Factsheet for VIT_08s0056g01120.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0056g01070.t01	Wine grape	plasma membrane	73.2	73.2
VIT_08s0056g01040.t01	Wine grape	golgi, peroxisome, plasma membrane	55.46	69.69
VIT_08s0056g01000.t01	Wine grape	plasma membrane, vacuole	59.59	69.47
VIT_08s0056g01080.t01	Wine grape	plasma membrane	71.75	67.84
Solyc10g081260.1.1	Tomato	plasma membrane	63.92	63.92
PGSC0003DMT400072250	Potato	plasma membrane	63.51	63.51
CDY38453	Canola	plasma membrane	46.19	56.28
Bra023633.1-P	Field mustard	plasma membrane	54.64	55.32
VIT_08s0056g00890.t01	Wine grape	plasma membrane	49.07	55.09
CDY51758	Canola	plasma membrane	56.29	54.71
Bra031982.1-P	Field mustard	plasma membrane	56.08	54.51
AT3G03620.2	Thale cress	plasma membrane	56.08	54.4
Bra013957.1-P	Field mustard	plasma membrane	55.67	54.33
CDY50654	Canola	plasma membrane	55.67	54.11
AT5G17700.2	Thale cress	plasma membrane	55.26	53.92
CDY29945	Canola	plasma membrane	54.85	53.41
Bra036449.1-P	Field mustard	plasma membrane	54.85	53.41
CDY21177	Canola	plasma membrane	54.64	53.21
VIT_08s0056g00780.t01	Wine grape	golgi, peroxisome, plasma membrane	51.13	50.1
CDY16896	Canola	plasma membrane	50.93	49.8
VIT_18s0001g06790.t01	Wine grape	plasma membrane	47.63	47.14
VIT_18s0001g06820.t01	Wine grape	plasma membrane	44.33	44.42
VIT_08s0056g00870.t01	Wine grape	cytosol, peroxisome, plasma membrane	44.33	44.15
VIT_00s0225g00080.t01	Wine grape	cytosol, peroxisome, plasma membrane	45.15	42.44
VIT_00s0225g00060.t01	Wine grape	plasma membrane	43.51	41.21
VIT_16s0050g00930.t01	Wine grape	plasma membrane	41.86	41.18
VIT_18s0001g11760.t01	Wine grape	plasma membrane	40.41	40.92
VIT_16s0050g00910.t01	Wine grape	plasma membrane	40.62	40.29
VIT_00s0225g00050.t01	Wine grape	cytosol, peroxisome, plasma membrane	42.06	40.08
VIT_00s0225g00070.t01	Wine grape	plasma membrane	41.24	39.92
VIT_10s0116g01860.t01	Wine grape	plasma membrane	40.41	38.89
VIT_16s0050g00900.t01	Wine grape	plasma membrane	39.18	38.85
VIT_12s0059g02220.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	40.21	38.46
VIT_12s0059g02180.t01	Wine grape	cytosol, peroxisome, plasma membrane	39.79	38.07
VIT_10s0116g01870.t01	Wine grape	plastid	39.79	37.84
VIT_10s0116g01880.t01	Wine grape	plasma membrane	39.59	37.72
VIT_12s0059g02160.t01	Wine grape	plasma membrane	39.59	37.28
VIT_15s0046g01800.t01	Wine grape	plasma membrane	36.49	36.65
VIT_12s0028g01150.t01	Wine grape	plasma membrane	37.94	36.51
VIT_12s0028g01160.t01	Wine grape	peroxisome, plasma membrane, vacuole	36.08	34.59
VIT_12s0059g02230.t01	Wine grape	cytosol, nucleus, plasma membrane	38.35	27.03

Protein Annotations

EntrezGene:100265386	wikigene:100265386	MapMan:24.2.4.1.1	ProteinID:CCB55994	ProteinID:CCB55994.1	UniProt:F6HMW9
EMBL:FN595995	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EntrezGene:LOC100265386	wikigene:LOC100265386	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF154
TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002108534	ArrayExpress:VIT_08s0056g01120	EnsemblPlantsGene:VIT_08s0056g01120	EnsemblPlants:VIT_08s0056g01120.t01
RefSeq:XP_002268350	RefSeq:XP_002268350.2	RefSeq:XP_010653169.1	SEG:seg	:	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6HMW9]

Coordinates

chr8:+:1699123..1718463

Molecular Weight (calculated)

54045.8 Da

IEP (calculated)

7.961

GRAVY (calculated)

0.638

Length

485 amino acids

Sequence
(BLAST)

001: MDNNIEERLL GSEAEGERDL RAKIWEESKM TWRIAFPSIL FRVTSFGTLV VTQVFIGRIS QLDLAAYALV QTILIRFVNG ILVGMSSATE TLCGQAFGAK
101: QYHMLGIYLQ RSWIVDATTA TILTPLFIFS APIFKLLGQE EDIAIATENI SLWFLPYLYY MVFSRSIQMY LQAQLKNMIV GWLSTFSFVL HVFLSWIFVI
201: VLKFEIPGAM VALNISSWSM VIGAFVYVFG GWCPKTWRGF TTVAFTDLLP VVKLSISSGV MLCLQLWYYA ILLLLAGYLK NATVSISAFS ICLNINTWEM
301: MLTLGFLGAT SVRVSNELGR GNAKAAKFAI KYILCTSICI GVVFWILCLV FGHDIGYLFT SNEEVAETVS SLSVLLAFSI LLNSVQPVLS GVAIGAGWQS
401: KVAYINIGSY YIIGVPLGVL LGYVAHLSVK GMWSGMICGV VVQGMLLTYM IWKTDWDEQV RKASQRLNRW FLKPSEESNE GPSQA

Best Arabidopsis Sequence Match ( AT3G03620.2 )
(BLAST)

001: MSTQEEMEER LLREGSDAEG QSNNRESIYL RTKVWSEVNK MWRIALPSSL FRMTSFGSII VAQAFIGHSS ELGLAAYALL QSTFIRFLYG LMGGMSSATE
101: TLCGQAYGAE QYHTMGIYLQ RSWIVDMAVT TLFLPFIVLA GPILRLLGQN VEITKTVDEI YPWMIPYVYS LIFTMTIQMY LQAQMRNAIV GVLSTLSLAL
201: DLVVTWWCVS VMGMGIGGAL LGLNVGSWAM VLAEFVYIFG GWCPFTWTGF SIAAFVDLIP MLKLSISSGF MICLEYWYMS ILVLMAGYTK DAKIAISAFS
301: ICQYIYTWEL NICLGFLGAA CVRVANELGK GDAHAVRFSI KVILTISTLM GVIFSALCLA FCGRISYLFS NSDEVSDAVN DLSVILAVSI LLNSIQPILS
401: GVAVGAGMQS IVAVVNLASY YAIGIPLGLI LTYVFHLGVK GLWSGMLAGI AIQTIILCYI IYKTDWELEV KRTCERMKVW SLKPSNEESN PIIREESRSK

Arabidopsis Description

DTX24Protein DETOXIFICATION 24 [Source:UniProtKB/Swiss-Prot;Acc:F4J158]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.