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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013957.1-P Field mustard plasma membrane 99.75 79.88
CDY16896 Canola plasma membrane 97.24 78.02
AT5G17700.2 Thale cress plasma membrane 91.21 73.04
CDY50654 Canola plasma membrane 78.39 62.53
CDY51758 Canola plasma membrane 77.89 62.12
CDY21177 Canola plasma membrane 76.38 61.04
CDY29945 Canola plasma membrane 75.88 60.64
VIT_08s0056g01040.t01 Wine grape golgi, peroxisome, plasma membrane 46.48 47.93
VIT_08s0056g01120.t01 Wine grape plasma membrane 56.28 46.19
PGSC0003DMT400072250 Potato plasma membrane 55.28 45.36
Solyc10g081260.1.1 Tomato plasma membrane 55.28 45.36
VIT_08s0056g01070.t01 Wine grape plasma membrane 54.52 44.74
VIT_08s0056g01080.t01 Wine grape plasma membrane 55.03 42.69
VIT_08s0056g01000.t01 Wine grape plasma membrane, vacuole 42.96 41.11
CDY70471 Canola cytosol, peroxisome, plasma membrane 28.89 37.95
CDY33962 Canola plasma membrane 29.9 37.19
CDY08798 Canola cytosol, peroxisome, plasma membrane 29.4 36.45
CDY44967 Canola plasma membrane 36.68 36.32
CDY14558 Canola plasma membrane 29.15 36.02
CDX93794 Canola plasma membrane 44.22 35.7
CDY01224 Canola plasma membrane 29.15 34.42
CDX78379 Canola peroxisome, plasma membrane, vacuole 39.45 33.98
CDX69835 Canola plasma membrane 41.46 33.88
CDY24250 Canola cytosol, peroxisome, plasma membrane 26.88 33.75
CDX97005 Canola plasma membrane 41.21 33.68
CDX85764 Canola plasma membrane 42.21 33.6
CDY69153 Canola cytosol, peroxisome, plasma membrane 26.63 33.44
CDX69834 Canola plasma membrane 39.95 33.4
CDY40093 Canola plasma membrane 41.96 33.27
CDX81281 Canola plasma membrane 40.45 33.26
CDX81176 Canola plasma membrane 40.7 33.2
CDY33130 Canola cytosol, peroxisome, vacuole 25.63 33.12
CDX97001 Canola plasma membrane 40.7 32.99
CDY40095 Canola plasma membrane 39.95 32.65
CDX78378 Canola plasma membrane 39.7 32.58
CDY19295 Canola cytosol, peroxisome, plasma membrane 24.62 32.24
CDX81172 Canola plasma membrane 39.2 32.16
CDY49481 Canola plasma membrane 33.67 30.66
CDX76392 Canola plasma membrane 34.42 29.72
CDY08796 Canola plasma membrane 40.2 29.52
CDY38631 Canola cytosol, peroxisome, vacuole 37.94 29.49
CDY61495 Canola plasma membrane 39.95 29.17
CDY17070 Canola cytosol, peroxisome, plasma membrane 35.43 29.13
CDY06731 Canola cytosol, peroxisome, plasma membrane 35.43 29.13
CDX92916 Canola cytosol, plasma membrane, vacuole 36.93 29.11
CDX81174 Canola plasma membrane 29.65 29.06
CDY39494 Canola cytosol, peroxisome, plasma membrane 37.44 28.99
CDY19294 Canola cytosol, peroxisome, plasma membrane 37.44 28.99
CDX94063 Canola plasma membrane 36.43 28.6
CDX98712 Canola plasma membrane 36.43 28.6
CDX94432 Canola plasma membrane 36.68 28.57
CDX89406 Canola plasma membrane 36.68 28.52
CDY33129 Canola cytosol, peroxisome, plasma membrane 36.18 28.51
CDY54720 Canola plasma membrane 40.2 28.47
CDY34637 Canola plasma membrane 32.66 28.32
CDX83628 Canola plasma membrane 27.89 28.24
CDX83627 Canola cytosol, peroxisome, plasma membrane 35.68 28.23
CDY25329 Canola plasma membrane 35.43 28.14
CDY12916 Canola cytosol, plasma membrane, vacuole 35.43 28.14
CDY19507 Canola cytosol, plasma membrane, vacuole 35.43 28.14
CDY47166 Canola plasma membrane 35.43 28.14
CDY07257 Canola endoplasmic reticulum, vacuole 23.12 28.13
CDY34833 Canola plasma membrane 32.41 28.1
CDY65669 Canola cytosol, peroxisome, plasma membrane 34.92 28.08
CDY13643 Canola cytosol, peroxisome, plasma membrane 35.43 28.03
CDX79109 Canola plasma membrane 34.92 27.97
CDY08797 Canola plasma membrane 39.7 27.96
CDX76391 Canola plasma membrane 35.18 27.89
CDY27434 Canola plasma membrane 34.92 27.69
CDY39493 Canola cytosol, peroxisome, plasma membrane 34.92 27.63
CDY64933 Canola plasma membrane 34.67 27.33
CDX98711 Canola peroxisome, plasma membrane, vacuole 34.67 27.22
CDY27431 Canola plasma membrane 34.42 27.02
CDY34598 Canola cytosol, peroxisome, vacuole 35.18 26.98
CDY16041 Canola cytosol, peroxisome, vacuole 35.18 26.98
CDX98344 Canola plasma membrane 34.17 26.82
CDX94061 Canola peroxisome, plasma membrane, vacuole 34.17 26.82
CDX67772 Canola plasma membrane 34.17 26.82
CDY21076 Canola cytosol, peroxisome, plasma membrane 34.92 26.78
CDY26602 Canola cytosol, peroxisome, vacuole 34.92 26.78
CDY64820 Canola plasma membrane 34.42 26.25
CDX94064 Canola plasma membrane 27.14 26.09
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 35.43 25.97
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 34.92 25.6
CDX98713 Canola plasma membrane 28.64 25.05
CDX84047 Canola plasma membrane 43.47 24.57
CDX92726 Canola nucleus, peroxisome, plasma membrane 35.93 23.91
CDY50190 Canola nucleus, peroxisome, plasma membrane 35.68 23.55
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 10.8 23.37
CDY33131 Canola golgi, plasma membrane, vacuole 9.8 22.16
CDX69836 Canola plasma membrane 41.71 16.18
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078HNR3UniProt:A0A078HNR3EnsemblPlants:CDY38453ProteinID:CDY38453ProteinID:CDY38453.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00065896001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF154TMHMM:TMhelixUniParc:UPI0004EF3E00
SEG:seg:::::
Description
BnaA10g17050DBnaA10g17050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNR3]
Coordinates
chrLK032424:-:98826..102430
Molecular Weight (calculated)
43975.4 Da
IEP (calculated)
5.646
GRAVY (calculated)
0.700
Length
398 amino acids
Sequence
(BLAST)
001: MSRGGGEMEE RLLNASETEQ RRESLYLRKK IWSEVRKMWR IALPSTLFRV MSFGCIVVAQ AFIGHSSETG LAAYALIQST FIRFIYGVMA GMSSATETLC
101: GQAYGAQQYH MMGIYLQRSW MVDTFTATLF VPFIIFAGPI LRLLGQNIEI TKTVDEIYPW VIPYLYSIVF TMTMQMYLQA QMKNAIIGVL STVALVVDIV
201: ATWWCVSVMG MGIHGALLGL NISSWTVVIA EFVYVFGGWC PHTWTGFSTA AFVDLFPMLK LSISSGFMLC LEYWYMSIIV LMSGYTEDAN IAISAFSICQ
301: YIYTWEMNIS LGLLGAACVR VANELGKGDA DAVRFSIKVV LVVSAVIGVL CSVLCLAFGG QISYLFSDSH QVSDAVADLS IVLSLSILLN IVQPILSG
Best Arabidopsis Sequence Match ( AT5G17700.3 )
(BLAST)
001: MSGGGGEMEE RLLNGSETEQ RRESLYLRKK IWSEVRKMWR IALPSTLFRV MSFGCVVVAQ AFIGHSSETG LAAYALLQST FIRFIYGIMA GMSSATETLC
101: GQAYGAEQYH MMGIYLQRSW IVDTFIATLF VPFIVLAGPI LRLLGQNVVI SETVDEIYPW VIPYLYSIVF TMTMQMYLQA QMKNAIIGIL STLALVLDIA
201: ATWWCVSVMG MGIHGALLGL NISSWSVAIA EFVYVFGGWC PHTWTGFSTA AFLDLIPMLK LSISSGFMLC LEYWYMSIIV LMSGYAKDAN IAISAFSICQ
301: YIYSWEMNIC FGLMGAACVR VANELGKGDA DAVRFSIKVV LVVSAVIGVI CSALCLAFGG QISYLFSDSQ AVSDAVADLS IVLSISILFN IIQPILSGYK
401: IKPLY
Arabidopsis Description
DTX25Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UJQ3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.