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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38453 Canola plasma membrane 78.02 97.24
Bra013957.1-P Field mustard plasma membrane 90.12 89.94
AT5G17700.2 Thale cress plasma membrane 81.25 81.09
CDY51758 Canola plasma membrane 68.35 67.94
CDY50654 Canola plasma membrane 68.35 67.94
CDY21177 Canola plasma membrane 66.53 66.27
CDY29945 Canola plasma membrane 66.13 65.86
VIT_08s0056g01040.t01 Wine grape golgi, peroxisome, plasma membrane 40.32 51.81
VIT_08s0056g01120.t01 Wine grape plasma membrane 49.8 50.93
VIT_08s0056g01070.t01 Wine grape plasma membrane 48.99 50.1
PGSC0003DMT400072250 Potato plasma membrane 48.39 49.48
Solyc10g081260.1.1 Tomato plasma membrane 48.19 49.28
VIT_08s0056g01000.t01 Wine grape plasma membrane, vacuole 38.91 46.39
VIT_08s0056g01080.t01 Wine grape plasma membrane 47.38 45.81
CDY01224 Canola plasma membrane 27.22 40.06
CDY44967 Canola plasma membrane 32.46 40.05
CDX93794 Canola plasma membrane 39.11 39.35
CDY70471 Canola cytosol, peroxisome, plasma membrane 23.59 38.61
CDY33962 Canola plasma membrane 24.19 37.5
CDX78379 Canola peroxisome, plasma membrane, vacuole 34.68 37.23
CDX69834 Canola plasma membrane 35.69 37.18
CDX97001 Canola plasma membrane 36.49 36.86
CDX85764 Canola plasma membrane 37.1 36.8
CDX81281 Canola plasma membrane 35.89 36.78
CDY08798 Canola cytosol, peroxisome, plasma membrane 23.79 36.76
CDX69835 Canola plasma membrane 36.09 36.76
CDX97005 Canola plasma membrane 35.89 36.55
CDY14558 Canola plasma membrane 23.59 36.34
CDX81176 Canola plasma membrane 35.69 36.27
CDY40093 Canola plasma membrane 36.69 36.26
CDX78378 Canola plasma membrane 35.08 35.88
CDY40095 Canola plasma membrane 35.08 35.73
CDX81172 Canola plasma membrane 34.88 35.67
CDX81174 Canola plasma membrane 28.02 34.24
CDY69153 Canola cytosol, peroxisome, plasma membrane 21.77 34.07
CDY24250 Canola cytosol, peroxisome, plasma membrane 21.77 34.07
CDY33130 Canola cytosol, peroxisome, vacuole 20.97 33.77
CDY07257 Canola endoplasmic reticulum, vacuole 21.98 33.33
CDX98712 Canola plasma membrane 33.87 33.14
CDX94063 Canola plasma membrane 33.67 32.94
CDY17070 Canola cytosol, peroxisome, plasma membrane 32.06 32.85
CDY06731 Canola cytosol, peroxisome, plasma membrane 32.06 32.85
CDY38631 Canola cytosol, peroxisome, vacuole 33.87 32.81
CDX79109 Canola plasma membrane 32.86 32.8
CDX94432 Canola plasma membrane 33.67 32.68
CDX76391 Canola plasma membrane 33.06 32.67
CDY08796 Canola plasma membrane 35.69 32.66
CDX89406 Canola plasma membrane 33.67 32.62
CDY19295 Canola cytosol, peroxisome, plasma membrane 19.96 32.57
CDY27434 Canola plasma membrane 32.86 32.47
CDY61495 Canola plasma membrane 35.48 32.29
CDX92916 Canola cytosol, plasma membrane, vacuole 32.86 32.28
CDX98711 Canola peroxisome, plasma membrane, vacuole 32.86 32.15
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 11.9 32.07
CDX94064 Canola plasma membrane 26.61 31.88
CDX94061 Canola peroxisome, plasma membrane, vacuole 32.46 31.76
CDY27431 Canola plasma membrane 32.46 31.76
CDY19294 Canola cytosol, peroxisome, plasma membrane 32.86 31.71
CDY39494 Canola cytosol, peroxisome, plasma membrane 32.86 31.71
CDY34637 Canola plasma membrane 29.23 31.59
CDX83628 Canola plasma membrane 25.0 31.55
CDY54720 Canola plasma membrane 35.69 31.49
CDY33129 Canola cytosol, peroxisome, plasma membrane 32.06 31.49
CDY34833 Canola plasma membrane 29.03 31.37
CDY25329 Canola plasma membrane 31.65 31.34
CDY12916 Canola cytosol, plasma membrane, vacuole 31.65 31.34
CDY47166 Canola plasma membrane 31.65 31.34
CDY19507 Canola cytosol, plasma membrane, vacuole 31.65 31.34
CDY49481 Canola plasma membrane 27.42 31.12
CDY65669 Canola cytosol, peroxisome, plasma membrane 31.05 31.11
CDX76392 Canola plasma membrane 28.83 31.02
CDY39493 Canola cytosol, peroxisome, plasma membrane 31.25 30.82
CDX83627 Canola cytosol, peroxisome, plasma membrane 31.25 30.82
CDY33131 Canola golgi, plasma membrane, vacuole 10.89 30.68
CDY13643 Canola cytosol, peroxisome, plasma membrane 31.05 30.62
CDX98713 Canola plasma membrane 28.02 30.55
CDY64933 Canola plasma membrane 31.05 30.5
CDY08797 Canola plasma membrane 34.68 30.44
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 32.86 30.02
CDX67772 Canola plasma membrane 30.44 29.78
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 32.46 29.65
CDY16041 Canola cytosol, peroxisome, vacuole 30.85 29.48
CDY34598 Canola cytosol, peroxisome, vacuole 30.85 29.48
CDX98344 Canola plasma membrane 30.04 29.39
CDY26602 Canola cytosol, peroxisome, vacuole 30.65 29.29
CDY21076 Canola cytosol, peroxisome, plasma membrane 30.65 29.29
CDY64820 Canola plasma membrane 29.03 27.59
CDX92726 Canola nucleus, peroxisome, plasma membrane 32.66 27.09
CDY50190 Canola nucleus, peroxisome, plasma membrane 32.46 26.7
CDX84047 Canola plasma membrane 36.29 25.57
CDX69836 Canola plasma membrane 36.69 17.74
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078FVA2UniProt:A0A078FVA2EnsemblPlants:CDY16896ProteinID:CDY16896ProteinID:CDY16896.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00094805001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF154TMHMM:TMhelixUniParc:UPI0004EEED85
SEG:seg:::::
Description
BnaC09g40230DProtein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A078FVA2]
Coordinates
chrLK032068:+:201194..205730
Molecular Weight (calculated)
55798.8 Da
IEP (calculated)
7.348
GRAVY (calculated)
0.436
Length
496 amino acids
Sequence
(BLAST)
001: MSRGGGEMEE RLLNASETEQ RRESLYLRKK IWSEVRKMWR IALPSTLFRV MSFGCIVVAQ AFIGHSSETG LAAYALIQST FIRFIYGVMA GMSSATETLC
101: GQAYGAQQYH MMGIYLQRSW IVDTFTATLF VPFIIFAGPI LRLLGQNIEI TKTVDEIYPW VIPYLYSIVF TMTIQMYLQA QMKNAIIGVL STVALVVDIV
201: ATWWCVSVMG MGIHGALLGL NISSWTVVIA EFVYVFGGWC PHTWTGFSTA AFVDLFPMLK LSISSGFMLC LEYWYMSIIV LMSGYTEDAN IAISAFSICQ
301: YIYTWEMNIS LGLLVIMFYP ETNELGKGDA DAVRFSIKVV LVVSAVIGVL CSILCLAFGG QISYLFSDSH QVSDAVADLS IVLSLSILLN IVQPILSGYY
401: KIKKLTPSKK CVIKIYYYVS KRKGDILCIV TNDQKEDIHA ERVVGVGMQT LILSYVIYKT DWEMEVKKTN ERMKTWTLKS PSVEPSTITT RDEERK
Best Arabidopsis Sequence Match ( AT5G17700.1 )
(BLAST)
001: MSGGGGEMEE RLLNGSETEQ RRESLYLRKK IWSEVRKMWR IALPSTLFRV MSFGCVVVAQ AFIGHSSETG LAAYALLQST FIRFIYGIMA GMSSATETLC
101: GQAYGAEQYH MMGIYLQRSW IVDTFIATLF VPFIVLAGPI LRLLGQNVVI SETVDEIYPW VIPYLYSIVF TMTMQMYLQA QMKNAIIGIL STLALVLDIA
201: ATWWCVSVMG MGIHGALLGL NISSWSVAIA EFVYVFGGWC PHTWTGFSTA AFLDLIPMLK LSISSGFMLC LEYWYMSIIV LMSGYAKDAN IAISAFSICQ
301: YIYSWEMNIC FGLMGAACVR VANELGKGDA DAVRFSIKVV LVVSAVIGVI CSALCLAFGG QISYLFSDSQ AVSDAVADLS IVLSISILFN IIQPILSGVA
401: IGAGMQSMVA LVNLASYYAI GVPLGVLLVY VFNFGIKGLW SGMLAGVGIQ TLILCYVIYK TDWELEVKKT NERMKTWTLN LPAVQSTTIS TRDEERK
Arabidopsis Description
DTX25Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UJQ3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.