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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010453.1-P Field mustard plasma membrane 97.25 87.09
AT4G25640.2 Thale cress plasma membrane 76.43 64.98
CDX94432 Canola plasma membrane 74.83 63.99
CDX89406 Canola plasma membrane 74.6 63.67
CDX92726 Canola nucleus, peroxisome, plasma membrane 75.74 55.35
VIT_16s0050g00910.t01 Wine grape plasma membrane 61.1 54.6
CDY50190 Canola nucleus, peroxisome, plasma membrane 75.29 54.56
VIT_16s0050g00900.t01 Wine grape plasma membrane 59.04 52.76
Solyc03g025240.1.1 Tomato plasma membrane 47.83 52.38
KRG91572 Soybean vacuole 58.58 51.82
VIT_16s0050g00930.t01 Wine grape plasma membrane 58.35 51.72
GSMUA_Achr7P04510_001 Banana plasma membrane 46.91 51.51
PGSC0003DMT400026355 Potato plasma membrane 59.27 51.39
KRH35253 Soybean plasma membrane 57.89 51.21
Solyc03g025230.2.1 Tomato plasma membrane 58.12 50.8
Solyc06g036130.2.1 Tomato plasma membrane 58.58 50.79
PGSC0003DMT400076953 Potato plasma membrane 58.35 50.4
Solyc03g025190.2.1 Tomato plasma membrane 58.35 50.4
Solyc03g025200.2.1 Tomato plasma membrane 54.46 50.11
Solyc03g025250.2.1 Tomato plasma membrane 56.29 49.1
PGSC0003DMT400026353 Potato plasma membrane 54.69 47.51
Os08t0562800-01 Rice peroxisome, plasma membrane, vacuole 48.51 47.01
GSMUA_Achr1P15340_001 Banana plasma membrane 51.03 46.95
GSMUA_AchrUn_... Banana golgi, peroxisome, vacuole 54.23 46.84
TraesCS7A01G482100.1 Wheat plasma membrane 50.57 46.14
TraesCS7D01G469000.1 Wheat plasma membrane 50.34 46.12
HORVU6Hr1G091840.1 Barley plasma membrane 52.4 45.62
CDY07225 Canola cytosol, peroxisome, plasma membrane, plastid 56.52 45.49
CDY66203 Canola cytosol, peroxisome, plasma membrane, plastid 56.52 45.49
TraesCS7B01G384300.1 Wheat plasma membrane 49.43 45.28
TraesCS7D01G130700.1 Wheat plasma membrane 49.2 45.17
TraesCS7B01G137200.1 Wheat plasma membrane 49.43 45.09
TraesCS6B01G440300.1 Wheat plasma membrane 51.95 45.04
TraesCS7A01G241600.1 Wheat plasma membrane 49.2 44.89
TraesCS7D01G240600.1 Wheat plasma membrane 49.2 44.89
TraesCS6A01G400100.1 Wheat plasma membrane 51.95 44.77
TraesCS6D01G384300.1 Wheat plasma membrane 51.72 44.58
TraesCS7B01G032100.1 Wheat plasma membrane 48.74 44.47
HORVU6Hr1G091850.2 Barley peroxisome, plasma membrane, vacuole 51.72 44.4
TraesCS7A01G131500.2 Wheat plasma membrane 48.28 44.33
TraesCS7B01G032300.1 Wheat plasma membrane 48.28 44.33
TraesCS7D01G130800.1 Wheat plasma membrane 48.28 44.33
OQU85979 Sorghum cytosol, peroxisome, vacuole 51.26 44.18
TraesCS7A01G131600.1 Wheat plasma membrane 48.05 44.12
OQU85978 Sorghum plasma membrane 41.88 44.1
KRH08881 Soybean plasma membrane 47.83 43.82
TraesCS2B01G612900.1 Wheat plasma membrane 48.05 43.75
KRH38402 Soybean plasma membrane 48.28 43.24
KRH08883 Soybean plasma membrane 48.05 43.03
HORVU0Hr1G022320.1 Barley plasma membrane 47.37 42.77
KRH38403 Soybean plasma membrane 47.6 42.62
Solyc03g025220.2.1 Tomato plasma membrane 49.2 42.57
Os02t0821600-00 Rice plasma membrane 47.83 42.57
TraesCS6A01G400200.1 Wheat cytosol, peroxisome, plasma membrane 53.09 41.5
TraesCS6B01G440400.1 Wheat cytosol, peroxisome, plasma membrane 53.09 41.5
TraesCS6D01G384400.1 Wheat plastid 52.63 41.29
OQU80697 Sorghum cytosol 49.89 40.98
CDY06731 Canola cytosol, peroxisome, plasma membrane 44.39 40.08
CDY17070 Canola cytosol, peroxisome, plasma membrane 44.39 40.08
CDY70471 Canola cytosol, peroxisome, plasma membrane 26.77 38.61
HORVU7Hr1G049240.3 Barley peroxisome 48.74 38.52
CDY08798 Canola cytosol, peroxisome, plasma membrane 28.15 38.32
CDY14558 Canola plasma membrane 28.15 38.2
CDY33962 Canola plasma membrane 27.23 37.19
CDX83628 Canola plasma membrane 33.18 36.9
CDY16041 Canola cytosol, peroxisome, vacuole 43.71 36.8
CDY26602 Canola cytosol, peroxisome, vacuole 43.71 36.8
CDX83627 Canola cytosol, peroxisome, plasma membrane 42.11 36.58
CDY13643 Canola cytosol, peroxisome, plasma membrane 42.11 36.58
CDY21076 Canola cytosol, peroxisome, plasma membrane 43.25 36.42
CDY34598 Canola cytosol, peroxisome, vacuole 43.25 36.42
CDX78379 Canola peroxisome, plasma membrane, vacuole 38.22 36.15
CDX97005 Canola plasma membrane 40.05 35.93
CDX81176 Canola plasma membrane 40.05 35.86
CDX69835 Canola plasma membrane 39.82 35.73
CDX81281 Canola plasma membrane 39.36 35.54
Zm00001d049910_P001 Maize cytosol, peroxisome, plasma membrane 48.28 35.46
CDY24250 Canola cytosol, peroxisome, plasma membrane 25.63 35.33
CDY69153 Canola cytosol, peroxisome, plasma membrane 25.63 35.33
CDY01224 Canola plasma membrane 27.0 35.01
CDY07257 Canola endoplasmic reticulum, vacuole 26.09 34.86
CDX69834 Canola plasma membrane 37.76 34.66
CDX78378 Canola plasma membrane 38.44 34.64
CDX81172 Canola plasma membrane 38.44 34.64
CDY40095 Canola plasma membrane 38.22 34.29
CDY33130 Canola cytosol, peroxisome, vacuole 24.03 34.09
CDY40093 Canola plasma membrane 39.13 34.06
CDX94064 Canola plasma membrane 32.27 34.06
CDX85764 Canola plasma membrane 38.9 34.0
CDX93794 Canola plasma membrane 38.22 33.87
CDY64933 Canola plasma membrane 39.13 33.86
CDX76392 Canola plasma membrane 35.7 33.84
CDY44967 Canola plasma membrane 31.12 33.83
CDY34637 Canola plasma membrane 35.47 33.77
CDY34833 Canola plasma membrane 35.47 33.77
CDY19507 Canola cytosol, plasma membrane, vacuole 38.67 33.73
CDY25329 Canola plasma membrane 38.67 33.73
CDY47166 Canola plasma membrane 38.67 33.73
CDY38453 Canola plasma membrane 30.66 33.67
CDY33129 Canola cytosol, peroxisome, plasma membrane 38.9 33.66
CDY38631 Canola cytosol, peroxisome, vacuole 39.36 33.59
CDY12916 Canola cytosol, plasma membrane, vacuole 38.44 33.53
CDX97001 Canola plasma membrane 37.3 33.2
CDX98711 Canola peroxisome, plasma membrane, vacuole 38.44 33.14
CDY19294 Canola cytosol, peroxisome, plasma membrane 38.9 33.07
CDY39494 Canola cytosol, peroxisome, plasma membrane 38.9 33.07
CDX92916 Canola cytosol, plasma membrane, vacuole 38.22 33.07
CDY19295 Canola cytosol, peroxisome, plasma membrane 22.88 32.89
CDY39493 Canola cytosol, peroxisome, plasma membrane 37.76 32.8
CDX79109 Canola plasma membrane 37.3 32.8
CDY64820 Canola plasma membrane 39.13 32.76
CDX94061 Canola peroxisome, plasma membrane, vacuole 37.76 32.54
CDY65669 Canola cytosol, peroxisome, plasma membrane 36.84 32.53
Zm00001d051886_P001 Maize cytosol, peroxisome, plasma membrane 51.49 32.51
CDY08796 Canola plasma membrane 40.27 32.47
CDX76391 Canola plasma membrane 37.3 32.47
CDY27434 Canola plasma membrane 37.07 32.27
CDY61495 Canola plasma membrane 40.05 32.11
CDX98713 Canola plasma membrane 33.18 31.87
KRH38401 Soybean plasma membrane 37.76 31.61
CDY69605 Canola endoplasmic reticulum, plasma membrane, vacuole 13.27 31.52
CDX94063 Canola plasma membrane 36.38 31.36
CDX98712 Canola plasma membrane 36.38 31.36
CDY33131 Canola golgi, plasma membrane, vacuole 12.59 31.25
CDY08797 Canola plasma membrane 40.27 31.15
CDY54720 Canola plasma membrane 39.59 30.78
CDY27431 Canola plasma membrane 35.7 30.77
CDX81174 Canola plasma membrane 28.38 30.54
CDY21177 Canola plasma membrane 33.87 29.72
CDY29945 Canola plasma membrane 33.87 29.72
CDY51758 Canola plasma membrane 33.87 29.66
CDY50654 Canola plasma membrane 33.64 29.46
CDX98344 Canola plasma membrane 33.87 29.19
CDX67772 Canola plasma membrane 33.64 28.99
CDY16896 Canola plasma membrane 31.12 27.42
CDX84047 Canola plasma membrane 38.22 23.72
CDX69836 Canola plasma membrane 39.82 16.96
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078IHL5UniProt:A0A078IHL5EnsemblPlants:CDY49481ProteinID:CDY49481ProteinID:CDY49481.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00093137001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF184TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0004EF17D4:::::
Description
BnaCnng17470DBnaCnng17470D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078IHL5]
Coordinates
chrLK032835:+:115946..118612
Molecular Weight (calculated)
47538.1 Da
IEP (calculated)
4.686
GRAVY (calculated)
0.968
Length
437 amino acids
Sequence
(BLAST)
001: MDPRTPFLAN GGEAEEDYAP ARTWSDVKIV LSTESGKLWM FACMVAFDAI CQFGVSFMTI VFVGHIGEIE LSAVSISLSV IGIFSFGFLL GMSSALETLC
101: SQAFGAGEVN KLGIYMQRAW IISLVSCLVF LPIYIFATPV LRLLGESEEV AVSAGEFTLL TIPQLFSLAF TFPATKFLIA QGKVVVMTSI GFSALVIHIF
201: MLWLFIIAFG WGTNGAALAF NITNWGTAIS LIVYVVVWCN EGWSGLSWLA FSDIWAFVRL SIESAVMICL ELWYMMSIIV LSGRLDNDVI AVDSLSICLN
301: VNNVELMLFV GVNIAISMIV GTELGKGRPR AAKYSVYVAL FESLIIGLVF MVAVIIARDH FAIMFTNSQV LQRAVSKLAY LLGITMVLNG VQQVLTGVAI
401: GGGWQRTVAY INVACYFIFG IPFGYSLGYG ANLGVMV
Best Arabidopsis Sequence Match ( AT4G25640.3 )
(BLAST)
001: MDPTAPLLTH GGEVEEDYAP ARSWTDVKRV LSTESAKLWM IAAPVGFNII CQYGVSSVTN IFVGHIGEVE LSAVSISLSV IGTFSFGFLL GMGSALETLC
101: GQAYGAGQVN MLGVYMQRSW IILFVSCFFL LPIYIFATPV LRLLGQAEEI AVPAGQFTLL TIPQLFSLAF NFPTSKFLQA QSKVVAIAWI GFVALSLHVI
201: MLWLFIIEFG WGTNGAALAF NITNWGTAIA QIVYVIGWCN EGWTGLSWLA FKEIWAFVRL SIASAVMLCL EIWYMMSIIV LTGRLDNAVI AVDSLSICMN
301: INGLEAMLFI GINAAISVRV SNELGLGRPR AAKYSVYVTV FQSLLIGLVF MVAIIIARDH FAIIFTSSKV LQRAVSKLAY LLGITMVLNS VQPVVSGVAV
401: GGGWQGLVAY INLGCYYIFG LPFGYLLGYI ANFGVMVREF RKWHELSQLM LKLKLMYNVF RDFGLE
Arabidopsis Description
ATDTX35Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F4JTB2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.