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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, peroxisome, vacuole

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, vacuole
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:vacuole
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX97739
CDY30157

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G21690.1 CDX97739 AT3G16310.1 21798944
AT3G21690.1 CDY30157 AT3G16310.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69153 Canola cytosol, peroxisome, plasma membrane 89.61 87.07
CDY19295 Canola cytosol, peroxisome, plasma membrane 85.71 86.84
CDY24250 Canola cytosol, peroxisome, plasma membrane 89.29 86.75
CDY38631 Canola cytosol, peroxisome, vacuole 97.4 58.59
CDY19294 Canola cytosol, peroxisome, plasma membrane 95.13 57.0
CDY39494 Canola cytosol, peroxisome, plasma membrane 95.13 57.0
CDX92916 Canola cytosol, plasma membrane, vacuole 90.26 55.05
CDY33129 Canola cytosol, peroxisome, plasma membrane 89.94 54.85
AT3G21690.1 Thale cress cytosol, peroxisome, plasma membrane 88.96 54.15
CDY65669 Canola cytosol, peroxisome, plasma membrane 86.04 53.54
CDY39493 Canola cytosol, peroxisome, plasma membrane 87.01 53.28
KRH25385 Soybean plasma membrane 75.97 53.06
PGSC0003DMT400065544 Potato cytosol, peroxisome, plasma membrane 75.0 47.73
GSMUA_Achr6P00360_001 Banana vacuole 62.66 47.42
Solyc07g052380.2.1 Tomato cytosol, peroxisome, plasma membrane 75.0 45.92
VIT_12s0059g02220.t01 Wine grape cytosol, peroxisome, plasma membrane, plastid 75.32 45.76
VIT_12s0059g02180.t01 Wine grape cytosol, peroxisome, plasma membrane 74.68 45.36
KRH56125 Soybean plasma membrane 75.65 45.07
KRH26788 Soybean plasma membrane 73.7 45.04
Solyc12g005850.1.1 Tomato plasma membrane 73.38 44.14
GSMUA_Achr2P14000_001 Banana peroxisome, plasma membrane, vacuole 74.35 43.95
PGSC0003DMT400022543 Potato plasma membrane 73.38 43.13
VIT_12s0059g02160.t01 Wine grape plasma membrane 72.08 43.11
KXG37120 Sorghum plasma membrane 69.81 42.57
TraesCS3D01G506500.3 Wheat cytosol, peroxisome, plasma membrane 68.18 42.08
Zm00001d013809_P002 Maize plasma membrane 67.86 42.05
GSMUA_Achr9P11610_001 Banana plasma membrane 67.53 42.02
EER91319 Sorghum cytosol, peroxisome, plasma membrane 68.51 41.95
EER91321 Sorghum plasma membrane 68.18 41.92
TraesCS3A01G500000.1 Wheat cytosol, peroxisome, plasma membrane 67.53 41.85
TraesCS3D01G506700.1 Wheat cytosol, peroxisome, plasma membrane 67.53 41.77
TraesCS3A01G499800.1 Wheat cytosol, peroxisome, plasma membrane 67.21 41.73
TraesCS3B01G563400.4 Wheat cytosol, peroxisome, plasma membrane 67.53 41.68
KXG38133 Sorghum cytosol, peroxisome, vacuole 69.81 41.67
TraesCS3B01G562500.1 Wheat cytosol, plasma membrane, vacuole 66.56 41.67
TraesCS3D01G506200.1 Wheat cytosol, plasma membrane, vacuole 66.56 41.67
TraesCS3B01G563700.1 Wheat cytosol, peroxisome, plasma membrane 67.21 41.65
TraesCS3B01G563200.2 Wheat cytosol, peroxisome, plasma membrane 67.21 41.48
TraesCS5D01G332300.1 Wheat cytosol, peroxisome, plasma membrane 68.51 41.45
TraesCS3A01G499300.1 Wheat cytosol, peroxisome, plasma membrane 66.88 41.45
TraesCS3B01G563100.2 Wheat cytosol, peroxisome, plasma membrane 67.21 41.32
TraesCS5B01G326600.1 Wheat cytosol, peroxisome, plasma membrane 68.51 41.21
Zm00001d033063_P001 Maize vacuole 66.88 41.2
Zm00001d033061_P002 Maize cytosol, plasma membrane, vacuole 65.91 41.18
TraesCS3D01G506100.1 Wheat plasma membrane 66.56 41.16
Zm00001d033062_P001 Maize cytosol, plasma membrane, plastid 68.51 41.13
Os03t0570800-01 Rice cytosol, peroxisome, plasma membrane 66.56 41.0
Os03t0572900-01 Rice plasma membrane 66.56 41.0
TraesCS3B01G563500.1 Wheat cytosol, peroxisome, plasma membrane 66.23 40.88
Os03t0571900-01 Rice plasma membrane 68.83 40.77
TraesCS3A01G499200.1 Wheat plasma membrane 65.91 40.76
TraesCS3B01G562400.2 Wheat plasma membrane 65.58 40.56
Zm00001d021629_P003 Maize plasma membrane 67.53 40.55
EER93896 Sorghum cytosol, peroxisome, plasma membrane 68.83 40.46
TraesCSU01G124400.1 Wheat plasma membrane, plastid 65.58 40.4
TraesCS4B01G388800.1 Wheat plasma membrane 65.26 40.28
HORVU1Hr1G007910.1 Barley peroxisome, plasma membrane 67.21 40.27
GSMUA_Achr4P23760_001 Banana plasma membrane 60.06 40.22
HORVU5Hr1G082890.5 Barley cytosol, peroxisome, plasma membrane 66.23 40.16
Zm00001d013811_P001 Maize cytosol, peroxisome, plasma membrane 65.91 40.12
HORVU3Hr1G110460.3 Barley cytosol, peroxisome 67.21 40.12
TraesCS5A01G553200.1 Wheat plasma membrane 64.94 40.08
CDY64933 Canola plasma membrane 65.26 39.8
TraesCS1B01G037000.1 Wheat cytosol, peroxisome, vacuole 66.23 39.77
TraesCS1D01G030400.1 Wheat cytosol, peroxisome, plasma membrane 65.91 39.65
Zm00001d013810_P001 Maize cytosol, mitochondrion, peroxisome, plasma membrane 67.86 39.58
TraesCS1A01G029900.1 Wheat cytosol, peroxisome, plasma membrane 65.91 39.57
CDY12916 Canola cytosol, plasma membrane, vacuole 63.64 39.12
CDY19507 Canola cytosol, plasma membrane, vacuole 63.64 39.12
CDY33962 Canola plasma membrane 39.94 38.44
CDY64820 Canola plasma membrane 64.94 38.31
CDY70471 Canola cytosol, peroxisome, plasma membrane 37.66 38.28
TraesCS2A01G222300.1 Wheat plasma membrane 61.04 38.13
TraesCS2B01G247700.2 Wheat plasma membrane 60.71 37.93
TraesCS2D01G228200.1 Wheat plasma membrane 60.71 37.93
EER97294 Sorghum endoplasmic reticulum, peroxisome, plasma membrane 61.04 37.9
CDY25329 Canola plasma membrane 61.36 37.72
CDY47166 Canola plasma membrane 61.36 37.72
HORVU2Hr1G046420.16 Barley plasma membrane 60.39 37.65
TraesCS3B01G485100.1 Wheat plasma membrane 66.88 37.39
CDY08798 Canola cytosol, peroxisome, plasma membrane 38.64 37.07
Zm00001d006493_P001 Maize plasma membrane 67.86 36.67
CDY14558 Canola plasma membrane 38.31 36.65
TraesCS5A01G326300.4 Wheat cytosol, plasma membrane, vacuole 67.53 36.49
CDX76392 Canola plasma membrane 53.9 36.01
CDY34637 Canola plasma membrane 52.27 35.08
Os07t0516600-01 Rice endoplasmic reticulum, peroxisome, plasma membrane 55.84 34.89
CDY34833 Canola plasma membrane 51.95 34.86
CDX79109 Canola plasma membrane 56.17 34.81
TraesCS5A01G326700.1 Wheat cytosol, peroxisome, plasma membrane 56.49 34.12
CDX94061 Canola peroxisome, plasma membrane, vacuole 55.84 33.92
CDX94063 Canola plasma membrane 55.84 33.92
CDX76391 Canola plasma membrane 55.19 33.86
CDY27434 Canola plasma membrane 55.19 33.86
Os03t0571700-01 Rice golgi, peroxisome, plasma membrane 40.58 33.78
CDX98711 Canola peroxisome, plasma membrane, vacuole 55.19 33.53
CDX98712 Canola plasma membrane 55.19 33.53
CDY27431 Canola plasma membrane 54.87 33.33
Zm00001d006494_P004 Maize plasma membrane 61.36 33.33
VIT_12s0059g02230.t01 Wine grape cytosol, nucleus, plasma membrane 74.35 33.28
CDY07257 Canola endoplasmic reticulum, vacuole 33.12 31.19
CDX94064 Canola plasma membrane 41.56 30.92
CDX98713 Canola plasma membrane 42.86 29.01
CDY06731 Canola cytosol, peroxisome, plasma membrane 43.83 27.89
CDY17070 Canola cytosol, peroxisome, plasma membrane 43.83 27.89
CDY26602 Canola cytosol, peroxisome, vacuole 46.43 27.55
CDY16041 Canola cytosol, peroxisome, vacuole 46.1 27.36
CDY21076 Canola cytosol, peroxisome, plasma membrane 45.78 27.17
CDX83627 Canola cytosol, peroxisome, plasma membrane 44.16 27.04
CDY34598 Canola cytosol, peroxisome, vacuole 45.45 26.98
CDY13643 Canola cytosol, peroxisome, plasma membrane 43.83 26.84
CDX67772 Canola plasma membrane 44.16 26.82
CDX98344 Canola plasma membrane 43.83 26.63
CDX83628 Canola plasma membrane 33.44 26.21
CDX69834 Canola plasma membrane 39.94 25.84
CDY38453 Canola plasma membrane 33.12 25.63
CDX81281 Canola plasma membrane 38.96 24.79
CDX69835 Canola plasma membrane 38.31 24.23
CDX97005 Canola plasma membrane 38.31 24.23
CDX81176 Canola plasma membrane 38.31 24.18
CDX93794 Canola plasma membrane 38.64 24.14
CDY49481 Canola plasma membrane 34.09 24.03
CDY40095 Canola plasma membrane 37.99 24.02
CDX97001 Canola plasma membrane 37.99 23.83
CDY44967 Canola plasma membrane 30.84 23.63
CDY40093 Canola plasma membrane 38.31 23.51
CDX89406 Canola plasma membrane 38.96 23.44
CDX85764 Canola plasma membrane 37.99 23.4
CDX81174 Canola plasma membrane 30.84 23.4
CDX94432 Canola plasma membrane 38.64 23.29
CDX78379 Canola peroxisome, plasma membrane, vacuole 34.74 23.16
CDY08796 Canola plasma membrane 39.94 22.69
CDY61495 Canola plasma membrane 39.94 22.57
CDX78378 Canola plasma membrane 35.39 22.47
CDX81172 Canola plasma membrane 35.39 22.47
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 39.61 22.47
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 39.61 22.47
CDY01224 Canola plasma membrane 24.03 21.96
CDY54720 Canola plasma membrane 39.61 21.71
CDY16896 Canola plasma membrane 33.77 20.97
CDY08797 Canola plasma membrane 38.31 20.89
CDY50654 Canola plasma membrane 32.79 20.24
CDY51758 Canola plasma membrane 32.79 20.24
CDY29945 Canola plasma membrane 32.47 20.08
CDY21177 Canola plasma membrane 31.82 19.68
CDY50190 Canola nucleus, peroxisome, plasma membrane 37.66 19.24
CDX92726 Canola nucleus, peroxisome, plasma membrane 37.01 19.06
CDX84047 Canola plasma membrane 37.34 16.34
CDX69836 Canola plasma membrane 38.31 11.5
CDY33131 Canola golgi, plasma membrane, vacuole 0.65 1.14
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 0.65 1.09
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078H3C8UniProt:A0A078H3C8EnsemblPlants:CDY33130ProteinID:CDY33130ProteinID:CDY33130.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00053821001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF188TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0004EF1038SEG:seg::::
Description
BnaCnng07010DBnaCnng07010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H3C8]
Coordinates
chrLK032307:+:37972..38993
Molecular Weight (calculated)
33672.5 Da
IEP (calculated)
4.812
GRAVY (calculated)
0.681
Length
308 amino acids
Sequence
(BLAST)
001: MDSSQYDGVY QPLLYPPADG TVPLSPSTES SNGELERVLS DVETPFFHRL REATMIESKL LFKLAAPAVI VYMIGNLELA AASLGNTGIQ ISAYGLMLGM
101: GSAVETLCGQ AFGGRKYEML GIYLQRSTVL LTLTGLLLTL IYVFSKPILL FLGESPEIAS AASIFVYGLI PQIFAYAVNF PIQKFLQAQS IVAPSAYIST
201: ATLFVHLLLS WLAVYKLGMG LLGASLVLSL SWWIIVVAQF VYIVTSERCR QTWRGFSVQA FSGLPSFFKL SAASAVMLCL ETWYFQILVL LAGLLENPEL
301: ALDSLSIW
Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)
001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
Arabidopsis Description
DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.