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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • mitochondrion 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
iPSORT:mitochondrion
MultiLoc:golgi
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G384100.1 Wheat golgi, plasma membrane, vacuole 77.41 77.89
TraesCS2A01G534900.1 Wheat golgi, plasma membrane, vacuole 76.99 77.47
Os03t0626700-01 Rice golgi, plasma membrane, vacuole 68.62 68.76
HORVU4Hr1G011690.1 Barley plasma membrane 72.38 66.41
TraesCSU01G150400.1 Wheat plasma membrane 59.83 66.05
EER91211 Sorghum plasma membrane 65.27 63.29
Zm00001d033296_P002 Maize plasma membrane 65.27 63.03
GSMUA_Achr9P26370_001 Banana plasma membrane 55.23 56.65
HORVU3Hr1G014320.2 Barley plasma membrane 55.65 54.51
GSMUA_Achr5P01870_001 Banana plasma membrane 52.51 53.18
HORVU3Hr1G074290.9 Barley nucleus, peroxisome, plasma membrane 55.44 53.11
Solyc10g051130.1.1 Tomato plasma membrane 48.74 48.74
PGSC0003DMT400021339 Potato peroxisome, plasma membrane, vacuole 48.12 48.12
Solyc01g109320.2.1 Tomato peroxisome 48.54 46.68
Solyc01g109310.2.1 Tomato plasma membrane 43.1 43.28
PGSC0003DMT400064838 Potato plasma membrane 42.68 42.86
KRH15267 Soybean cytosol, plasma membrane, vacuole 42.05 41.61
VIT_18s0001g11760.t01 Wine grape plasma membrane 41.63 41.54
KRH05771 Soybean cytosol, plasma membrane, vacuole 41.84 41.41
Bra015613.1-P Field mustard cytosol, peroxisome, plasma membrane 41.42 40.91
CDY06731 Canola cytosol, peroxisome, plasma membrane 41.42 40.91
CDY17070 Canola cytosol, peroxisome, plasma membrane 41.21 40.7
AT1G47530.1 Thale cress cytosol, peroxisome, plasma membrane 41.0 40.5
HORVU6Hr1G091840.1 Barley plasma membrane 40.38 38.45
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 38.91 36.54
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 38.49 35.18
HORVU2Hr1G046420.16 Barley plasma membrane 36.19 35.02
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 34.94 33.81
HORVU5Hr1G045360.3 Barley cytosol, peroxisome, plasma membrane 35.36 33.33
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 35.77 33.27
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 35.36 33.27
HORVU5Hr1G086830.4 Barley cytosol, peroxisome, plasma membrane 35.15 33.27
HORVU0Hr1G022320.1 Barley plasma membrane 33.68 33.26
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 35.56 32.95
HORVU7Hr1G049240.3 Barley peroxisome 37.45 32.37
HORVU5Hr1G069900.5 Barley golgi 34.1 31.84
HORVU5Hr1G008770.1 Barley plasma membrane 32.85 31.09
HORVU0Hr1G010460.2 Barley cytosol 4.18 18.87
Protein Annotations
EnsemblPlants:HORVU2Hr1G117540.1EnsemblPlantsGene:HORVU2Hr1G117540GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF181PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B473585UniProt:A0A287JL16MapMan:24.2.4.1.1:
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A287JL16]
Coordinates
chrchr2H:+:740252470..740256814
Molecular Weight (calculated)
51859.4 Da
IEP (calculated)
8.346
GRAVY (calculated)
0.580
Length
478 amino acids
Sequence
(BLAST)
001: MGSKSWQESK VLWHIAFPAI LTAVFQFSIG FVTIGFVGHI GEVELGAVTV AVNVIEGFAY GVLVGMGSAL ETLCGQAVGA GQVDLLGVYI QRSWIICGAT
101: ALALAPTYVF TTPILRALHQ PTAISAVAGR YTRLALPQLF AYAANFPLQK FFQAQSKVWA MTFISGAGLG LHVALNYLFV TRLGHGIFGA AMIGNFTWWI
201: IIVAQFTYLV SGCFPEAWKG FSVLAFNNLS AFVKLSLASA VMLCLELWYY SAVLILVGLL KNAQLQVDVM SVCINYQLWT LMVAIGFNAA VSVRVSNELG
301: ANRPKAAKFS MIIAVSTSAA IGAVFLAVFL IWRTELPRFF SDNDKVVGGA AKLGYLLAAS IFLNSIQPVL SGTYHYANQL PIFILPSDPN DNWNIWLCRC
401: GDRSRVADAC GVHKHCVLLL VWHPTGSPLW LQAKTWCNGD LGGHVNWHAA ADCYTSHNLL PSQVGESGHV GRREDKEV
Best Arabidopsis Sequence Match ( AT1G12950.1 )
(BLAST)
001: MEKDNDFKDP FLASTEEEEL DPATQKALME YLGVGSRASS LVSFSSTAVD IPPISGVGDF VREFRIESRK LWKLAGPAIF TTMSQYSLGA VTQVFAGHIS
101: TLALAAVSIE NSVIAGFSFG IMLGMGSALE TLCGQAFGAG KVSMLGVYLQ RSWVILSVTA LFLSLIYIFA APILTFIGQT AAISAMAGIF SIYMIPQIFA
201: YAINFPTAKF LQSQSKIMVM AGISGVVLVI HSFFTWLVMS RLHWGLPGLA LVLNTSWWVI VVAQLVYIFN CTCGEAWSGF TWEAFHNLWG FVKLSLASAA
301: MLCLEIWYFM ALVLFAGYLK NAEVSVAALS ICMNILGWAA MVAFGTNAAV SVRVSNELGA SHPRTAKFSL VVAVILSTAI GMFIAAGLLF FRNEYPVLFV
401: EDEEVRNVVR ELTPMLAFCI VINNVQPVLS GVAVGAGWQA VVAYVNIACY YLFGVPFGLL LGFKLEYGVM GIWWGMVTGT FVQSIVLTWM ICKTNWEKEA
501: SMAEERIKEW GGVPAEKETL LN
Arabidopsis Description
DTX31Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WCP4]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.