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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plasma membrane

Predictor Summary:
  • plasma membrane 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane
Any Predictor:plasma membrane
MultiLoc:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G076010.1
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 HORVU1Hr1G076010.1 AT3G16310.1 21798944
AT3G21690.1 HORVU3Hr1G026980.2 AT3G16310.1 21798944
AT3G21690.1 HORVU3Hr1G071060.1 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCSU01G124400.1 Wheat plasma membrane, plastid 83.46 85.8
TraesCS4B01G388800.1 Wheat plasma membrane 83.07 85.57
TraesCS5A01G553200.1 Wheat plasma membrane 82.88 85.37
KXG37120 Sorghum plasma membrane 75.29 76.63
Zm00001d021629_P003 Maize plasma membrane 73.74 73.88
CDY24250 Canola cytosol, peroxisome, plasma membrane 42.8 69.4
CDY69153 Canola cytosol, peroxisome, plasma membrane 42.61 69.09
Bra001840.1-P Field mustard plasma membrane 60.7 68.27
KRH26788 Soybean plasma membrane 66.54 67.86
CDY33130 Canola cytosol, peroxisome, vacuole 40.27 67.21
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 65.95 67.0
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 65.76 66.67
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 65.76 66.67
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 62.65 66.53
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 64.98 66.4
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 65.37 66.14
CDY33129 Canola cytosol, peroxisome, plasma membrane 64.98 66.14
Bra031296.1-P Field mustard cytosol, peroxisome, plasma membrane 64.98 66.14
KRH56125 Soybean plasma membrane 66.15 65.76
CDX92916 Canola cytosol, plasma membrane, vacuole 64.59 65.74
Bra031297.1-P Field mustard cytosol, peroxisome, vacuole 63.81 65.73
HORVU2Hr1G046420.16 Barley plasma membrane 62.84 65.38
Zm00001d006493_P001 Maize plasma membrane 72.37 65.26
CDY19295 Canola cytosol, peroxisome, plasma membrane 38.52 65.13
Bra023866.1-P Field mustard cytosol, peroxisome, plasma membrane 61.67 65.09
CDY19294 Canola cytosol, peroxisome, plasma membrane 64.79 64.79
CDY39494 Canola cytosol, peroxisome, plasma membrane 64.79 64.79
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 64.98 64.73
CDY38631 Canola cytosol, peroxisome, vacuole 64.4 64.65
Solyc12g005850.1.1 Tomato plasma membrane 64.01 64.26
CDY65669 Canola cytosol, peroxisome, plasma membrane 61.87 64.24
VIT_12s0059g02160.t01 Wine grape plasma membrane 64.01 63.88
Bra023867.1-P Field mustard cytosol, peroxisome, plasma membrane 61.87 63.6
CDY39493 Canola cytosol, peroxisome, plasma membrane 62.06 63.42
KRH25385 Soybean plasma membrane 53.5 62.36
CDY33131 Canola golgi, plasma membrane, vacuole 21.01 61.36
PGSC0003DMT400022543 Potato plasma membrane 61.09 59.92
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 63.62 47.53
HORVU5Hr1G008770.1 Barley plasma membrane 42.8 43.56
HORVU6Hr1G091840.1 Barley plasma membrane 41.63 42.63
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 41.63 42.04
HORVU4Hr1G078230.1 Barley cytosol, peroxisome, plasma membrane 39.88 41.5
HORVU3Hr1G074290.9 Barley nucleus, peroxisome, plasma membrane 40.27 41.48
HORVU5Hr1G045360.3 Barley cytosol, peroxisome, plasma membrane 40.66 41.22
HORVU5Hr1G086830.4 Barley cytosol, peroxisome, plasma membrane 39.88 40.59
HORVU7Hr1G027270.10 Barley mitochondrion, peroxisome, vacuole 41.25 40.54
HORVU5Hr1G069900.5 Barley golgi 40.27 40.43
HORVU3Hr1G014320.2 Barley plasma membrane 38.13 40.16
HORVU4Hr1G011690.1 Barley plasma membrane 40.08 39.54
HORVU0Hr1G022320.1 Barley plasma membrane 37.16 39.46
HORVU2Hr1G117540.1 Barley plasma membrane 33.27 35.77
HORVU7Hr1G049240.3 Barley peroxisome 38.33 35.62
HORVU0Hr1G010460.2 Barley cytosol 4.67 22.64
Protein Annotations
EnsemblPlants:HORVU1Hr1G007910.1EnsemblPlantsGene:HORVU1Hr1G007910GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF200PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B47B85CUniProt:A0A287EKD7MapMan:24.2.4.1.1:
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A287EKD7]
Coordinates
chrchr1H:+:17189091..17196218
Molecular Weight (calculated)
55149.0 Da
IEP (calculated)
8.245
GRAVY (calculated)
0.695
Length
514 amino acids
Sequence
(BLAST)
001: YINSPEAHRR DRAHDPSTQA QAGRGSSMDE SSSPLLALHA GSRELETILS NTAAPWARRA WAGAAVELPL LLRLALPAVA VYLINYLMSM STQIMCGQLG
101: NLELAAASLG NTGIQIFSYG LMLGMGSAVE TLCGQAYGAH KYNMLGVYLQ RSTILLTVTG VPLAVIYVYS GPILLLLGES ERIAAAAAVF VYGLIPQIFA
201: YAANFPIQKF LQAQSIVAPS AYIAGATLVL HVALSWLAVY KLGLGLLGAS LVLSLSWWLI VLAQFAYILT TPRCRDTWTG FTTQAFSGLC GFARLSAASA
301: VMLCLETWYF QIMVLIAGHL HNPQLSLDSL SICMSIFGWV FMVAIGFNAA ASVRVGNELG AGNPRAAAFS VVMSTTMSFL LAVVAAVVVL FFRDRISYLF
401: TGGEAVANAV SDLCPLLAIT LILNGVQPVL SGVAVGCGWQ VFVAYVNVGC YYFIGIPLGV FMGFYLGLGA KGVWSGMVIG GTLLQTLILL WVTFRTDWQH
501: EVDVERKNHH KKCK
Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)
001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
Arabidopsis Description
DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.