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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • endoplasmic reticulum 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, plasma membrane
MultiLoc:endoplasmic reticulum
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G076010.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 HORVU1Hr1G076010.1 AT3G16310.1 21798944
AT3G21690.1 HORVU3Hr1G026980.2 AT3G16310.1 21798944
AT3G21690.1 HORVU3Hr1G071060.1 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G247700.2 Wheat plasma membrane 93.52 93.71
TraesCS2D01G228200.1 Wheat plasma membrane 93.32 93.51
TraesCS2A01G222300.1 Wheat plasma membrane 93.32 93.51
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 85.43 85.08
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 83.0 83.16
Zm00001d006494_P004 Maize plasma membrane 84.21 73.37
KRH26788 Soybean plasma membrane 64.78 63.49
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 65.38 62.84
CDY24250 Canola cytosol, peroxisome, plasma membrane 39.88 62.15
Bra001840.1-P Field mustard plasma membrane 57.49 62.14
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 63.36 61.86
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 62.75 61.63
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 63.16 61.54
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 64.17 61.43
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 63.16 61.42
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 60.12 61.36
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 62.75 61.14
CDY33129 Canola cytosol, peroxisome, plasma membrane 62.35 60.99
CDY69153 Canola cytosol, peroxisome, plasma membrane 39.07 60.88
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 61.54 60.8
CDY33131 Canola golgi, plasma membrane, vacuole 21.66 60.8
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 62.15 60.79
CDX92916 Canola cytosol, plasma membrane, vacuole 62.15 60.79
VIT_12s0059g02160.t01 Wine grape plasma membrane 63.36 60.78
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 61.13 60.52
CDY65669 Canola cytosol, peroxisome, plasma membrane 60.53 60.4
CDY33130 Canola cytosol, peroxisome, vacuole 37.65 60.39
CDY39493 Canola cytosol, peroxisome, plasma membrane 61.34 60.24
CDY19294 Canola cytosol, peroxisome, plasma membrane 62.55 60.12
KRH56125 Soybean plasma membrane 62.75 59.96
CDY39494 Canola cytosol, peroxisome, plasma membrane 62.35 59.92
Solyc12g005850.1.1 Tomato plasma membrane 61.94 59.77
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 58.91 59.75
CDY38631 Canola cytosol, peroxisome, vacuole 61.54 59.38
CDY19295 Canola cytosol, peroxisome, plasma membrane 35.83 58.22
KRH25385 Soybean plasma membrane 50.0 56.01
PGSC0003DMT400022543 Potato plasma membrane 58.7 55.34
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 43.93 43.93
HORVU5Hr1G008770.1 Barley plasma membrane 44.33 43.37
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 60.12 43.17
HORVU6Hr1G091840.1 Barley plasma membrane 42.71 42.03
HORVU4Hr1G011690.1 Barley plasma membrane 43.93 41.65
HORVU3Hr1G074290.9 Barley nucleus, peroxisome, plasma membrane 41.5 41.08
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 41.9 40.67
HORVU3Hr1G014320.2 Barley plasma membrane 40.08 40.57
HORVU5Hr1G069900.5 Barley golgi 41.5 40.04
HORVU5Hr1G045360.3 Barley cytosol, peroxisome, plasma membrane 40.69 39.65
HORVU0Hr1G022320.1 Barley plasma membrane 38.46 39.26
HORVU5Hr1G086830.4 Barley cytosol, peroxisome, plasma membrane 40.08 39.21
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 40.08 37.86
HORVU7Hr1G049240.3 Barley peroxisome 41.09 36.71
HORVU2Hr1G117540.1 Barley plasma membrane 35.02 36.19
HORVU0Hr1G010460.2 Barley cytosol 3.85 17.92
Protein Annotations
EnsemblPlants:HORVU2Hr1G046420.16EnsemblPlantsGene:HORVU2Hr1G046420GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF201PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B48406AUniProt:A0A287HWJ4MapMan:24.2.4.1.1:
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A287HWJ4]
Coordinates
chrchr2H:-:249323836..249326358
Molecular Weight (calculated)
52005.3 Da
IEP (calculated)
6.919
GRAVY (calculated)
0.828
Length
494 amino acids
Sequence
(BLAST)
001: MGPGDHAGVH SVDGRLEALL SGGGGARRMA AAAALELRLL APLAAPAVAV YMLIIVMSSA TQIFCGQLGN VQLAAASLGN NGIQVFAYGL MLGMGSAVET
101: LCGQAYGAEM YEMLGVYLQR STVLLMATGV PLAAMYAFSE PILLLLGQSP EIAGAAAEFA YGLIPQIFAY AANFPIQKFL QAQSIVAPSA YILAASMALH
201: VAMSWVAVYR LGLGLLGASL TLSLTWWVLV AGQFAYIVLS PRCKETWTGF TWAAFADLAG FAKLSAASAV MLALEVWYFQ VLILLAGMLP DPQLALDSLT
301: VCTSIQSWVF MISVGFNAAA SVRVGNELGA GNPRSAAFSA WIVTAMSALI AVVAGVVVFL LRHKLSYIFT GGEAVSRAVA DLCPLLVGTI VLCGIQPVLS
401: GVAVGCGWQA LVAYINIGCY YFIGVPLGAL LGFKFDYGIK GLWGGMIGGT LIQTIILLWI TFRTDWNKEA VTLSNDSPIS HAKPHLNHVP THYF
Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)
001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
Arabidopsis Description
DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.