Factsheet for VIT_08s0056g01040.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
vacuole 2
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0056g01120.t01	Wine grape	plasma membrane	69.69	55.46
VIT_08s0056g01000.t01	Wine grape	plasma membrane, vacuole	58.55	54.33
VIT_08s0056g01070.t01	Wine grape	plasma membrane	68.13	54.23
VIT_08s0056g01080.t01	Wine grape	plasma membrane	66.84	50.29
Solyc10g081260.1.1	Tomato	plasma membrane	62.18	49.48
PGSC0003DMT400072250	Potato	plasma membrane	61.14	48.66
CDY38453	Canola	plasma membrane	47.93	46.48
Bra013957.1-P	Field mustard	plasma membrane	54.92	42.66
Bra023633.1-P	Field mustard	plasma membrane	52.59	42.38
VIT_08s0056g00890.t01	Wine grape	plasma membrane	46.63	41.67
CDY51758	Canola	plasma membrane	53.37	41.28
Bra031982.1-P	Field mustard	plasma membrane	53.11	41.08
CDY50654	Canola	plasma membrane	52.85	40.88
AT5G17700.2	Thale cress	plasma membrane	52.33	40.64
AT3G03620.2	Thale cress	plasma membrane	52.33	40.4
CDY16896	Canola	plasma membrane	51.81	40.32
Bra036449.1-P	Field mustard	plasma membrane	51.55	39.96
CDY29945	Canola	plasma membrane	51.3	39.76
CDY21177	Canola	plasma membrane	51.3	39.76
VIT_08s0056g00780.t01	Wine grape	golgi, peroxisome, plasma membrane	49.22	38.38
VIT_08s0056g00870.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.6	36.14
VIT_18s0001g06790.t01	Wine grape	plasma membrane	44.82	35.31
VIT_18s0001g06820.t01	Wine grape	plasma membrane	41.45	33.06
VIT_18s0001g11760.t01	Wine grape	plasma membrane	38.86	31.32
VIT_16s0050g00910.t01	Wine grape	plasma membrane	39.64	31.29
VIT_00s0225g00060.t01	Wine grape	plasma membrane	41.45	31.25
VIT_16s0050g00900.t01	Wine grape	plasma membrane	39.38	31.08
VIT_16s0050g00930.t01	Wine grape	plasma membrane	39.64	31.03
VIT_00s0225g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.45	31.01
VIT_00s0225g00070.t01	Wine grape	plasma membrane	40.16	30.94
VIT_15s0046g01800.t01	Wine grape	plasma membrane	38.08	30.43
VIT_12s0059g02220.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	39.38	29.98
VIT_12s0059g02180.t01	Wine grape	cytosol, peroxisome, plasma membrane	38.86	29.59
VIT_00s0225g00050.t01	Wine grape	cytosol, peroxisome, plasma membrane	38.6	29.27
VIT_10s0116g01880.t01	Wine grape	plasma membrane	38.34	29.08
VIT_10s0116g01860.t01	Wine grape	plasma membrane	37.82	28.97
VIT_10s0116g01870.t01	Wine grape	plastid	38.08	28.82
VIT_12s0059g02160.t01	Wine grape	plasma membrane	37.82	28.35
VIT_12s0028g01150.t01	Wine grape	plasma membrane	34.97	26.79
VIT_12s0028g01160.t01	Wine grape	peroxisome, plasma membrane, vacuole	34.72	26.48
VIT_12s0059g02230.t01	Wine grape	cytosol, nucleus, plasma membrane	37.56	21.08

Protein Annotations

MapMan:24.2.4.1.1	EMBL:AM433351	ProteinID:CAN71596	ProteinID:CAN71596.1	ProteinID:CCB55987	ProteinID:CCB55987.1
UniProt:F6HMW2	EMBL:FN595995	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF154	TMHMM:TMhelix
UniParc:UPI000210852F	ArrayExpress:VIT_08s0056g01040	EnsemblPlantsGene:VIT_08s0056g01040	EnsemblPlants:VIT_08s0056g01040.t01	SEG:seg	:

Description

No Description!

Coordinates

chr8:-:1508051..1531663

Molecular Weight (calculated)

43068.5 Da

IEP (calculated)

9.792

GRAVY (calculated)

0.538

Length

386 amino acids

Sequence
(BLAST)

001: MDSDNEERLQ SSEVEGKNAL KGRIWEESKK TLRIAFPTML FRVASFGMAV VTQLFVGHFG QIELAAYALI QTILVLFVSG VLQGMSSATE TLCGQAFGAK
101: QYHTMGIYLQ RTWIVNLIAA KIMLPLFIFA TPIFRLLGQA EEISTVAGKI SLWFIPYVYY LLFSRTIQRY LQAQLKNMVI GWLSAFSFVF HVLLSWIFVS
201: KLKLGIPGAM SALNISSWLV VISQFVYVLG GWCPETWKGF TTAAFANLLP VIKLSISSGV MLCLELWYGA IILLLAGYLK NATVAIAAFS ICLNISAWAL
301: MFFLGFLGAV CVRVSNELGK GNARAAKFAV KGMWIGMLCG VAMQSLVLFY LTWRTNWDEQ VRKTAERLNK WSLKPPEEPN QNPPQA

Best Arabidopsis Sequence Match ( AT5G17700.3 )
(BLAST)

001: MSGGGGEMEE RLLNGSETEQ RRESLYLRKK IWSEVRKMWR IALPSTLFRV MSFGCVVVAQ AFIGHSSETG LAAYALLQST FIRFIYGIMA GMSSATETLC
101: GQAYGAEQYH MMGIYLQRSW IVDTFIATLF VPFIVLAGPI LRLLGQNVVI SETVDEIYPW VIPYLYSIVF TMTMQMYLQA QMKNAIIGIL STLALVLDIA
201: ATWWCVSVMG MGIHGALLGL NISSWSVAIA EFVYVFGGWC PHTWTGFSTA AFLDLIPMLK LSISSGFMLC LEYWYMSIIV LMSGYAKDAN IAISAFSICQ
301: YIYSWEMNIC FGLMGAACVR VANELGKGDA DAVRFSIKVV LVVSAVIGVI CSALCLAFGG QISYLFSDSQ AVSDAVADLS IVLSISILFN IIQPILSGYK
401: IKPLY

Arabidopsis Description

DTX25Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UJQ3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.