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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, peroxisome

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13643 Canola cytosol, peroxisome, plasma membrane 98.81 98.81
Bra025214.1-P Field mustard plasma membrane 79.92 95.94
CDX83628 Canola plasma membrane 69.58 89.06
AT3G26590.1 Thale cress cytosol, peroxisome, plasma membrane 88.07 88.6
AT5G38030.1 Thale cress cytosol, peroxisome, plasma membrane 85.69 86.55
CDY21076 Canola cytosol, peroxisome, plasma membrane 76.74 74.37
CDY34598 Canola cytosol, peroxisome, vacuole 76.14 73.8
CDY26602 Canola cytosol, peroxisome, vacuole 76.14 73.8
CDY16041 Canola cytosol, peroxisome, vacuole 75.75 73.41
KRG99422 Soybean plasma membrane 71.57 70.73
KRH45605 Soybean cytosol, peroxisome, plasma membrane 49.11 70.37
VIT_00s0225g00050.t01 Wine grape cytosol, peroxisome, plasma membrane 69.58 68.76
PGSC0003DMT400047906 Potato cytosol, peroxisome, plasma membrane 68.59 67.12
Solyc05g013450.2.1 Tomato cytosol, peroxisome, plasma membrane 68.59 66.99
KRH74529 Soybean cytosol, peroxisome, plasma membrane 67.99 66.02
KRH69631 Soybean mitochondrion 58.25 57.79
CDY06731 Canola cytosol, peroxisome, plasma membrane 52.49 54.55
CDY17070 Canola cytosol, peroxisome, plasma membrane 52.29 54.34
CDY07257 Canola endoplasmic reticulum, vacuole 31.81 48.93
CDY64933 Canola plasma membrane 47.91 47.72
CDY34637 Canola plasma membrane 43.14 47.28
CDY34833 Canola plasma membrane 42.94 47.06
CDY19507 Canola cytosol, plasma membrane, vacuole 46.52 46.71
CDY12916 Canola cytosol, plasma membrane, vacuole 46.52 46.71
CDY33131 Canola golgi, plasma membrane, vacuole 16.3 46.59
CDY01224 Canola plasma membrane 31.21 46.59
CDY25329 Canola plasma membrane 45.92 46.11
CDY47166 Canola plasma membrane 45.92 46.11
CDX89406 Canola plasma membrane 46.32 45.51
CDX94432 Canola plasma membrane 45.92 45.21
CDY19294 Canola cytosol, peroxisome, plasma membrane 45.53 44.55
CDY39493 Canola cytosol, peroxisome, plasma membrane 44.53 44.53
CDY39494 Canola cytosol, peroxisome, plasma membrane 45.33 44.36
CDX92916 Canola cytosol, plasma membrane, vacuole 44.53 44.36
CDY38631 Canola cytosol, peroxisome, vacuole 45.13 44.34
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 47.71 44.2
CDY24250 Canola cytosol, peroxisome, plasma membrane 27.83 44.16
CDY33130 Canola cytosol, peroxisome, vacuole 27.04 44.16
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 16.1 44.02
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 47.51 44.01
CDY44967 Canola plasma membrane 34.99 43.78
CDY33962 Canola plasma membrane 27.83 43.75
CDY65669 Canola cytosol, peroxisome, plasma membrane 42.94 43.64
CDY33129 Canola cytosol, peroxisome, plasma membrane 43.74 43.56
CDY69153 Canola cytosol, peroxisome, plasma membrane 27.44 43.53
CDY64820 Canola plasma membrane 45.13 43.49
CDY19295 Canola cytosol, peroxisome, plasma membrane 26.24 43.42
CDX81281 Canola plasma membrane 41.75 43.39
CDX97005 Canola plasma membrane 41.95 43.33
CDX79109 Canola plasma membrane 42.74 43.26
CDX93794 Canola plasma membrane 42.35 43.2
CDY40095 Canola plasma membrane 41.55 42.92
CDX69835 Canola plasma membrane 41.55 42.92
CDX78379 Canola peroxisome, plasma membrane, vacuole 39.16 42.64
CDY70471 Canola cytosol, peroxisome, plasma membrane 25.45 42.24
CDX81176 Canola plasma membrane 40.95 42.21
CDX98711 Canola peroxisome, plasma membrane, vacuole 42.54 42.21
CDY49481 Canola plasma membrane 36.58 42.11
CDX76391 Canola plasma membrane 41.95 42.03
CDX94061 Canola peroxisome, plasma membrane, vacuole 42.35 42.01
CDX94064 Canola plasma membrane 34.39 41.79
CDY27434 Canola plasma membrane 41.55 41.63
CDX85764 Canola plasma membrane 41.15 41.4
CDX97001 Canola plasma membrane 40.36 41.34
CDY40093 Canola plasma membrane 41.15 41.24
CDX76392 Canola plasma membrane 37.57 41.0
CDX69834 Canola plasma membrane 38.77 40.97
CDX98712 Canola plasma membrane 41.15 40.83
CDY14558 Canola plasma membrane 26.04 40.68
CDY27431 Canola plasma membrane 40.95 40.63
CDX94063 Canola plasma membrane 40.95 40.63
CDX81172 Canola plasma membrane 39.16 40.62
CDY08798 Canola cytosol, peroxisome, plasma membrane 25.84 40.5
CDX67772 Canola plasma membrane 40.56 40.24
CDX98344 Canola plasma membrane 40.56 40.24
CDX98713 Canola plasma membrane 36.18 40.0
CDX78378 Canola plasma membrane 38.57 40.0
CDY08796 Canola plasma membrane 42.54 39.48
CDY61495 Canola plasma membrane 42.54 39.27
CDX92726 Canola nucleus, peroxisome, plasma membrane 45.92 38.63
CDY50190 Canola nucleus, peroxisome, plasma membrane 45.92 38.31
CDX81174 Canola plasma membrane 30.82 38.18
CDY54720 Canola plasma membrane 42.15 37.72
CDY08797 Canola plasma membrane 41.55 36.99
CDY51758 Canola plasma membrane 36.18 36.47
CDY38453 Canola plasma membrane 28.23 35.68
CDY50654 Canola plasma membrane 35.39 35.67
CDY21177 Canola plasma membrane 34.99 35.34
CDY29945 Canola plasma membrane 34.59 34.94
CDY16896 Canola plasma membrane 30.82 31.25
CDX84047 Canola plasma membrane 38.97 27.84
CDX69836 Canola plasma membrane 40.95 20.08
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078D3D1EnsemblPlants:CDX83627ProteinID:CDX83627ProteinID:CDX83627.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00139300001InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF259TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EEEB3BSEG:seg
Description
BnaC07g23670D
Coordinates
chrLK031833:-:1167867..1173615
Molecular Weight (calculated)
54060.8 Da
IEP (calculated)
6.031
GRAVY (calculated)
0.778
Length
503 amino acids
Sequence
(BLAST)
001: MGKDKNLTEA LLSTAENPDP TTHLPVSPAN DIPPITTIGG FVKEFNVEAK KLWYLAGPAI FTSVNQYSLG AVTQVFAGHV STIALAAVSV ENSVIAGFSF
101: GIMLGMGSAL ETLCGQAFGA GKLSMLGVYL QRSWVILNVT ALILTLLYIF AAPILASIGQ TPAISSAAGV FSIYMIPQIF AYAVNFPTAK FLQSQSKIMV
201: MAAISAAALA LHVPITWFVM EKLKWGMAGL AVVLNGSWWF IDVAQLVYIF SGTCGEAWSG LSWEAFHNLW GFVRLSLASA VMLCLEVWYF MAIILFAGYL
301: KNAEVSVAAL SICMNILGWT AMVAIGMNTA VSVRVSNELG ANHPRTAKFS LVVAVITSTL IGVIVSTVLL IFRNQYPSLF VGDEEVIILV KELTPILALS
401: IVINNVQPVL SGVAVGAGWQ AVVAYVNIAC YYLFGIPFGL LLGYKLDFGV KGIWCGMLTG TVVQTIVLTW MICKTNWAKE AAMADDRIRE WGGEVSEIEQ
501: LSN
Best Arabidopsis Sequence Match ( AT3G26590.1 )
(BLAST)
001: MAKDKDITET LLTAAEERSD LPFLSVDDIP PITTVGGFVR EFNVETKKLW YLAGPAIFTS VNQYSLGAIT QVFAGHISTI ALAAVSVENS VVAGFSFGIM
101: LGMGSALETL CGQAFGAGKL SMLGVYLQRS WVILNVTALI LSLLYIFAAP ILASIGQTAA ISSAAGIFSI YMIPQIFAYA INFPTAKFLQ SQSKIMVMAV
201: ISAVALVIHV PLTWFVIVKL QWGMPGLAVV LNASWCFIDM AQLVYIFSGT CGEAWSGFSW EAFHNLWSFV RLSLASAVML CLEVWYFMAI ILFAGYLKNA
301: EISVAALSIC MNILGWTAMI AIGMNTAVSV RVSNELGANH PRTAKFSLLV AVITSTLIGF IVSMILLIFR DQYPSLFVKD EKVIILVKEL TPILALSIVI
401: NNVQPVLSGV AVGAGWQAVV AYVNIACYYV FGIPFGLLLG YKLNYGVMGI WCGMLTGTVV QTIVLTWMIC KTNWDTEASM AEDRIREWGG EVSEIKQLIN
Arabidopsis Description
DTX29Protein DETOXIFICATION 29 [Source:UniProtKB/Swiss-Prot;Acc:Q38956]
SUBAcon: [cytosol,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.