Factsheet for VIT_08s0056g01080.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
plasma membrane 6
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0056g01070.t01	Wine grape	plasma membrane	71.54	75.67
VIT_08s0056g01120.t01	Wine grape	plasma membrane	67.84	71.75
VIT_08s0056g01000.t01	Wine grape	plasma membrane, vacuole	54.39	67.07
VIT_08s0056g01040.t01	Wine grape	golgi, peroxisome, plasma membrane	50.29	66.84
Solyc10g081260.1.1	Tomato	plasma membrane	57.31	60.62
PGSC0003DMT400072250	Potato	plasma membrane	57.12	60.41
CDY38453	Canola	plasma membrane	42.69	55.03
CDY51758	Canola	plasma membrane	51.07	52.51
Bra013957.1-P	Field mustard	plasma membrane	50.68	52.31
Bra031982.1-P	Field mustard	plasma membrane	50.88	52.3
Bra023633.1-P	Field mustard	plasma membrane	48.73	52.19
CDY21177	Canola	plasma membrane	50.49	52.01
CDY50654	Canola	plasma membrane	50.49	51.9
Bra036449.1-P	Field mustard	plasma membrane	50.29	51.81
CDY29945	Canola	plasma membrane	50.29	51.81
AT3G03620.2	Thale cress	plasma membrane	50.1	51.4
AT5G17700.2	Thale cress	plasma membrane	49.71	51.31
VIT_08s0056g00890.t01	Wine grape	plasma membrane	42.11	50.0
VIT_08s0056g00780.t01	Wine grape	golgi, peroxisome, plasma membrane	46.59	48.28
CDY16896	Canola	plasma membrane	45.81	47.38
VIT_18s0001g06790.t01	Wine grape	plasma membrane	42.88	44.9
VIT_08s0056g00870.t01	Wine grape	cytosol, peroxisome, plasma membrane	41.13	43.33
VIT_18s0001g06820.t01	Wine grape	plasma membrane	40.74	43.18
VIT_16s0050g00910.t01	Wine grape	plasma membrane	37.82	39.67
VIT_16s0050g00930.t01	Wine grape	plasma membrane	38.01	39.55
VIT_00s0225g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	39.18	38.95
VIT_16s0050g00900.t01	Wine grape	plasma membrane	37.04	38.85
VIT_18s0001g11760.t01	Wine grape	plasma membrane	35.87	38.41
VIT_15s0046g01800.t01	Wine grape	plasma membrane	36.06	38.3
VIT_00s0225g00060.t01	Wine grape	plasma membrane	38.01	38.09
VIT_12s0059g02180.t01	Wine grape	cytosol, peroxisome, plasma membrane	37.62	38.07
VIT_12s0059g02220.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	37.43	37.87
VIT_10s0116g01860.t01	Wine grape	plasma membrane	36.65	37.3
VIT_10s0116g01880.t01	Wine grape	plasma membrane	36.84	37.13
VIT_00s0225g00050.t01	Wine grape	cytosol, peroxisome, plasma membrane	36.84	37.13
VIT_00s0225g00070.t01	Wine grape	plasma membrane	36.26	37.13
VIT_12s0059g02160.t01	Wine grape	plasma membrane	37.23	37.09
VIT_10s0116g01870.t01	Wine grape	plastid	36.45	36.67
VIT_12s0028g01150.t01	Wine grape	plasma membrane	34.31	34.92
VIT_12s0028g01160.t01	Wine grape	peroxisome, plasma membrane, vacuole	33.14	33.6
VIT_12s0059g02230.t01	Wine grape	cytosol, nucleus, plasma membrane	37.82	28.2

Protein Annotations

EntrezGene:100241535	wikigene:100241535	MapMan:24.2.4.1.1	ProteinID:CCB55991	ProteinID:CCB55991.1	UniProt:F6HMW6
EMBL:FN595995	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EntrezGene:LOC100241535	wikigene:LOC100241535	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF154
TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002108531	ArrayExpress:VIT_08s0056g01080	EnsemblPlantsGene:VIT_08s0056g01080	EnsemblPlants:VIT_08s0056g01080.t01
RefSeq:XP_002268005	RefSeq:XP_002268005.1	SEG:seg	:	:	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6HMW6]

Coordinates

chr8:+:1571972..1580990

Molecular Weight (calculated)

56574.5 Da

IEP (calculated)

8.032

GRAVY (calculated)

0.710

Length

513 amino acids

Sequence
(BLAST)

001: MKESNMKKLT LQLLVTIIYI VKSGKKKGIM DNNMEERLLG SETEGPTDLK WRIWEESKKA WRITFPAMLS RITAFGMLVV TQAFIGHISQ LDLSAFALTQ
101: TILVRFCNGI LVGMSSATET LCGQAFGAKQ YHMMGIYLQR SWLVDVTMAT IMAPLFIFAT SIFKLLGQED DIAIAVRSFS LWFLPFLYYL VFSMTLQMFL
201: QAQLKNMIVA WVSAASFVLH VLLSWLFVIK LNLGIPGAMS ALTISSWSMV IGESVYVFGG WCPKTWRGLS SAAFTDILPV IKLSVSSGFM LCLELWYNAV
301: VLLVAGYLKD ASIAISAFSI CININTWELM LCLGFVGASC VRVANELGRG NAKAAIFSIK VILCNSILIG VIFWVLCLVF GHDIAYLFTS DEEVITMVSS
401: LSVLLSFSIL LNSVQPVLIG VAIGAGWQGA VGIVNVGCYY VVGIPIGALL AYVADLSVRG MWIGVLCGIG MQTLVLTIMT WRTNWDEQVK KTSDHLNKWL
501: LESSESNQNS PQA

Best Arabidopsis Sequence Match ( AT5G17700.1 )
(BLAST)

001: MSGGGGEMEE RLLNGSETEQ RRESLYLRKK IWSEVRKMWR IALPSTLFRV MSFGCVVVAQ AFIGHSSETG LAAYALLQST FIRFIYGIMA GMSSATETLC
101: GQAYGAEQYH MMGIYLQRSW IVDTFIATLF VPFIVLAGPI LRLLGQNVVI SETVDEIYPW VIPYLYSIVF TMTMQMYLQA QMKNAIIGIL STLALVLDIA
201: ATWWCVSVMG MGIHGALLGL NISSWSVAIA EFVYVFGGWC PHTWTGFSTA AFLDLIPMLK LSISSGFMLC LEYWYMSIIV LMSGYAKDAN IAISAFSICQ
301: YIYSWEMNIC FGLMGAACVR VANELGKGDA DAVRFSIKVV LVVSAVIGVI CSALCLAFGG QISYLFSDSQ AVSDAVADLS IVLSISILFN IIQPILSGVA
401: IGAGMQSMVA LVNLASYYAI GVPLGVLLVY VFNFGIKGLW SGMLAGVGIQ TLILCYVIYK TDWELEVKKT NERMKTWTLN LPAVQSTTIS TRDEERK

Arabidopsis Description

DTX25Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UJQ3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.