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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 4
  • extracellular 3
  • vacuole 4
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, vacuole
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:plastid
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47166 Canola plasma membrane 96.64 63.07
CDY25329 Canola plasma membrane 96.02 62.67
CDY33131 Canola golgi, plasma membrane, vacuole 33.64 62.5
CDY19507 Canola cytosol, plasma membrane, vacuole 94.19 61.48
CDY12916 Canola cytosol, plasma membrane, vacuole 93.88 61.28
AT1G61890.1 Thale cress plasma membrane 92.66 60.48
CDY64933 Canola plasma membrane 83.79 54.26
CDY34833 Canola plasma membrane 72.78 51.85
CDY34637 Canola plasma membrane 71.56 50.98
CDX94064 Canola plasma membrane 62.69 49.52
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 27.22 48.37
CDY64820 Canola plasma membrane 75.54 47.32
VIT_10s0116g01880.t01 Wine grape plasma membrane 71.56 45.97
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 69.42 45.49
VIT_10s0116g01870.t01 Wine grape plastid 70.64 45.29
CDX76391 Canola plasma membrane 67.89 44.22
CDX79109 Canola plasma membrane 66.67 43.86
CDY27434 Canola plasma membrane 67.28 43.82
CDY65669 Canola cytosol, peroxisome, plasma membrane 64.22 42.42
CDY39493 Canola cytosol, peroxisome, plasma membrane 65.14 42.35
CDX98712 Canola plasma membrane 65.44 42.21
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 67.89 42.05
CDX92916 Canola cytosol, plasma membrane, vacuole 64.83 41.98
CDX98711 Canola peroxisome, plasma membrane, vacuole 64.83 41.81
CDX94063 Canola plasma membrane 64.83 41.81
CDY33129 Canola cytosol, peroxisome, plasma membrane 64.53 41.78
CDX94061 Canola peroxisome, plasma membrane, vacuole 64.53 41.62
CDY38631 Canola cytosol, peroxisome, vacuole 64.83 41.41
CDY27431 Canola plasma membrane 63.61 41.03
CDY39494 Canola cytosol, peroxisome, plasma membrane 63.91 40.66
CDY19294 Canola cytosol, peroxisome, plasma membrane 63.61 40.47
KRH11419 Soybean plasma membrane 62.39 40.4
CDX98713 Canola plasma membrane 55.35 39.78
CDY01224 Canola plasma membrane 40.37 39.17
CDX76392 Canola plasma membrane 54.43 38.61
CDX83628 Canola plasma membrane 43.43 36.13
CDY44967 Canola plasma membrane 44.34 36.07
CDX98344 Canola plasma membrane 51.38 33.14
CDX78379 Canola peroxisome, plasma membrane, vacuole 46.79 33.12
CDY33130 Canola cytosol, peroxisome, vacuole 31.19 33.12
CDX67772 Canola plasma membrane 50.46 32.54
CDY13643 Canola cytosol, peroxisome, plasma membrane 48.93 31.81
CDX83627 Canola cytosol, peroxisome, plasma membrane 48.93 31.81
CDY06731 Canola cytosol, peroxisome, plasma membrane 46.79 31.61
CDY21076 Canola cytosol, peroxisome, plasma membrane 50.15 31.6
CDY34598 Canola cytosol, peroxisome, vacuole 49.85 31.41
CDY16041 Canola cytosol, peroxisome, vacuole 49.85 31.41
CDY26602 Canola cytosol, peroxisome, vacuole 49.85 31.41
CDY17070 Canola cytosol, peroxisome, plasma membrane 46.48 31.41
CDY24250 Canola cytosol, peroxisome, plasma membrane 30.28 31.23
CDY69153 Canola cytosol, peroxisome, plasma membrane 30.28 31.23
CDX81174 Canola plasma membrane 38.23 30.79
CDX69834 Canola plasma membrane 44.65 30.67
CDX81176 Canola plasma membrane 45.57 30.53
CDX81172 Canola plasma membrane 45.26 30.52
CDX78378 Canola plasma membrane 44.95 30.31
CDX69835 Canola plasma membrane 44.95 30.18
CDX81281 Canola plasma membrane 44.65 30.17
CDY40095 Canola plasma membrane 44.65 29.98
CDX97005 Canola plasma membrane 44.34 29.77
CDX93794 Canola plasma membrane 44.34 29.41
CDX85764 Canola plasma membrane 44.95 29.4
CDX97001 Canola plasma membrane 44.04 29.33
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 48.01 28.91
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 48.01 28.91
CDX89406 Canola plasma membrane 45.26 28.91
CDY40093 Canola plasma membrane 44.34 28.88
CDX94432 Canola plasma membrane 44.65 28.57
CDY08796 Canola plasma membrane 45.87 27.68
CDY61495 Canola plasma membrane 45.57 27.34
CDY19295 Canola cytosol, peroxisome, plasma membrane 24.77 26.64
CDY21177 Canola plasma membrane 40.37 26.51
CDY51758 Canola plasma membrane 40.06 26.25
CDY54720 Canola plasma membrane 44.95 26.16
CDY29945 Canola plasma membrane 39.76 26.1
CDY49481 Canola plasma membrane 34.86 26.09
CDY50654 Canola plasma membrane 39.14 25.65
CDY08797 Canola plasma membrane 43.73 25.31
CDX92726 Canola nucleus, peroxisome, plasma membrane 44.95 24.58
CDY50190 Canola nucleus, peroxisome, plasma membrane 44.95 24.38
CDY38453 Canola plasma membrane 28.13 23.12
CDY16896 Canola plasma membrane 33.33 21.98
CDY33962 Canola plasma membrane 20.49 20.94
CDY08798 Canola cytosol, peroxisome, plasma membrane 20.49 20.87
CDY14558 Canola plasma membrane 20.49 20.81
CDX84047 Canola plasma membrane 40.67 18.89
CDY70471 Canola cytosol, peroxisome, plasma membrane 17.13 18.48
CDX69836 Canola plasma membrane 44.34 14.13
Protein Annotations
EnsemblPlants:CDY07257EnsemblPlantsGene:GSBRNA2T00124079001GO:A0A078F298GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF140PFAM:PF01554ProteinID:CDY07257
ProteinID:CDY07257.1TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EDFD69MapMan:24.2.4.1.1:
Description
BnaC04g19140D
Coordinates
chrLK031976:+:447486..450088
Molecular Weight (calculated)
35713.0 Da
IEP (calculated)
5.806
GRAVY (calculated)
0.796
Length
327 amino acids
Sequence
(BLAST)
001: MLPVIFVYAV NFPIQKFLQA QSIVTPSAYI SAAALVIHLV LSWTAVYRLG FGLLALSLIH SFSWWIIVAA QIVYIKMSPR CRRSWEGFSW KAFEGLWDFF
101: RLSAASAVML CLESWYSQIL VLLAGLLKDP EIALDSLAIC MSISAVSFMV SVGFNAAASV RVSNELGAGN PRAAAFSIVT TAVSFLLAVF EAVVVMSWRN
201: VISYAFTDSP VVAEAVADLS PFLAITIILN GIQPVLSGVA VGCGWQAFVA YVNIGCYYVV GIPIGFVLGF TYDMGAKGIW TGMIGGTLMQ TIILVVVTLK
301: TDWDKEVEKS SSRLDQWEES REPLLKQ
Best Arabidopsis Sequence Match ( AT1G11670.1 )
(BLAST)
001: MGSEATTAVN NLQQPLLEST KSEADFRMES VLTDTHLSYF RRIYLASLIE MKYLFHLAAP AIFVYVINNG MSMLTRIFAG RLGSMQLAAA SLGNSGFNMF
101: TLGLMLGMGS AVETLCGQAH GAHRYDMLGV YLQRSTIVLV ITGLPMTLLF IFSKPLLISL GEPADVASVA SVFVYGMIPM IFAYAVNFPI QKFLQSQSIV
201: TPSAYISAAT LVIHLILSWL SVFKFGWGLL GLSVVHSLSW WIIVLAQIIY IKISPRCRRT WDGFSWKAFD GLWDFFQLSA ASAVMLCLES WYSQILVLLA
301: GLLKDPELAL DSLAICMSIS AMSFMVSVGF NAAASVRVSN ELGAGNPRSA AFSTAVTTGV SFLLSLFEAI VILSWRHVIS YIFTDSPAVA EAVAELSPFL
401: AITIVLNGVQ PVLSGVAVGC GWQAYVAYVN IGCYYIVGIP IGYVLGFTYD MGARGIWTGM IGGTLMQTII LVIVTFRTDW DKEVEKASRR LDQWEDTSPL
501: LKQ
Arabidopsis Description
DTX36Protein DETOXIFICATION 36 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAB0]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.