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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27434 Canola plasma membrane 91.35 90.44
CDX76391 Canola plasma membrane 91.15 90.24
CDX98713 Canola plasma membrane 78.87 86.15
CDX98712 Canola plasma membrane 86.32 84.62
CDX94063 Canola plasma membrane 85.92 84.22
CDX98711 Canola peroxisome, plasma membrane, vacuole 85.51 83.83
CDX94061 Canola peroxisome, plasma membrane, vacuole 85.11 83.43
CDY27431 Canola plasma membrane 83.9 82.25
CDX76392 Canola plasma membrane 75.25 81.13
CDX94064 Canola plasma membrane 67.0 80.43
CDY07257 Canola endoplasmic reticulum, vacuole 43.86 66.67
CDY33131 Canola golgi, plasma membrane, vacuole 23.14 65.34
CDY47166 Canola plasma membrane 64.99 64.47
CDY25329 Canola plasma membrane 64.79 64.27
CDY19507 Canola cytosol, plasma membrane, vacuole 64.19 63.67
CDY34637 Canola plasma membrane 58.75 63.62
CDY12916 Canola cytosol, plasma membrane, vacuole 63.98 63.47
CDY34833 Canola plasma membrane 58.55 63.4
CDY64933 Canola plasma membrane 64.19 63.17
VIT_10s0116g01880.t01 Wine grape plasma membrane 63.78 62.28
Solyc02g080480.2.1 Tomato cytosol, plasma membrane, vacuole 61.17 60.92
VIT_10s0116g01870.t01 Wine grape plastid 61.77 60.2
KRH11419 Soybean plasma membrane 60.16 59.21
CDY33129 Canola cytosol, peroxisome, plasma membrane 59.96 59.01
CDX92916 Canola cytosol, plasma membrane, vacuole 59.15 58.22
CDY38631 Canola cytosol, peroxisome, vacuole 59.76 58.01
PGSC0003DMT400042439 Potato cytosol, plasma membrane, vacuole 61.17 57.58
CDY39494 Canola cytosol, peroxisome, plasma membrane 59.36 57.39
CDY65669 Canola cytosol, peroxisome, plasma membrane 57.14 57.37
CDY39493 Canola cytosol, peroxisome, plasma membrane 57.95 57.26
CDY19294 Canola cytosol, peroxisome, plasma membrane 59.15 57.2
CDY64820 Canola plasma membrane 59.15 56.32
CDY33130 Canola cytosol, peroxisome, vacuole 34.81 56.17
CDY69153 Canola cytosol, peroxisome, plasma membrane 35.21 55.2
CDY24250 Canola cytosol, peroxisome, plasma membrane 35.01 54.89
CDY19295 Canola cytosol, peroxisome, plasma membrane 31.79 51.97
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 17.1 46.2
CDY01224 Canola plasma membrane 30.99 45.7
CDX83628 Canola plasma membrane 35.01 44.27
CDY44967 Canola plasma membrane 35.41 43.78
CDY06731 Canola cytosol, peroxisome, plasma membrane 42.05 43.18
CDY17070 Canola cytosol, peroxisome, plasma membrane 41.85 42.98
CDY13643 Canola cytosol, peroxisome, plasma membrane 43.46 42.94
CDX67772 Canola plasma membrane 43.66 42.8
CDX98344 Canola plasma membrane 43.66 42.8
CDX83627 Canola cytosol, peroxisome, plasma membrane 43.26 42.74
Bra013572.1-P Field mustard golgi 87.93 42.59
CDY34598 Canola cytosol, peroxisome, vacuole 44.47 42.58
CDX69834 Canola plasma membrane 40.44 42.23
CDX97005 Canola plasma membrane 41.05 41.89
CDY26602 Canola cytosol, peroxisome, vacuole 43.66 41.81
CDX81176 Canola plasma membrane 41.05 41.8
CDX78379 Canola peroxisome, plasma membrane, vacuole 38.83 41.77
CDY21076 Canola cytosol, peroxisome, plasma membrane 43.46 41.62
CDY16041 Canola cytosol, peroxisome, vacuole 43.46 41.62
CDX69835 Canola plasma membrane 40.64 41.48
CDX93794 Canola plasma membrane 41.05 41.38
CDY40095 Canola plasma membrane 40.44 41.27
CDX81281 Canola plasma membrane 40.04 41.12
CDX85764 Canola plasma membrane 41.25 41.0
CDX81172 Canola plasma membrane 39.84 40.82
CDX97001 Canola plasma membrane 40.24 40.73
CDX78378 Canola plasma membrane 39.64 40.62
CDY40093 Canola plasma membrane 40.44 40.04
CDX81174 Canola plasma membrane 32.39 39.66
CDX89406 Canola plasma membrane 40.64 39.45
CDX94432 Canola plasma membrane 40.24 39.14
CDY08798 Canola cytosol, peroxisome, plasma membrane 24.55 38.01
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 41.45 37.94
CDY14558 Canola plasma membrane 24.55 37.89
CDY33962 Canola plasma membrane 24.35 37.81
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 41.25 37.75
CDY51758 Canola plasma membrane 37.63 37.47
CDY08796 Canola plasma membrane 40.85 37.45
CDY49481 Canola plasma membrane 32.8 37.3
CDY29945 Canola plasma membrane 37.22 37.15
CDY21177 Canola plasma membrane 37.22 37.15
CDY50654 Canola plasma membrane 37.22 37.07
CDY61495 Canola plasma membrane 40.64 37.06
CDY70471 Canola cytosol, peroxisome, plasma membrane 21.93 35.97
CDY54720 Canola plasma membrane 40.44 35.77
CDY38453 Canola plasma membrane 27.97 34.92
CDY08797 Canola plasma membrane 38.63 33.98
CDY16896 Canola plasma membrane 32.8 32.86
CDX92726 Canola nucleus, peroxisome, plasma membrane 39.44 32.78
CDY50190 Canola nucleus, peroxisome, plasma membrane 39.24 32.34
CDX84047 Canola plasma membrane 38.03 26.85
CDX69836 Canola plasma membrane 39.84 19.3
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078CSW8EnsemblPlants:CDX79109ProteinID:CDX79109ProteinID:CDX79109.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00131653001InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF140TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EED1CFSEG:seg
Description
BnaA01g11760D
Coordinates
chrLK031816:-:1819202..1822819
Molecular Weight (calculated)
54340.0 Da
IEP (calculated)
7.275
GRAVY (calculated)
0.637
Length
497 amino acids
Sequence
(BLAST)
001: MDASYETTER TDLLQPLVDQ KPPSDVGLES VLTESSLPYR RRVYLGACIE MKLLFRLALP AILVYIVNSG MNISARIFAG HIGGKELAAA SIGNSCFSLA
101: YGLMLGMGSA VETLCGQAHG AHRYDMLGIY LQRATIVLAL VGLPLTLLYT FSYPILVLLG EPKSVSYMAS MYIAALIPQI FAYAVNFTAQ KFLQAQSVVT
201: PSAYISAAAF LLQTVLTWVT VYVMGLGLMG IAYVLTISWW LIVVAQTLYI TSSQRFRHTW TGLSWRSFQG LWSFFKLSAG SAVMICLEMW YSQILVLLAG
301: LLKDPALSLD SLSICMSISA LSFMVSVGFN AAASVRTSNE LGAGNPKSAL FSTWMATFVS FVISVVEALA VMVSREYVSY IFTADDEVAK AVSDLCPFLA
401: VTIILNGIQP VLSGVAVGCG WQTFVAYVNV GCYYIVGIPV GCLLGFTFNF QAKGIWTGMI GGTLMQTLIL LYVTYRTDWD KEVEKANKRL DMWDDKK
Best Arabidopsis Sequence Match ( AT4G21910.2 )
(BLAST)
001: MEVPSETTNL ADLRRPLVVP VVSERKPPAD VGLGLESVLT ERSLPYRRRV YLGACIEMKL LFRLALPAIL VYLVNSGMGI SARIFAGHLG KNELAAASIG
101: NSCFSLVYGL MLGMGSAVET LCGQAYGAHR YEMLGIYLQR ATIVLALVGL PMTLLYTFSY PILILLGEPK TVSYMGSKYI AGLIPQIFAY AVNFTAQKFL
201: QAQSVVAPSA FISAAALILQ ILLTWITVYV MDMGFMGIAY VLTISWWVIV GSQCFYIAVS PKFRHTWTGL SWRSLQGLWS FFKLSAGSAV MICLEMWYSQ
301: ILVLLAGLLE NPARSLDSLS ICMSISALSF MVSVGFNAAV SVRTSNELGA GNPKSAWFST WTATFVSFVI SVTEALAVIW FRDYVSYIFT EDADVAKAVS
401: DLCPFLAITI ILNGIQPVLS GVAVGCGWQT YVAYVNVGCY YVVGIPVGCI LGFTFDFQAK GIWTGMIGGT LMQTLILLYV TYRTDWDKEV EKARKRLDLW
501: DDKKEPLQN
Arabidopsis Description
MATE efflux family protein [Source:TAIR;Acc:AT4G21910]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.