85 | 43.94 |
KRG91572 | Soybean | vacuole | 42.66 | 43.52 |
KRH35253 | Soybean | plasma membrane | 42.66 | 43.52 |
KRH64948 | Soybean | golgi, peroxisome, plasma membrane | 42.66 | 43.52 |
KRG94946 | Soybean | plasma membrane | 42.46 | 43.23 |
KRH00809 | Soybean | plasma membrane | 43.25 | 43.17 |
KRG94947 | Soybean | golgi, peroxisome, plasma membrane | 42.46 | 43.15 |
KRH40412 | Soybean | plasma membrane | 43.45 | 42.94 |
KRH64944 | Soybean | plasma membrane | 36.11 | 42.42 |
KRH69641 | Soybean | plasma membrane | 40.08 | 41.06 |
KRH69631 | Soybean | mitochondrion | 40.08 | 39.84 |
KRH08881 | Soybean | plasma membrane | 36.31 | 38.36 |
KRH62279 | Soybean | cytosol, peroxisome, plasma membrane | 39.48 | 37.98 |
KRH08883 | Soybean | plasma membrane | 35.71 | 36.89 |
KRH38402 | Soybean | plasma membrane | 35.71 | 36.89 |
KRH38403 | Soybean | plasma membrane | 34.92 | 36.07 |
KRH38401 | Soybean | plasma membrane | 28.77 | 27.78 |
Protein Annotations
EntrezGene:100795338 | MapMan:24.2.4.1.1 | UniProt:A0A0R4J4K4 | EMBL:ACUP02007747 | ncoils:Coil | EnsemblPlantsGene:GLYMA_12G194000 |
GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006855 | GO:GO:0008150 |
GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | EnsemblPlants:KRH26788 |
ProteinID:KRH26788 | ProteinID:KRH26788.1 | InterPro:MATE_fam | PFAM:PF01554 | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF188 |
TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI00018C6713 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr12:+:35567230..35571578
Molecular Weight (calculated)
54376.1 Da
IEP (calculated)
6.140
GRAVY (calculated)
0.728
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSAEKEPLL TAEGTRSNSK HESSSHGQLE RILSDDTLPF LNRVGPATWI ELKLLFFLAA PAVIVYLINY LMSMSTQIFS GHLGNLELAA ASLGNTGIQM
101: FAYGLMLGMG SAVETLCGQA FGAQKYGMLG VYMQRSTILL SLAGVVLTVI YVFSEPMLIF LGESPRIASA AALFVYGLIP QIFAYAANFP IQKFLQAQSI
201: VAPSAYISAA TLVVHLGMSW VAVYEIGLGL LGASLVLSLS WWIMVIGQYV YIVKSERCRR TWQGFTWEAF SGLYGFFKLS AASAVMLCLE TWYFQILVLL
301: AGLLPNPELA LDSLSICTTI SGWVFMISVG FNAAASVRVS NELGARSPKS ASFSVVVVTV ISFIISVIAA LVVLALRDVI SYAFTGGEEV AAAVSDLCPL
401: LALSLVLNGI QPVLSGVAVG CGWQAFVAYV NVGCYYGVGI PLGAVLGFYF QFGAKGIWLG MLGGTVMQTI ILLWVTFRTD WTKEVEEAAK RLTKWEDKKE
501: PLLN
101: FAYGLMLGMG SAVETLCGQA FGAQKYGMLG VYMQRSTILL SLAGVVLTVI YVFSEPMLIF LGESPRIASA AALFVYGLIP QIFAYAANFP IQKFLQAQSI
201: VAPSAYISAA TLVVHLGMSW VAVYEIGLGL LGASLVLSLS WWIMVIGQYV YIVKSERCRR TWQGFTWEAF SGLYGFFKLS AASAVMLCLE TWYFQILVLL
301: AGLLPNPELA LDSLSICTTI SGWVFMISVG FNAAASVRVS NELGARSPKS ASFSVVVVTV ISFIISVIAA LVVLALRDVI SYAFTGGEEV AAAVSDLCPL
401: LALSLVLNGI QPVLSGVAVG CGWQAFVAYV NVGCYYGVGI PLGAVLGFYF QFGAKGIWLG MLGGTVMQTI ILLWVTFRTD WTKEVEEAAK RLTKWEDKKE
501: PLLN
001: MDSSPNDGVH QPLLHPQPSP SPPESTNGEL ETVLSDVETP LFLRLRKATI IESKLLFNLA APAVIVYMIN YLMSMSTQIF SGHLGNLELA AASLGNTGIQ
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
101: VFAYGLMLGM GSAVETLCGQ AYGGRKYEML GVYLQRSTVL LTLTGLLLTL IYVFSEPILL FLGESPAIAS AASLFVYGLI PQIFAYAANF PIQKFLQSQS
201: IVAPSAYIST ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR ETWRGFSVQA FSGLWSFFKL SAASAVMLCL ETWYFQILVL
301: LAGLLENPEL ALDSLSICMT ISGWVFMISV GFNAAISVRV SNELGAGNPK SAAFSVIIVN IYSLITCVIL AIVILACRDV LSYAFTEGKE VSDAVSDLCP
401: LLAVTLVLNG IQPVLSGVAV GCGWQTFVAK VNVGCYYIIG IPLGALFGFY FNFGAKGIWT GMIGGTVIQT FILAWVTFRT DWTKEVEEAS KRLDKWSNKK
501: QEVVPE
Arabidopsis Description
DTX40Protein DETOXIFICATION 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVD9]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.