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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, peroxisome, vacuole

Predictor Summary:
  • nucleus 1
  • vacuole 2
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plasma membrane, vacuole
Any Predictor:nucleus, peroxisome, plasma membrane, vacuole
BaCelLo:nucleus
MultiLoc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038749.1-P Field mustard peroxisome, plasma membrane, vacuole 99.21 99.21
CDX94061 Canola peroxisome, plasma membrane, vacuole 96.84 96.84
CDX98712 Canola plasma membrane 85.6 85.6
CDX79109 Canola plasma membrane 83.83 85.51
CDX76391 Canola plasma membrane 84.62 85.46
CDY27434 Canola plasma membrane 84.42 85.26
CDX94063 Canola plasma membrane 85.01 85.01
AT4G21910.4 Thale cress plasma membrane 84.02 83.69
CDX98713 Canola plasma membrane 74.56 83.08
CDY27431 Canola plasma membrane 81.26 81.26
CDX76392 Canola plasma membrane 72.78 80.04
CDX94064 Canola plasma membrane 64.1 78.5
AT4G21903.2 Thale cress plasma membrane 79.88 78.34
CDY07257 Canola endoplasmic reticulum, vacuole 41.81 64.83
CDY64933 Canola plasma membrane 63.71 63.96
CDY33131 Canola golgi, plasma membrane, vacuole 22.09 63.64
CDY34637 Canola plasma membrane 57.0 62.96
CDY25329 Canola plasma membrane 62.13 62.87
CDY19507 Canola cytosol, plasma membrane, vacuole 62.13 62.87
CDY12916 Canola cytosol, plasma membrane, vacuole 62.13 62.87
CDY47166 Canola plasma membrane 61.93 62.67
CDY34833 Canola plasma membrane 56.61 62.53
VIT_10s0116g01880.t01 Wine grape plasma membrane 62.72 62.48
VIT_10s0116g01870.t01 Wine grape plastid 61.34 60.98
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 59.37 60.32
KRH11419 Soybean plasma membrane 58.19 58.42
CDY33129 Canola cytosol, peroxisome, plasma membrane 57.4 57.62
CDX92916 Canola cytosol, plasma membrane, vacuole 57.2 57.43
CDY39493 Canola cytosol, peroxisome, plasma membrane 56.61 57.06
CDY38631 Canola cytosol, peroxisome, vacuole 57.59 57.03
CDY64820 Canola plasma membrane 58.58 56.9
CDY65669 Canola cytosol, peroxisome, plasma membrane 55.42 56.77
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 58.97 56.63
CDY19294 Canola cytosol, peroxisome, plasma membrane 57.2 56.42
CDY39494 Canola cytosol, peroxisome, plasma membrane 57.2 56.42
CDY69153 Canola cytosol, peroxisome, plasma membrane 34.52 55.2
CDY33130 Canola cytosol, peroxisome, vacuole 33.53 55.19
CDY24250 Canola cytosol, peroxisome, plasma membrane 33.92 54.26
CDY19295 Canola cytosol, peroxisome, plasma membrane 30.97 51.64
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 17.16 47.28
CDY01224 Canola plasma membrane 29.39 44.21
CDX69834 Canola plasma membrane 41.22 43.91
CDX67772 Canola plasma membrane 43.79 43.79
CDX98344 Canola plasma membrane 43.79 43.79
CDX83628 Canola plasma membrane 33.92 43.77
CDX97005 Canola plasma membrane 42.01 43.74
CDX78379 Canola peroxisome, plasma membrane, vacuole 39.25 43.07
CDX81176 Canola plasma membrane 41.42 43.03
CDY06731 Canola cytosol, peroxisome, plasma membrane 41.03 42.98
CDY13643 Canola cytosol, peroxisome, plasma membrane 42.6 42.94
CDX69835 Canola plasma membrane 41.22 42.92
CDY34598 Canola cytosol, peroxisome, vacuole 43.79 42.77
CDY17070 Canola cytosol, peroxisome, plasma membrane 40.83 42.77
CDY26602 Canola cytosol, peroxisome, vacuole 43.59 42.58
CDX83627 Canola cytosol, peroxisome, plasma membrane 42.21 42.54
CDY16041 Canola cytosol, peroxisome, vacuole 43.39 42.39
CDY44967 Canola plasma membrane 33.53 42.29
CDX85764 Canola plasma membrane 41.62 42.2
CDY21076 Canola cytosol, peroxisome, plasma membrane 43.2 42.2
CDY40095 Canola plasma membrane 40.24 41.89
CDX81172 Canola plasma membrane 40.04 41.86
CDX97001 Canola plasma membrane 40.43 41.75
CDX81281 Canola plasma membrane 39.84 41.74
CDY40093 Canola plasma membrane 41.03 41.43
CDX78378 Canola plasma membrane 39.45 41.24
CDX93794 Canola plasma membrane 39.05 40.16
CDX94432 Canola plasma membrane 40.43 40.12
CDX89406 Canola plasma membrane 40.43 40.04
CDX81174 Canola plasma membrane 31.95 39.9
CDY08798 Canola cytosol, peroxisome, plasma membrane 24.65 38.94
CDY14558 Canola plasma membrane 24.65 38.82
CDY33962 Canola plasma membrane 24.46 38.75
CDY49481 Canola plasma membrane 33.14 38.44
CDY08796 Canola plasma membrane 41.03 38.38
CDY70471 Canola cytosol, peroxisome, plasma membrane 22.88 38.28
CDY61495 Canola plasma membrane 40.83 37.98
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 40.24 37.57
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 40.04 37.38
CDY51758 Canola plasma membrane 36.49 37.07
CDY29945 Canola plasma membrane 36.29 36.95
CDY50654 Canola plasma membrane 36.29 36.87
CDY21177 Canola plasma membrane 36.09 36.75
CDY54720 Canola plasma membrane 40.24 36.3
CDY08797 Canola plasma membrane 39.45 35.4
CDY38453 Canola plasma membrane 27.22 34.67
CDX92726 Canola nucleus, peroxisome, plasma membrane 39.25 33.28
CDY50190 Canola nucleus, peroxisome, plasma membrane 39.25 33.0
CDY16896 Canola plasma membrane 32.15 32.86
CDX84047 Canola plasma membrane 36.69 26.42
CDX69836 Canola plasma membrane 40.04 19.79
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078EC14EnsemblPlants:CDX98711ProteinID:CDX98711ProteinID:CDX98711.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00106778001InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF140TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EE0B49SEG:seg
Description
BnaA03g44960D
Coordinates
chrLK031906:-:792306..795780
Molecular Weight (calculated)
55811.0 Da
IEP (calculated)
7.963
GRAVY (calculated)
0.591
Length
507 amino acids
Sequence
(BLAST)
001: MDRSIETAER TLRQPLVDPT DSERKPLRDV ESLESILTES SLPSRRRLYL GARIEMKLLF RLALPAILVY LLNSGMSIST RIFAGHIGSQ ELAAVSIGNS
101: CFNLVYGLML GMGSAVETLC GQAYGAHRYE MLGIYLQRAT IVLALVGLPM TVLYTFSYPI LILLGEPKTV SYMASLYIVG LIPQIFAFAV NFTAQKFLQA
201: QSVVTPSAYI SGAALLLQIL LTWTTVYVID LGLMGIAYVL TISWWFIVMS QTLYIITSPT FRHTWTGLSW RSFHGLWSFF KLSAGSAVMI CLEMWYSQIL
301: VLLAGLLNDH ALSLDSLSIC MSISGLSFMV SVGLNAAVSV RTSNELGAGN PKSAMFSSWM ATFVSFVISL AEALALMASR DYIGYIFTSD AEVAKAVSEL
401: CPFLAVTILL NGIQPVLSGV AVGCGWQTFV AYVNVGCYYV VGIPIGCVLG FTFNLQAKGI WTGMIGGTLM QTLILLYVTY RTDWDKEVKK ARKRLDMWDD
501: KKEPLLN
Best Arabidopsis Sequence Match ( AT4G21910.3 )
(BLAST)
001: MDVSNETVER TDLRTPLVDP ADTEVKPLPE VGLESVLTES SLSYRRRVYL GACIELKVLF RLALPAILIY LVNSGMGISA RVFAGHVGSQ ELAAASIGNS
101: CFNLVYGLML GMGSAVETLC GQAYGAHRYE MLGIYLQRAT IVLALVGLPM TLLYTFSYPI LILLGEPKTV SYMGSKYIAG LIPQIFAYAV NFTAQKFLQA
201: QSVVAPSAFI SAAALILQIL LTWITVYVMD MGFMGIAYVL TISWWVIVGS QCFYIAVSPK FRHTWTGLSW RSLQGLWSFF KLSAGSAVMI CLEMWYSQIL
301: VLLAGLLENP ARSLDSLSIC MSISALSFMV SVGFNAAVSV RTSNELGAGN PKSAWFSTWT ATFVSFVISV TEALAVIWFR DYVSYIFTED ADVAKAVSDL
401: CPFLAITIIL NGIQPVLSGV AVGCGWQTYV AYVNVGCYYV VGIPVGCILG FTFDFQAKGI WTGMIGGTLM QTLILLYVTY RTDWDKEVEK ARKRLDLWDD
501: KKEPLQN
Arabidopsis Description
MATE efflux family protein [Source:TAIR;Acc:AT4G21910]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.