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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra038747.1-P Field mustard plasma membrane 82.61 93.96
CDX98713 Canola plasma membrane 77.05 70.11
CDX76391 Canola plasma membrane 81.64 67.33
CDX79109 Canola plasma membrane 80.43 67.0
CDY27434 Canola plasma membrane 81.16 66.93
CDX94063 Canola plasma membrane 81.16 66.27
CDX98712 Canola plasma membrane 80.92 66.08
CDY27431 Canola plasma membrane 79.47 64.89
CDX76392 Canola plasma membrane 71.74 64.43
CDX98711 Canola peroxisome, plasma membrane, vacuole 78.5 64.1
CDX94061 Canola peroxisome, plasma membrane, vacuole 78.5 64.1
CDY07257 Canola endoplasmic reticulum, vacuole 49.52 62.69
CDY33131 Canola golgi, plasma membrane, vacuole 25.36 59.66
CDY64933 Canola plasma membrane 61.35 50.3
CDY47166 Canola plasma membrane 60.63 50.1
CDY25329 Canola plasma membrane 60.39 49.9
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 60.14 49.9
VIT_10s0116g01880.t01 Wine grape plasma membrane 60.87 49.51
CDY19507 Canola cytosol, plasma membrane, vacuole 59.66 49.3
CDY12916 Canola cytosol, plasma membrane, vacuole 59.42 49.1
CDY34833 Canola plasma membrane 53.86 48.58
CDY34637 Canola plasma membrane 53.62 48.37
VIT_10s0116g01870.t01 Wine grape plastid 59.42 48.24
CDY33129 Canola cytosol, peroxisome, plasma membrane 58.45 47.92
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 59.42 46.59
KRH11419 Soybean plasma membrane 56.52 46.34
CDX92916 Canola cytosol, plasma membrane, vacuole 56.28 46.14
CDY38631 Canola cytosol, peroxisome, vacuole 57.0 46.09
CDY65669 Canola cytosol, peroxisome, plasma membrane 54.83 45.86
CDY39493 Canola cytosol, peroxisome, plasma membrane 55.56 45.73
CDY19294 Canola cytosol, peroxisome, plasma membrane 56.76 45.72
CDY39494 Canola cytosol, peroxisome, plasma membrane 56.52 45.53
CDY64820 Canola plasma membrane 55.8 44.25
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 19.57 44.02
CDY01224 Canola plasma membrane 35.02 43.03
CDY44967 Canola plasma membrane 40.82 42.04
CDY33130 Canola cytosol, peroxisome, vacuole 30.92 41.56
CDX83628 Canola plasma membrane 37.92 39.95
CDY69153 Canola cytosol, peroxisome, plasma membrane 30.19 39.43
CDY24250 Canola cytosol, peroxisome, plasma membrane 29.95 39.12
CDY19295 Canola cytosol, peroxisome, plasma membrane 25.85 35.2
CDX97005 Canola plasma membrane 41.3 35.11
CDX78379 Canola peroxisome, plasma membrane, vacuole 39.13 35.06
CDX69835 Canola plasma membrane 41.06 34.91
CDY13643 Canola cytosol, peroxisome, plasma membrane 42.27 34.79
CDY06731 Canola cytosol, peroxisome, plasma membrane 40.58 34.71
CDX81281 Canola plasma membrane 40.58 34.71
CDX81172 Canola plasma membrane 40.58 34.64
CDX81176 Canola plasma membrane 40.82 34.63
CDY17070 Canola cytosol, peroxisome, plasma membrane 40.34 34.5
CDX69834 Canola plasma membrane 39.61 34.45
CDX83627 Canola cytosol, peroxisome, plasma membrane 41.79 34.39
CDX67772 Canola plasma membrane 42.03 34.32
CDX98344 Canola plasma membrane 42.03 34.32
CDX93794 Canola plasma membrane 40.82 34.28
CDY34598 Canola cytosol, peroxisome, vacuole 42.75 34.1
CDX78378 Canola plasma membrane 39.86 34.02
CDY26602 Canola cytosol, peroxisome, vacuole 42.51 33.91
CDY16041 Canola cytosol, peroxisome, vacuole 42.51 33.91
CDY40095 Canola plasma membrane 39.86 33.88
CDX85764 Canola plasma membrane 40.58 33.6
CDY21076 Canola cytosol, peroxisome, plasma membrane 42.03 33.53
CDY40093 Canola plasma membrane 40.34 33.27
CDX89406 Canola plasma membrane 41.06 33.2
CDX94432 Canola plasma membrane 40.58 32.88
CDY49481 Canola plasma membrane 34.06 32.27
CDX97001 Canola plasma membrane 37.92 31.98
CDX81174 Canola plasma membrane 30.92 31.53
CDY08796 Canola plasma membrane 40.58 31.0
CDY61495 Canola plasma membrane 40.58 30.83
CDY29945 Canola plasma membrane 36.96 30.72
CDY50654 Canola plasma membrane 36.96 30.66
CDY51758 Canola plasma membrane 36.96 30.66
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 39.86 30.39
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 39.86 30.39
CDY21177 Canola plasma membrane 36.47 30.32
CDY54720 Canola plasma membrane 40.58 29.89
CDY08797 Canola plasma membrane 39.86 29.2
CDY33962 Canola plasma membrane 21.98 28.44
CDY08798 Canola cytosol, peroxisome, plasma membrane 21.74 28.04
CDY14558 Canola plasma membrane 21.74 27.95
CDX92726 Canola nucleus, peroxisome, plasma membrane 39.86 27.59
CDY70471 Canola cytosol, peroxisome, plasma membrane 20.05 27.39
CDY50190 Canola nucleus, peroxisome, plasma membrane 39.86 27.36
CDY38453 Canola plasma membrane 26.09 27.14
CDY16896 Canola plasma membrane 31.88 26.61
CDX84047 Canola plasma membrane 38.41 22.59
CDX69836 Canola plasma membrane 39.86 16.08
Protein Annotations
EnsemblPlants:CDX94064EnsemblPlantsGene:GSBRNA2T00156962001GO:A0A078E074GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF140PFAM:PF01554ProteinID:CDX94064
ProteinID:CDX94064.1TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EEA28AMapMan:24.2.4.1.1:
Description
BnaC07g36980D
Coordinates
chrLK031879:-:408973..410668
Molecular Weight (calculated)
45614.5 Da
IEP (calculated)
8.798
GRAVY (calculated)
0.720
Length
414 amino acids
Sequence
(BLAST)
001: MGSAVETLCG QAYGAHRYDM LGIYFQRATI VLALVGLPMT VLYTFSYPVL LVLGEPKMVS YMGSLYIVGL MPQIFAYAVN FTAQKFLQAQ SVVTPSAYIS
101: AAALFLQISL TWMAVNMMGL GLMGIAYVLT ISWWVIGVAQ ILYITSSQRF RHTWTGLSWR SFHGLWSFFK HSVGSAVMIC LEMWYSQILV LLAGLLKEPA
201: LSLDSLSICM SVSALSFMVS VGFNAAASIR TSNELGAGNP KSALFSAWTA TFVSFVISLA EALAVIASRD YISYIFTSEA DVAKAVSDLC PFLAVTIILN
301: GIQPVFSGVA VGCGWQTFVA YVNVGCYYII GIPVGCILGF AFNFQAKGIW TGMIGGTLMQ TLILLYVTYR TDWDKEVSIT WKKRESDWIC GTIRNLFKIK
401: RVMDFMKNVI YVSK
Best Arabidopsis Sequence Match ( AT4G21903.1 )
(BLAST)
001: MNGSNETVER RIELRRPLVD TEKKLPLEVG LESVLTESSL PYRRRVYLGM CIELKLLLRL ALPAILVYLI NGGMGISARI FAGHLGSTQL AAASIGNSSF
101: SLVYALMLGM GSAVETLCGQ AYGAHRYEML GIYLQRATIV LALVGFPMTI LYTFSYPILL LLGEPKTVSY MGSLYIAGLI PQIFAYAVYF TAQKFLQAQS
201: VVAPSAYISA AALVLQISLT WITVYAMGQG LMGIAYVLTI SWWFIVGAQT FYVITSVRFK DTWTGFSWKS LHGLWSFFKL SAGSAVMICL ELWYTQILVL
301: LAGLLKDPAL SLDSLSICMS ISALSFMVSV GFNAAVSVRT SNELGAGNPK SALFSTWTAT FVSFVISVVE ALVVIASRDN VSYIFTSDAD VAKAVSDLCP
401: FLAVTIILNG IQPVLSGVAV GCGWQTYVAY VNIGCYYIVG IPIGCILGFT FNFQAKGIWT GMIGGTLMQT LILLYVTYQA DWDKEVEKAR KRLDMWDDKE
501: PLQN
Arabidopsis Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F4JKB8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.